RNA–Protein interactions for RNA: YDL023C

YDL023C, Transcript of Dubious open reading frame, yeast

Gene YDL023C, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL023C	YDL023C	SFC1	P33303	322 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	RPS20	P38701	121 aa	Known RBP	4.91	□□□□□ -1.62
YDL023C	YDL023C	EDC2	P40023	145 aa	Predicted RBP	4.91	□□□□□ -1.62
YDL023C	YDL023C	YER186C	P40101	306 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	YIL012W	P40551	113 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	CFD1	P40558	293 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	SNO3	P43544	222 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	ARO8	P53090	500 aa	Known RBP	4.91	□□□□□ -1.62
YDL023C	YDL023C	YGR050C	P53231	118 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	COF1	Q03048	143 aa	Known RBP	4.91	□□□□□ -1.62
YDL023C	YDL023C	VHS1	Q03785	461 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	YMR254C	Q04838	102 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	ERP1	Q05359	219 aa	Known RBP	4.91	□□□□□ -1.62
YDL023C	YDL023C	TIR4	Q12218	487 aa	Predicted RBP	4.91	□□□□□ -1.62
YDL023C	YDL023C	IES3	Q12345	250 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	PDR18	P53756	1333 aa		4.91	□□□□□ -1.62
YDL023C	YDL023C	TRP1	P00912	224 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	RPL15A	P05748	204 aa	Known RBP	4.9	□□□□□ -1.63
YDL023C	YDL023C	MRS3	P10566	314 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	CNB1	P25296	175 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	OMA1	P36163	345 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	OST2	P46964	130 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	PGA1	P53896	198 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	YNL010W	P53981	241 aa	Known RBP	4.9	□□□□□ -1.63
YDL023C	YDL023C	RPL15B	P54780	204 aa	Predicted RBP	4.9	□□□□□ -1.63
YDL023C	YDL023C	APS2	Q00381	147 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	CWC27	Q02770	301 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	CNL1	Q06333	122 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	PRR2	Q12310	699 aa		4.9	□□□□□ -1.63
YDL023C	YDL023C	SPO13	P23624	291 aa		4.89	□□□□□ -1.63
YDL023C	YDL023C	STP22	P25604	385 aa		4.89	□□□□□ -1.63
YDL023C	YDL023C	SUI1	P32911	108 aa	Known RBP	4.89	□□□□□ -1.63
YDL023C	YDL023C	PAN3	P36102	679 aa	Predicted RBP	4.89	□□□□□ -1.63
YDL023C	YDL023C	PHO89	P38361	574 aa		4.89	□□□□□ -1.63
YDL023C	YDL023C	YHI9	P38765	294 aa		4.89	□□□□□ -1.63
YDL023C	YDL023C	AST2	P39945	430 aa	Known RBP	4.89	□□□□□ -1.63
YDL023C	YDL023C	YIL024C	P40543	189 aa		4.89	□□□□□ -1.63
YDL023C	YDL023C	DIM1	P41819	318 aa	Known RBP	4.89	□□□□□ -1.63
YDL023C	YDL023C	BIR1	P47134	954 aa		4.89	□□□□□ -1.63
YDL023C	YDL023C	HHO1	P53551	258 aa		4.89	□□□□□ -1.63
YDL023C	YDL023C	ATX2	Q12067	313 aa		4.89	□□□□□ -1.63
YDL023C	YDL023C	CPR1	P14832	162 aa	Known RBP	4.88	□□□□□ -1.63
YDL023C	YDL023C	RPC19	P28000	142 aa	Known RBP	4.88	□□□□□ -1.63
YDL023C	YDL023C	MRP49	P32388	137 aa		4.88	□□□□□ -1.63
YDL023C	YDL023C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
YDL023C	YDL023C	SMP1	P38128	452 aa		4.88	□□□□□ -1.63
YDL023C	YDL023C	AYT1	Q12226	474 aa		4.88	□□□□□ -1.63
YDL023C	YDL023C	TSC3	Q3E790	80 aa		4.88	□□□□□ -1.63
YDL023C	YDL023C	TDA8	Q6B2U8	126 aa		4.88	□□□□□ -1.63
YDL023C	YDL023C	BGL2	P15703	313 aa	Known RBP	4.87	□□□□□ -1.63
YDL023C	YDL023C	CKS1	P20486	150 aa	Known RBP	4.87	□□□□□ -1.63
YDL023C	YDL023C	PRE7	P23724	241 aa	Known RBP	4.87	□□□□□ -1.63
YDL023C	YDL023C	YPT53	P36019	220 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	YBR063C	P38083	404 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	YPL073C	P40323	161 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	AYR1	P40471	297 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	YFL067W	P43537	175 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	ARP3	P47117	449 aa	Known RBP	4.87	□□□□□ -1.63
YDL023C	YDL023C	YJR085C	P47131	105 aa	Known RBP	4.87	□□□□□ -1.63
YDL023C	YDL023C	ORM1	P53224	222 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	YDR366C	P87287	132 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	SAE3	P89114	91 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	YMR253C	Q04835	414 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	YOR376W	Q08900	122 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	YPR011C	Q12251	326 aa		4.87	□□□□□ -1.63
YDL023C	YDL023C	RPL30	P14120	105 aa	Known RBP	4.86	□□□□□ -1.63
YDL023C	YDL023C	ERG2	P32352	222 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	TIM17	P39515	158 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	DLS1	P40366	167 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	UFD1	P53044	361 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	ACT1	P60010	375 aa	Known RBP	4.86	□□□□□ -1.63
YDL023C	YDL023C	THI74	Q04083	370 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	MRX8	Q05473	314 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	YOR342C	Q12182	319 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	YOR214C	Q12282	236 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	CRC1	Q12289	327 aa		4.86	□□□□□ -1.63
YDL023C	YDL023C	RPB5	P20434	215 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	RSA4	P25382	515 aa	Known RBP	4.85	□□□□□ -1.63
YDL023C	YDL023C	MRPL17	P36528	281 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	CHS7	P38843	316 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	PRM5	P40476	318 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	GLR1	P41921	483 aa	Known RBP	4.85	□□□□□ -1.63
YDL023C	YDL023C	STB1	P42845	420 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	YFR054C	P43622	192 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	YGR015C	P53208	328 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	YGR039W	P53225	103 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	FMP48	P53233	369 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	SUN4	P53616	420 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	YLR179C	Q06252	201 aa	Known RBP	4.85	□□□□□ -1.63
YDL023C	YDL023C	FCY1	Q12178	158 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	YDL180W	Q12301	547 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	YPS3	Q12303	508 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	NAG1	Q8TGN9	163 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	HTL1	Q9URQ5	78 aa		4.85	□□□□□ -1.63
YDL023C	YDL023C	DDI2	P0CH63	225 aa		4.84	□□□□□ -1.63
YDL023C	YDL023C	DDI3	P0CH64	225 aa		4.84	□□□□□ -1.63
YDL023C	YDL023C	CSH1	P38287	376 aa		4.84	□□□□□ -1.63
YDL023C	YDL023C	PTI1	P39927	425 aa	Predicted RBP	4.84	□□□□□ -1.63
YDL023C	YDL023C	YER189W	P40104	122 aa		4.84	□□□□□ -1.63
YDL023C	YDL023C	SNM1	P40993	198 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms