RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 ERD2P18414 219 aa1.2□□□□□ -2.22
snR78snR78 RPS5P26783 225 aaKnown RBP1.2□□□□□ -2.22
snR78snR78 MRPL37P36532 105 aa1.2□□□□□ -2.22
snR78snR78 BFR1P38934 470 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
snR78snR78 YER076CP40049 302 aa1.2□□□□□ -2.22
snR78snR78 MEP1P40260 492 aa1.2□□□□□ -2.22
snR78snR78 RSM25P40496 264 aa1.2□□□□□ -2.22
snR78snR78 RRF1P38771 230 aa1.19□□□□□ -2.22
snR78snR78 SPG3Q04398 127 aaPredicted RBP1.19□□□□□ -2.22
snR78snR78 SEI1Q06058 285 aa1.19□□□□□ -2.22
snR78snR78 GAA1P39012 614 aa1.18□□□□□ -2.22
snR78snR78 RPL37BP51402 88 aaKnown RBP1.18□□□□□ -2.22
snR78snR78 YML096WQ04489 525 aa1.18□□□□□ -2.22
snR78snR78 ANT1Q06497 328 aa1.18□□□□□ -2.22
snR78snR78 MET5P47169 1442 aa1.17□□□□□ -2.22
snR78snR78 KDX1P36005 433 aa1.17□□□□□ -2.22
snR78snR78 YRB2P40517 327 aa1.17□□□□□ -2.22
snR78snR78 YMR144WP40214 342 aaKnown RBP1.16□□□□□ -2.22
snR78snR78 AIF1P52923 378 aa1.16□□□□□ -2.22
snR78snR78 SAY1P53324 424 aa1.16□□□□□ -2.22
snR78snR78 MSB2P32334 1306 aa1.15□□□□□ -2.22
snR78snR78 BIG1P38813 335 aa1.15□□□□□ -2.23
snR78snR78 ABF2Q02486 183 aa1.15□□□□□ -2.23
snR78snR78 TRM12Q04235 462 aa1.15□□□□□ -2.23
snR78snR78 SDO1Q07953 250 aaKnown RBP1.15□□□□□ -2.23
snR78snR78 CSM4Q08955 156 aa1.15□□□□□ -2.23
snR78snR78 PSF1Q12488 208 aa1.15□□□□□ -2.23
snR78snR78 YPL229WQ99395 206 aa1.15□□□□□ -2.23
snR78snR78 BTS1Q12051 335 aa1.14□□□□□ -2.23
snR78snR78 RIO2P40160 425 aaKnown RBP1.13□□□□□ -2.23
snR78snR78 HUA1P40325 198 aa1.13□□□□□ -2.23
snR78snR78 VPS21P36017 210 aaKnown RBP1.12□□□□□ -2.23
snR78snR78 RIB1P38066 345 aa1.12□□□□□ -2.23
snR78snR78 YEL067CP39978 195 aa1.11□□□□□ -2.23
snR78snR78 MPP6P53725 186 aaPredicted RBP1.11□□□□□ -2.23
snR78snR78 YMR007WQ03675 126 aa1.11□□□□□ -2.23
snR78snR78 YLR126CQ12288 251 aa1.11□□□□□ -2.23
snR78snR78 YPR170W-BP0C5R9 85 aa1.1□□□□□ -2.23
snR78snR78 MRPS28P21771 286 aa1.1□□□□□ -2.23
snR78snR78 YET1P35723 206 aa1.1□□□□□ -2.23
snR78snR78 YKL075CP36083 450 aa1.1□□□□□ -2.23
snR78snR78 TVP38P36164 337 aa1.1□□□□□ -2.23
snR78snR78 YHR139C-AO13536 103 aa1.09□□□□□ -2.23
snR78snR78 NSP1P14907 823 aaKnown RBP1.09□□□□□ -2.23
snR78snR78 DOC1P53068 250 aa1.09□□□□□ -2.23
snR78snR78 YNR077CP53758 84 aa1.09□□□□□ -2.23
snR78snR78 YDL180WQ12301 547 aa1.09□□□□□ -2.23
snR78snR78 YNL146C-AQ3E7Z1 64 aa1.09□□□□□ -2.23
snR78snR78 MSF1P08425 469 aa1.08□□□□□ -2.24
snR78snR78 ERJ5P43613 295 aaPredicted RBP1.08□□□□□ -2.24
snR78snR78 YMD8Q03697 442 aa1.08□□□□□ -2.24
snR78snR78 TFC1P32367 649 aa1.07□□□□□ -2.24
snR78snR78 YNL010WP53981 241 aaKnown RBP1.07□□□□□ -2.24
snR78snR78 MSH5Q12175 901 aa1.06□□□□□ -2.24
snR78snR78 PDR18P53756 1333 aa1.06□□□□□ -2.24
snR78snR78 AQY2P0CD90 149 aa1.05□□□□□ -2.24
snR78snR78 NOP13P53883 403 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
snR78snR78 REP2P03872 296 aa1.04□□□□□ -2.24
snR78snR78 OM45P16547 393 aa1.04□□□□□ -2.24
snR78snR78 CUS2P53830 285 aaPredicted RBP1.04□□□□□ -2.24
snR78snR78 POP3P53833 195 aaPredicted RBP1.03□□□□□ -2.24
snR78snR78 AIM36Q03798 255 aa1.03□□□□□ -2.24
snR78snR78 TCP1P12612 559 aaKnown RBP1.02□□□□□ -2.25
snR78snR78 SRY1P36007 326 aa1.02□□□□□ -2.25
snR78snR78 UMP1P38293 148 aa1.02□□□□□ -2.25
snR78snR78 URA8P38627 578 aaPredicted RBP1.02□□□□□ -2.25
snR78snR78 IRC22P40006 225 aa1.02□□□□□ -2.25
snR78snR78 ACC1Q00955 2233 aaKnown RBP1.02□□□□□ -2.25
snR78snR78 SNZ1Q03148 297 aa1.02□□□□□ -2.25
snR78snR78 YML108WQ03759 105 aa1.02□□□□□ -2.25
snR78snR78 YOR029WQ12243 111 aa1.02□□□□□ -2.25
snR78snR78 PBN1P25580 416 aa1.01□□□□□ -2.25
snR78snR78 PEX17P40155 199 aa1.01□□□□□ -2.25
snR78snR78 SOK1P40317 901 aa1.01□□□□□ -2.25
snR78snR78 GAS3Q03655 524 aa1.01□□□□□ -2.25
snR78snR78 ATG22P25568 528 aa1□□□□□ -2.25
snR78snR78 DID2P69771 204 aa1□□□□□ -2.25
snR78snR78 LPP1Q04396 274 aa1□□□□□ -2.25
snR78snR78 TUS1Q06412 1307 aa0.99□□□□□ -2.25
snR78snR78 YBR209WP38311 105 aa0.99□□□□□ -2.25
snR78snR78 DOG2P38773 246 aa0.99□□□□□ -2.25
snR78snR78 HOC1P47124 396 aa0.99□□□□□ -2.25
snR78snR78 KNH1P50112 268 aa0.99□□□□□ -2.25
snR78snR78 YOL107WQ12239 342 aa0.99□□□□□ -2.25
snR78snR78 SLH1P53327 1967 aaKnown RBP0.99□□□□□ -2.25
snR78snR78 YLR156WP0CE96 114 aa0.98□□□□□ -2.25
snR78snR78 YLR159WP0CE97 114 aa0.98□□□□□ -2.25
snR78snR78 YLR161WP0CE98 114 aa0.98□□□□□ -2.25
snR78snR78 SRB4P32569 687 aa0.98□□□□□ -2.25
snR78snR78 SNC2P33328 115 aa0.98□□□□□ -2.25
snR78snR78 YDR248CQ03786 193 aa0.98□□□□□ -2.25
snR78snR78 LSO2Q3E772 92 aaKnown RBP0.97□□□□□ -2.25
snR78snR78 MRPL28P36527 147 aa0.96□□□□□ -2.26
snR78snR78 MRPL17P36528 281 aa0.96□□□□□ -2.26
snR78snR78 MCM22P47167 239 aa0.96□□□□□ -2.26
snR78snR78 YJR149WP47177 404 aa0.96□□□□□ -2.26
snR78snR78 POP4P38336 279 aa0.95□□□□□ -2.26
snR78snR78 EAF6P47128 113 aa0.95□□□□□ -2.26
snR78snR78 SWP1Q02795 286 aa0.95□□□□□ -2.26
snR78snR78 RTT105P40063 208 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms