RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MNS1Q8NEH6 495 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 DDX1Q92499 740 aaKnown RBP19.45■□□□□ 0.7
VIM-201ENST00000224237 FAXDC2Q96IV6 333 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 EIF2AQ9BY44 585 aaKnown RBP19.45■□□□□ 0.7
VIM-201ENST00000224237 XYLT2Q9H1B5 865 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 PCDHB4Q9Y5E5 795 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 GRIN2DO15399 1336 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 MYH10P35580 1976 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 CABYRO75952 493 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 KRT19P08727 400 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 YARSP54577 528 aaKnown RBP19.44■□□□□ 0.7
VIM-201ENST00000224237 TMEM270Q6UE05 265 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 RPAINQ86UA6 219 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 DNAAF5Q86Y56 855 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 ISCUQ9H1K1 167 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 TRPV2Q9Y5S1 764 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 SAR1BQ9Y6B6 198 aa19.44■□□□□ 0.7
VIM-201ENST00000224237 RTN2O75298 545 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 ITGB3P05106 788 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 ATICP31939 592 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 GRK4P32298 578 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 CARD6Q9BX69 1037 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 SNTG2Q9NY99 539 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 TAS2R14Q9NYV8 317 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 SIX4Q9UIU6 781 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 ITGA11Q9UKX5 1188 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 DERAQ9Y315 318 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 CDY2AQ9Y6F7 541 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 NCANO14594 1321 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 WHAMMP3Q1A5X7 153 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 TMEM130Q8N3G9 435 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 UBR7Q8N806 425 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 SH3TC2Q8TF17 1288 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 RFFLQ8WZ73 363 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 SNX27Q96L92 541 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 PCDHB18PQ96TA0 734 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 VRTNQ9H8Y1 702 aa19.43■□□□□ 0.7
VIM-201ENST00000224237 PALMO75781 387 aa19.42■□□□□ 0.7
VIM-201ENST00000224237 FTLP02792 175 aaPredicted RBP19.42■□□□□ 0.7
VIM-201ENST00000224237 ABCB4P21439 1286 aa19.42■□□□□ 0.7
VIM-201ENST00000224237 NOP2P46087 812 aaKnown RBP19.42■□□□□ 0.7
VIM-201ENST00000224237 YWHAEP62258 255 aaKnown RBP19.42■□□□□ 0.7
VIM-201ENST00000224237 FAM228AQ86W67 206 aa19.42■□□□□ 0.7
VIM-201ENST00000224237 CEP112Q8N8E3 955 aa19.42■□□□□ 0.7
VIM-201ENST00000224237 RBBP8NLQ8NC74 664 aaPredicted RBP19.42■□□□□ 0.7
VIM-201ENST00000224237 CXorf38Q8TB03 319 aa19.42■□□□□ 0.7
VIM-201ENST00000224237 KIF12Q96FN5 646 aa19.42■□□□□ 0.7
VIM-201ENST00000224237 GNA15P30679 374 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 ASPAP45381 313 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 ZNF132P52740 706 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 ZNF667Q5HYK9 610 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 LHX8Q68G74 356 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 NXF3Q9H4D5 531 aaKnown RBP19.41■□□□□ 0.7
VIM-201ENST00000224237 HMX1Q9NP08 348 aaPredicted RBP19.41■□□□□ 0.7
VIM-201ENST00000224237 GRID2IPA4D2P6 1211 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 MOXD2PA6NHM9 499 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 CTSHP09668 335 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 ACLYP53396 1101 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 PTGISQ16647 500 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 RHOT2Q8IXI1 618 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 SENP6Q9GZR1 1112 aaPredicted RBP19.41■□□□□ 0.7
VIM-201ENST00000224237 THAP2Q9H0W7 228 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 PDCL3Q9H2J4 239 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 CISHQ9NSE2 258 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 DPP3Q9NY33 737 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 CNTN3Q9P232 1028 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 SNX12Q9UMY4 172 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 NOC2LQ9Y3T9 749 aaKnown RBP19.41■□□□□ 0.7
VIM-201ENST00000224237 FRMPD3Q5JV73 1810 aa19.41■□□□□ 0.7
VIM-201ENST00000224237 RPS6KA5O75582 802 aa19.4■□□□□ 0.7
VIM-201ENST00000224237 RECQL4O94761 1208 aa19.4■□□□□ 0.7
VIM-201ENST00000224237 MYCP01106 439 aaPredicted RBP19.4■□□□□ 0.7
VIM-201ENST00000224237 PRLRP16471 622 aa19.4■□□□□ 0.7
VIM-201ENST00000224237 POLR2BP30876 1174 aaKnown RBP19.4■□□□□ 0.7
VIM-201ENST00000224237 RBM10P98175 930 aaKnown RBP19.4■□□□□ 0.7
VIM-201ENST00000224237 PTPN11Q06124 597 aaPredicted RBP19.4■□□□□ 0.7
VIM-201ENST00000224237 ITGA7Q13683 1181 aa19.4■□□□□ 0.7
VIM-201ENST00000224237 TPCN2Q8NHX9 752 aa19.4■□□□□ 0.7
VIM-201ENST00000224237 CALR3Q96L12 384 aaKnown RBP19.4■□□□□ 0.7
VIM-201ENST00000224237 HES2Q9Y543 173 aa19.4■□□□□ 0.7
VIM-201ENST00000224237 EFCAB8A8MWE9 144 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 STAU1O95793 577 aaKnown RBP19.39■□□□□ 0.7
VIM-201ENST00000224237 P4HA1P13674 534 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 RBP5P82980 135 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 MGAT3Q09327 533 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 CLEC16AQ2KHT3 1053 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 WDR72Q3MJ13 1102 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 UBXN11Q5T124 520 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 ALKAL1Q6UXT8 129 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 SCARA5Q6ZMJ2 495 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 TRIM72Q6ZMU5 477 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 SYCE1Q8N0S2 351 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 SLC35G2Q8TBE7 412 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 GLT1D1Q96MS3 346 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 TSEN34Q9BSV6 310 aaKnown RBP19.39■□□□□ 0.7
VIM-201ENST00000224237 BCO2Q9BYV7 579 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 NXF1Q9UBU9 619 aaKnown RBP19.39■□□□□ 0.7
VIM-201ENST00000224237 HYOU1Q9Y4L1 999 aa19.39■□□□□ 0.7
VIM-201ENST00000224237 TADA3O75528 432 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 CHRNA1P02708 482 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms