RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 SNX27Q96L92 541 aa20.97■□□□□ 0.95
RBFOX1-215ENST00000553186 PTCH2Q9Y6C5 1203 aa20.97■□□□□ 0.95
RBFOX1-215ENST00000553186 ANO9A1A5B4 782 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 CALCAP01258 141 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 ITGB3P05106 788 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 ASPAP45381 313 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 MGAT3Q09327 533 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 PAPD7Q5XG87 772 aaKnown RBP20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 TMEM270Q6UE05 265 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 ALKAL1Q6UXT8 129 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 TAF4BQ92750 862 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 PCDHB4Q9Y5E5 795 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 PCDHGC5Q9Y5F6 944 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 SLU7O95391 586 aaKnown RBP20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 RPLP2P05387 115 aaKnown RBP20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 KRT19P08727 400 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 TMEM253P0C7T8 217 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 GZMAP12544 262 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 ZNF132P52740 706 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 BPIFB4P59827 614 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 ZMAT2Q96NC0 199 aaKnown RBP20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 ALS2CR12Q96Q35 445 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 TRIM6Q9C030 488 aaPredicted RBP20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 TSKSQ9UJT2 592 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 JRKLQ9Y4A0 524 aa20.96■□□□□ 0.95
RBFOX1-215ENST00000553186 A0A0A6YYK5 440 aaPredicted RBP20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 CLSTN1O94985 981 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 CTSHP09668 335 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 ZBTB6Q15916 424 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 KIF12Q96FN5 646 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 VRTNQ9H8Y1 702 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 CDC23Q9UJX2 597 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 DERAQ9Y315 318 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 TRIM17Q9Y577 477 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 MOXD2PA6NHM9 499 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 RECQL4O94761 1208 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 FTLP02792 175 aaPredicted RBP20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 GUCY2FP51841 1108 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 NAP1L1P55209 391 aaKnown RBP20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 RBBP8NLQ8NC74 664 aaPredicted RBP20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 LRRN4CLQ8ND94 238 aa20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 TSEN34Q9BSV6 310 aaKnown RBP20.95■□□□□ 0.94
RBFOX1-215ENST00000553186 ANKRD62A6NC57 917 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 YARSP54577 528 aaKnown RBP20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 TUBB2AQ13885 445 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 ZNF677Q86XU0 584 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 FAXDC2Q96IV6 333 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 TUBB2BQ9BVA1 445 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 THAP2Q9H0W7 228 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 RNF39Q9H2S5 420 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 CISHQ9NSE2 258 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 TRMT13Q9NUP7 481 aaKnown RBP20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 DPP3Q9NY33 737 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 CNTN3Q9P232 1028 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 ITGA11Q9UKX5 1188 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 ST3GAL5Q9UNP4 418 aa20.94■□□□□ 0.94
RBFOX1-215ENST00000553186 RTN2O75298 545 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 WEE2P0C1S8 567 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 AKAP5P24588 427 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 POLR2BP30876 1174 aaKnown RBP20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 ATICP31939 592 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 THPOP40225 353 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 PTPN11Q06124 597 aaPredicted RBP20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 WDR72Q3MJ13 1102 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 SMG8Q8ND04 991 aaKnown RBP20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 BCO2Q9BYV7 579 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 POLIQ9UNA4 740 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 NCANO14594 1321 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 FAM170AA1A519 330 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 GRID2IPA4D2P6 1211 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 RPS6KA5O75582 802 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 PALMO75781 387 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 ABCB4P21439 1286 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 XKR4Q5GH76 650 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 ZNF667Q5HYK9 610 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 SMYD5Q6GMV2 418 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 GLT1D1Q96MS3 346 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 OSBPL7Q9BZF2 842 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 NXF1Q9UBU9 619 aaKnown RBP20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 IPPQ9Y573 584 aa20.93■□□□□ 0.94
RBFOX1-215ENST00000553186 TFRCP02786 760 aaKnown RBP20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 PTK7Q13308 1070 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 TRIM71Q2Q1W2 868 aaKnown RBP20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 CTNNBL1Q8WYA6 563 aaPredicted RBP20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 ARHGEF26Q96DR7 871 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 CARD6Q9BX69 1037 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 AGO3Q9H9G7 860 aaKnown RBP20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 AGAP1Q9UPQ3 857 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 CITO14578 2027 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 UNGP13051 313 aaPredicted RBP20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 CD58P19256 250 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 GNA15P30679 374 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 RBP5P82980 135 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 TWF2Q6IBS0 349 aaKnown RBP20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 SCARA5Q6ZMJ2 495 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 LRRC57Q8N9N7 239 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 SH3TC2Q8TF17 1288 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 RFFLQ8WZ73 363 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 TSC1Q92574 1164 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 APOL6Q9BWW8 343 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms