RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SLC38A3Q99624 504 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 PTPN18Q99952 460 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 SLC6A15Q9H2J7 730 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 KLHL11Q9NVR0 708 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 ABCF2Q9UG63 623 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 STAP2Q9UGK3 403 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 TRPC5Q9UL62 973 aaPredicted RBP6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 E9PCH4 1651 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 GCC2Q8IWJ2 1684 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 LOC102724159A0A0B4J2E5 919 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 ARIH2O95376 493 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 JUNP05412 331 aaKnown RBP6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 TYRP14679 529 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 MALP21145 153 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 PCSK1P29120 753 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 PTPN7P35236 360 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 ADCY7P51828 1080 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 GJA9P57773 515 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 ATP8B2P98198 1209 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 HGFACQ04756 655 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 SNAPC2Q13487 334 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 MTM1Q13496 603 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 FGL2Q14314 439 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 PLS1Q14651 629 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 PWP2Q15269 919 aaKnown RBP6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 VPS72Q15906 364 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 PRAMEF14Q5SWL7 426 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 APOA5Q6Q788 366 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 RALYLQ86SE5 291 aaKnown RBP6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 MORC1Q86VD1 984 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 SH2D3CQ8N5H7 860 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 MDM1Q8TC05 714 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 STON2Q8WXE9 905 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 MTFMTQ96DP5 389 aaKnown RBP6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 FAM167AQ96KS9 214 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 ZMAT3Q9HA38 289 aaKnown RBP6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 ATP6V0A4Q9HBG4 840 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 TMEM140Q9NV12 185 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 TAGLN3Q9UI15 199 aa6.93□□□□□ -1.3
RNU4-39P-201ENST00000362455 EP400Q96L91 3159 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 WNT10BO00744 389 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 ARHGAP6O43182 974 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 MGEA5O60502 916 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 FPR1P21462 350 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 SERPINB3P29508 390 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 CASRP41180 1078 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 HTR3AP46098 478 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 AFF3P51826 1226 aaKnown RBP6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 AK2P54819 239 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 LINC00310P59036 64 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 ADAM8P78325 824 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 MORC3Q14149 939 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 POLD3Q15054 466 aaPredicted RBP6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 LONRF1Q17RB8 773 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 GAGE13Q4V321 117 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 OGFOD2Q6N063 350 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 ZNF761Q86XN6 746 aaPredicted RBP6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 SPICE1Q8N0Z3 855 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 POU5F2Q8N7G0 328 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 GJA10Q969M2 543 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 LCORQ96JN0 433 aaPredicted RBP6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 RPL10LQ96L21 214 aaKnown RBP6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 FMNL2Q96PY5 1086 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 CDC5LQ99459 802 aaKnown RBP6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 C22orf23Q9BZE7 217 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 PNPOQ9NVS9 261 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 ACTL7AQ9Y615 435 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 MYO5BQ9ULV0 1848 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 MYOM2P54296 1465 aa6.92□□□□□ -1.3
RNU4-39P-201ENST00000362455 IQGAP3Q86VI3 1631 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 NRP1O14786 923 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 EIF3JO75822 258 aaKnown RBP6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 SMARCA1P28370 1054 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 ALDH5A1P51649 535 aaPredicted RBP6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 VMACQ2NL98 169 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 ZNF572Q7Z3I7 529 aaPredicted RBP6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 SMC5Q8IY18 1101 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 KRT78Q8N1N4 520 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 TP53I13Q8NBR0 393 aaPredicted RBP6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 BHLHE22Q8NFJ8 381 aaPredicted RBP6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 CASKIN2Q8WXE0 1202 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 TNIP3Q96KP6 325 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 GPHA2Q96T91 129 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 NUP62CLQ9H1M0 184 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 RTEL1Q9NZ71 1219 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 NCDNQ9UBB6 729 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 FEZ2Q9UHY8 353 aaPredicted RBP6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 DAAM1Q9Y4D1 1078 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 PTCH1Q13635 1447 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 NEXMIFQ5QGS0 1516 aa6.91□□□□□ -1.3
RNU4-39P-201ENST00000362455 NHSL1Q5SYE7 1610 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 PHGDHO43175 533 aaKnown RBP6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 TSPAN15O95858 294 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 MYF5P13349 255 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 IL2RBP14784 551 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 CTXN1P60606 82 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 NFYCQ13952 458 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 RNF151Q2KHN1 245 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 C10orf62Q5T681 223 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms