RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W RSM25P40496 264 aa1.9□□□□□ -2.11
UBC9YDL064W YRB1P41920 201 aaKnown RBP1.9□□□□□ -2.11
UBC9YDL064W YFR054CP43622 192 aa1.9□□□□□ -2.11
UBC9YDL064W AIF1P52923 378 aa1.9□□□□□ -2.11
UBC9YDL064W SNZ1Q03148 297 aa1.9□□□□□ -2.11
UBC9YDL064W YHR214C-EQ8TGK0 99 aa1.9□□□□□ -2.11
UBC9YDL064W MEI4P29467 408 aa1.89□□□□□ -2.11
UBC9YDL064W TCA17P32613 152 aa1.89□□□□□ -2.11
UBC9YDL064W UTP30P36144 274 aaKnown RBP1.89□□□□□ -2.11
UBC9YDL064W PEP8P40335 379 aa1.89□□□□□ -2.11
UBC9YDL064W YRB2P40517 327 aa1.89□□□□□ -2.11
UBC9YDL064W AGE2P40529 298 aa1.89□□□□□ -2.11
UBC9YDL064W RPL33BP41056 107 aaKnown RBP1.89□□□□□ -2.11
UBC9YDL064W ERG25P53045 309 aa1.89□□□□□ -2.11
UBC9YDL064W PRM8P53174 237 aa1.89□□□□□ -2.11
UBC9YDL064W PDR17P53844 350 aa1.89□□□□□ -2.11
UBC9YDL064W YML108WQ03759 105 aa1.89□□□□□ -2.11
UBC9YDL064W CDC7P06243 507 aa1.88□□□□□ -2.11
UBC9YDL064W GCN3P14741 305 aa1.88□□□□□ -2.11
UBC9YDL064W SPS18P32572 300 aa1.88□□□□□ -2.11
UBC9YDL064W SEC17P32602 292 aa1.88□□□□□ -2.11
UBC9YDL064W MCP1Q12106 302 aa1.88□□□□□ -2.11
UBC9YDL064W USB1Q12208 290 aaKnown RBP1.88□□□□□ -2.11
UBC9YDL064W NCB2Q92317 146 aa1.88□□□□□ -2.11
UBC9YDL064W IDH1P28834 360 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
UBC9YDL064W PGD1P40356 397 aa1.87□□□□□ -2.11
UBC9YDL064W BNA7Q04066 261 aa1.87□□□□□ -2.11
UBC9YDL064W TUS1Q06412 1307 aa1.87□□□□□ -2.11
UBC9YDL064W SEC4P07560 215 aaKnown RBP1.86□□□□□ -2.11
UBC9YDL064W RPL27BP0C2H7 136 aaKnown RBP1.86□□□□□ -2.11
UBC9YDL064W YKT6P36015 200 aaKnown RBP1.86□□□□□ -2.11
UBC9YDL064W MRPL28P36527 147 aa1.86□□□□□ -2.11
UBC9YDL064W DSE2P38844 325 aa1.86□□□□□ -2.11
UBC9YDL064W ICE2P40499 491 aa1.86□□□□□ -2.11
UBC9YDL064W TIR3P40552 269 aa1.86□□□□□ -2.11
UBC9YDL064W IRC18P47056 224 aa1.86□□□□□ -2.11
UBC9YDL064W BOL2P53082 120 aa1.86□□□□□ -2.11
UBC9YDL064W YGR050CP53231 118 aa1.86□□□□□ -2.11
UBC9YDL064W YNR077CP53758 84 aa1.86□□□□□ -2.11
UBC9YDL064W SWP1Q02795 286 aa1.86□□□□□ -2.11
UBC9YDL064W GRX3Q03835 250 aa1.86□□□□□ -2.11
UBC9YDL064W YFR032C-BQ8TGU2 87 aa1.86□□□□□ -2.11
UBC9YDL064W TIM9O74700 87 aa1.85□□□□□ -2.11
UBC9YDL064W MDH2P22133 377 aa1.85□□□□□ -2.11
UBC9YDL064W RFA3P26755 122 aaKnown RBP1.85□□□□□ -2.11
UBC9YDL064W NTG1P31378 399 aa1.85□□□□□ -2.11
UBC9YDL064W PTM1P32857 523 aa1.85□□□□□ -2.11
UBC9YDL064W MRPL17P36528 281 aa1.85□□□□□ -2.11
UBC9YDL064W DOC1P53068 250 aa1.85□□□□□ -2.11
UBC9YDL064W SML1Q04964 104 aa1.85□□□□□ -2.11
UBC9YDL064W YOL160WQ08321 113 aa1.85□□□□□ -2.11
UBC9YDL064W YPL162CQ12042 273 aa1.85□□□□□ -2.11
UBC9YDL064W RPB4P20433 221 aaPredicted RBP1.84□□□□□ -2.11
UBC9YDL064W MRPS28P21771 286 aa1.84□□□□□ -2.11
UBC9YDL064W SVP26P38869 228 aa1.84□□□□□ -2.11
UBC9YDL064W IKI1P38874 309 aa1.84□□□□□ -2.11
UBC9YDL064W YCL012CQ8J0M4 134 aa1.84□□□□□ -2.11
UBC9YDL064W PDR18P53756 1333 aa1.84□□□□□ -2.12
UBC9YDL064W MER1P16523 270 aa1.83□□□□□ -2.12
UBC9YDL064W CBF1P17106 351 aa1.83□□□□□ -2.12
UBC9YDL064W MGM101P32787 269 aaKnown RBP1.83□□□□□ -2.12
UBC9YDL064W YBR219CP38317 127 aa1.83□□□□□ -2.12
UBC9YDL064W RMD6P39975 231 aa1.83□□□□□ -2.12
UBC9YDL064W YRA1Q12159 226 aaKnown RBP1.83□□□□□ -2.12
UBC9YDL064W HTB1P02293 131 aaKnown RBP1.82□□□□□ -2.12
UBC9YDL064W HTB2P02294 131 aa1.82□□□□□ -2.12
UBC9YDL064W SKG1P36169 355 aa1.82□□□□□ -2.12
UBC9YDL064W YCR087C-AP37263 153 aa1.82□□□□□ -2.12
UBC9YDL064W AST2P39945 430 aaKnown RBP1.82□□□□□ -2.12
UBC9YDL064W AVT2P39981 480 aa1.82□□□□□ -2.12
UBC9YDL064W VTC1P40046 129 aaRIP-Chip data1.82□□□□□ -2.12not detected
UBC9YDL064W YNL217WP40152 326 aa1.82□□□□□ -2.12
UBC9YDL064W EAF6P47128 113 aa1.82□□□□□ -2.12
UBC9YDL064W BEM2P39960 2167 aaKnown RBP1.82□□□□□ -2.12
UBC9YDL064W MATALPHA2P0CY08 210 aa1.81□□□□□ -2.12
UBC9YDL064W HMLALPHA2P0CY09 210 aa1.81□□□□□ -2.12
UBC9YDL064W KSS1P14681 368 aa1.81□□□□□ -2.12
UBC9YDL064W FZF1P32805 299 aa1.81□□□□□ -2.12
UBC9YDL064W UMP1P38293 148 aa1.81□□□□□ -2.12
UBC9YDL064W GVP36P40531 326 aaKnown RBP1.81□□□□□ -2.12
UBC9YDL064W LSM7P53905 115 aaKnown RBP1.81□□□□□ -2.12
UBC9YDL064W YDR249CQ03787 373 aa1.81□□□□□ -2.12
UBC9YDL064W TSC3Q3E790 80 aa1.81□□□□□ -2.12
UBC9YDL064W FLO9P39712 1322 aa1.81□□□□□ -2.12
UBC9YDL064W CPA1P07258 411 aaKnown RBP1.8□□□□□ -2.12
UBC9YDL064W CUS2P53830 285 aaPredicted RBP1.8□□□□□ -2.12
UBC9YDL064W COG5P53951 403 aa1.8□□□□□ -2.12
UBC9YDL064W BUD25P85052 153 aa1.8□□□□□ -2.12
UBC9YDL064W CSI2Q08054 341 aa1.8□□□□□ -2.12
UBC9YDL064W YNG1Q08465 219 aa1.8□□□□□ -2.12
UBC9YDL064W ADF1Q2V2Q1 113 aa1.8□□□□□ -2.12
UBC9YDL064W ATP15P21306 62 aa1.79□□□□□ -2.12
UBC9YDL064W YET1P35723 206 aa1.79□□□□□ -2.12
UBC9YDL064W GLE2P40066 365 aa1.79□□□□□ -2.12
UBC9YDL064W YER135CP40082 130 aa1.79□□□□□ -2.12
UBC9YDL064W AIM25P47140 327 aa1.79□□□□□ -2.12
UBC9YDL064W CWC21Q03375 135 aaKnown RBP1.79□□□□□ -2.12
UBC9YDL064W YIL177CP40434 1758 aa1.78□□□□□ -2.12
UBC9YDL064W YJL225CP40889 1758 aa1.78□□□□□ -2.12
UBC9YDL064W RPB3P16370 318 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 95.7 ms