RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 SCARA3Q6AZY7 606 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 TRIM65Q6PJ69 517 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 TMEM130Q8N3G9 435 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 C18orf25Q96B23 403 aaPredicted RBP14.37□□□□□ -0.11
PRDM2-213ENST00000503842 TTYH3Q9C0H2 523 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 GANQ9H2C0 597 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 RAB20Q9NX57 234 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 MIOSQ9NXC5 875 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 TUBGCP4Q9UGJ1 667 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 PLAGL2Q9UPG8 496 aa14.37□□□□□ -0.11
PRDM2-213ENST00000503842 EPHB6O15197 1021 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 XPOTO43592 962 aaKnown RBP14.36□□□□□ -0.11
PRDM2-213ENST00000503842 EFCAB14O75071 495 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 LRRN2O75325 713 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 BAIAP3O94812 1187 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 NOL4O94818 638 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 ACRP10323 421 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 ACTN1P12814 892 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 IBSPP21815 317 aaPredicted RBP14.36□□□□□ -0.11
PRDM2-213ENST00000503842 PIK3CAP42336 1068 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 SCNN1GP51170 649 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 APBA1Q02410 837 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 FPGSQ05932 587 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 CCDC173Q0VFZ6 552 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 NCOA4Q13772 614 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 NAB2Q15742 525 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 FIGNQ5HY92 759 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 KLHDC7AQ5VTJ3 777 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.36□□□□□ -0.114e-14■■■■■ 43.8
PRDM2-213ENST00000503842 C16orf59Q7L2K0 433 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 NPAS4Q8IUM7 802 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 BEST2Q8NFU1 509 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 RPS6KC1Q96S38 1066 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 PPP1R9BQ96SB3 815 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 NUP58Q9BVL2 599 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 SLC4A5Q9BY07 1137 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 DPP3Q9NY33 737 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 ITGA11Q9UKX5 1188 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 ZMYND8Q9ULU4 1186 aaPredicted RBP14.36□□□□□ -0.11
PRDM2-213ENST00000503842 PCDHB7Q9Y5E2 793 aa14.36□□□□□ -0.11
PRDM2-213ENST00000503842 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.36□□□□□ -0.112e-7■■■□□ 16.5
PRDM2-213ENST00000503842 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.36□□□□□ -0.11
PRDM2-213ENST00000503842 GPR37O15354 613 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 ZC3H11AO75152 810 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRDM2-213ENST00000503842 PHACTR2O75167 634 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 CST3P01034 146 aaPredicted RBP14.35□□□□□ -0.11
PRDM2-213ENST00000503842 GYPCP04921 128 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 THP07101 528 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 FGFR1P11362 822 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 SYN1P17600 705 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 LRPAP1P30533 357 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 EPHB4P54760 987 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 SOX4Q06945 474 aaPredicted RBP14.35□□□□□ -0.11
PRDM2-213ENST00000503842 GRIK3Q13003 919 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 TRIM14Q14142 442 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 GLB1LQ6UWU2 654 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 DRC7Q8IY82 874 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 SPC24Q8NBT2 197 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 NEK11Q8NG66 645 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 HELQQ8TDG4 1101 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 DPF3Q92784 378 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 IQCDQ96DY2 449 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 PCMTD1Q96MG8 357 aaPredicted RBP14.35□□□□□ -0.11
PRDM2-213ENST00000503842 EDEM3Q9BZQ6 932 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 XYLT2Q9H1B5 865 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 FAM207AQ9NSI2 230 aaPredicted RBP14.35□□□□□ -0.11
PRDM2-213ENST00000503842 SLC38A7Q9NVC3 462 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 IMPACTQ9P2X3 320 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 FBXL5Q9UKA1 691 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 LRFN2Q9ULH4 789 aa14.35□□□□□ -0.11
PRDM2-213ENST00000503842 MKI67P46013 3256 aaKnown RBP14.35□□□□□ -0.11
PRDM2-213ENST00000503842 ANO9A1A5B4 782 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 HOXA2O43364 376 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 ASS1P00966 412 aaKnown RBP14.34□□□□□ -0.11
PRDM2-213ENST00000503842 ITGB3P05106 788 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 POLR2BP30876 1174 aaKnown RBP14.34□□□□□ -0.11
PRDM2-213ENST00000503842 MYL6P60660 151 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 WDR5P61964 334 aaKnown RBP14.34□□□□□ -0.11
PRDM2-213ENST00000503842 RBP5P82980 135 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 TRPC3Q13507 836 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 NOMO2Q5JPE7 1267 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 C9orf57Q5W0N0 161 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 RSPH1Q8WYR4 309 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 NT5C1BQ96P26 610 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 PI4K2AQ9BTU6 479 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 NAA15Q9BXJ9 866 aaKnown RBP14.34□□□□□ -0.11
PRDM2-213ENST00000503842 VRTNQ9H8Y1 702 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 APOBEC3GQ9HC16 384 aaKnown RBP14.34□□□□□ -0.11
PRDM2-213ENST00000503842 APEX2Q9UBZ4 518 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 INPP5FQ9Y2H2 1132 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 DAAM1Q9Y4D1 1078 aa14.34□□□□□ -0.11
PRDM2-213ENST00000503842 SCN1AP35498 2009 aa14.33□□□□□ -0.12
PRDM2-213ENST00000503842 A0A1W2PQJ5 194 aa14.33□□□□□ -0.12
PRDM2-213ENST00000503842 RNF225M0QZC1 329 aaPredicted RBP14.33□□□□□ -0.12
PRDM2-213ENST00000503842 PIRO00625 290 aa14.33□□□□□ -0.12
PRDM2-213ENST00000503842 PPEF2O14830 753 aa14.33□□□□□ -0.12
PRDM2-213ENST00000503842 STAU1O95793 577 aaKnown RBP14.33□□□□□ -0.12
PRDM2-213ENST00000503842 POMCP01189 267 aa14.33□□□□□ -0.12
PRDM2-213ENST00000503842 AMHP03971 560 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms