RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 PBN1P25580 416 aa0.52□□□□□ -2.33
snR41snR41 RPS5P26783 225 aaKnown RBP0.52□□□□□ -2.33
snR41snR41 GLG2P47011 380 aa0.52□□□□□ -2.33
snR41snR41 DOC1P53068 250 aa0.52□□□□□ -2.33
snR41snR41 MPP6P53725 186 aaPredicted RBP0.52□□□□□ -2.33
snR41snR41 MSH5Q12175 901 aa0.52□□□□□ -2.33
snR41snR41 PSF1Q12488 208 aa0.52□□□□□ -2.33
snR41snR41 YNL146C-AQ3E7Z1 64 aa0.52□□□□□ -2.33
snR41snR41 YPL229WQ99395 206 aa0.52□□□□□ -2.33
snR41snR41 TVP38P36164 337 aa0.51□□□□□ -2.33
snR41snR41 YBR063CP38083 404 aa0.51□□□□□ -2.33
snR41snR41 POP3P53833 195 aaPredicted RBP0.51□□□□□ -2.33
snR41snR41 TRM12Q04235 462 aa0.51□□□□□ -2.33
snR41snR41 SPG3Q04398 127 aaPredicted RBP0.51□□□□□ -2.33
snR41snR41 PET100P38958 111 aa0.5□□□□□ -2.33
snR41snR41 SAY1P53324 424 aa0.5□□□□□ -2.33
snR41snR41 YDL180WQ12301 547 aa0.5□□□□□ -2.33
snR41snR41 MRP1P10662 321 aaKnown RBP0.49□□□□□ -2.33
snR41snR41 DAL82P21705 255 aa0.49□□□□□ -2.33
snR41snR41 TFC1P32367 649 aa0.49□□□□□ -2.33
snR41snR41 MEP1P40260 492 aa0.49□□□□□ -2.33
snR41snR41 CAT5P41735 233 aa0.49□□□□□ -2.33
snR41snR41 USE1P53146 245 aa0.49□□□□□ -2.33
snR41snR41 YNL010WP53981 241 aaKnown RBP0.49□□□□□ -2.33
snR41snR41 ADH6Q04894 360 aaKnown RBP0.49□□□□□ -2.33
snR41snR41 SEI1Q06058 285 aa0.49□□□□□ -2.33
snR41snR41 DAL80P26343 269 aa0.48□□□□□ -2.33
snR41snR41 YKL075CP36083 450 aa0.48□□□□□ -2.33
snR41snR41 YHR127WP38833 243 aaKnown RBP0.48□□□□□ -2.33
snR41snR41 ILM1P47155 203 aa0.48□□□□□ -2.33
snR41snR41 AIF1P52923 378 aa0.48□□□□□ -2.33
snR41snR41 NOP13P53883 403 aaKnown RBP RIP-Chip data0.48□□□□□ -2.33not detected
snR41snR41 ABF2Q02486 183 aa0.48□□□□□ -2.33
snR41snR41 CSM4Q08955 156 aa0.48□□□□□ -2.33
snR41snR41 PDR18P53756 1333 aa0.47□□□□□ -2.33
snR41snR41 YHR139C-AO13536 103 aa0.47□□□□□ -2.33
snR41snR41 RPL24AP04449 155 aaKnown RBP0.47□□□□□ -2.33
snR41snR41 RNA15P25299 296 aaPredicted RBP0.47□□□□□ -2.33
snR41snR41 BFR1P38934 470 aaKnown RBP RIP-Chip data0.47□□□□□ -2.33not detected
snR41snR41 SOK1P40317 901 aa0.47□□□□□ -2.33
snR41snR41 ERJ5P43613 295 aaPredicted RBP0.47□□□□□ -2.33
snR41snR41 DID2P69771 204 aa0.47□□□□□ -2.33
snR41snR41 COX20Q04935 205 aa0.47□□□□□ -2.33
snR41snR41 SSQ1Q05931 657 aaPredicted RBP0.47□□□□□ -2.33
snR41snR41 MET5P47169 1442 aa0.47□□□□□ -2.33
snR41snR41 REP2P03872 296 aa0.46□□□□□ -2.34
snR41snR41 POL30P15873 258 aaKnown RBP0.46□□□□□ -2.34
snR41snR41 YET1P35723 206 aa0.46□□□□□ -2.34
snR41snR41 YFL065CP43539 102 aa0.46□□□□□ -2.34
snR41snR41 YAE1P47118 141 aaPredicted RBP0.46□□□□□ -2.34
snR41snR41 ERV25P54837 211 aaKnown RBP0.46□□□□□ -2.34
snR41snR41 RHO3Q00245 231 aaKnown RBP0.46□□□□□ -2.34
snR41snR41 YDR209CQ03480 137 aa0.46□□□□□ -2.34
snR41snR41 YML096WQ04489 525 aa0.46□□□□□ -2.34
snR41snR41 ACC1Q00955 2233 aaKnown RBP0.46□□□□□ -2.34
snR41snR41 SRY1P36007 326 aa0.45□□□□□ -2.34
snR41snR41 YNR077CP53758 84 aa0.45□□□□□ -2.34
snR41snR41 SNU23Q12368 194 aaPredicted RBP0.45□□□□□ -2.34
snR41snR41 MRPS28P21771 286 aa0.44□□□□□ -2.34
snR41snR41 UMP1P38293 148 aa0.44□□□□□ -2.34
snR41snR41 YBR209WP38311 105 aa0.44□□□□□ -2.34
snR41snR41 FLX1P40464 311 aa0.44□□□□□ -2.34
snR41snR41 KNH1P50112 268 aa0.44□□□□□ -2.34
snR41snR41 RIB1P38066 345 aa0.43□□□□□ -2.34
snR41snR41 YHL042WP38729 150 aa0.43□□□□□ -2.34
snR41snR41 EDC3P39998 551 aaKnown RBP0.43□□□□□ -2.34
snR41snR41 IRC22P40006 225 aa0.43□□□□□ -2.34
snR41snR41 SDO1Q07953 250 aaKnown RBP0.43□□□□□ -2.34
snR41snR41 EMC2P47133 292 aaKnown RBP0.42□□□□□ -2.34
snR41snR41 GAS3Q03655 524 aa0.42□□□□□ -2.34
snR41snR41 LCL2Q08045 131 aa0.42□□□□□ -2.34
snR41snR41 FSF1Q12029 327 aaKnown RBP0.42□□□□□ -2.34
snR41snR41 BTS1Q12051 335 aa0.42□□□□□ -2.34
snR41snR41 SIP3P38717 1229 aa0.41□□□□□ -2.34
snR41snR41 YMR144WP40214 342 aaKnown RBP0.41□□□□□ -2.34
snR41snR41 MSF1P08425 469 aa0.4□□□□□ -2.35
snR41snR41 YHR212W-AP0CX91 67 aa0.4□□□□□ -2.35
snR41snR41 URA8P38627 578 aaPredicted RBP0.4□□□□□ -2.35
snR41snR41 PEX17P40155 199 aa0.4□□□□□ -2.35
snR41snR41 RCE1Q03530 315 aa0.4□□□□□ -2.35
snR41snR41 YML108WQ03759 105 aa0.4□□□□□ -2.35
snR41snR41 YPR170W-BP0C5R9 85 aa0.39□□□□□ -2.35
snR41snR41 SNC2P33328 115 aa0.39□□□□□ -2.35
snR41snR41 OPY1P38271 328 aa0.39□□□□□ -2.35
snR41snR41 ARO8P53090 500 aaKnown RBP0.39□□□□□ -2.35
snR41snR41 CWC27Q02770 301 aa0.39□□□□□ -2.35
snR41snR41 SWP1Q02795 286 aa0.39□□□□□ -2.35
snR41snR41 ATG40Q99325 256 aa0.39□□□□□ -2.35
snR41snR41 SHE2P36068 246 aaKnown RBP RIP-Chip data0.38□□□□□ -2.35not detected
snR41snR41 MRPL17P36528 281 aa0.38□□□□□ -2.35
snR41snR41 YJR149WP47177 404 aa0.38□□□□□ -2.35
snR41snR41 YMD8Q03697 442 aa0.38□□□□□ -2.35
snR41snR41 YLR156WP0CE96 114 aa0.37□□□□□ -2.35
snR41snR41 YLR159WP0CE97 114 aa0.37□□□□□ -2.35
snR41snR41 YLR161WP0CE98 114 aa0.37□□□□□ -2.35
snR41snR41 SRB4P32569 687 aa0.37□□□□□ -2.35
snR41snR41 YNL247WP53852 767 aaKnown RBP0.37□□□□□ -2.35
snR41snR41 YDR248CQ03786 193 aa0.37□□□□□ -2.35
snR41snR41 LPP1Q04396 274 aa0.37□□□□□ -2.35
snR41snR41 GPM2Q12008 311 aa0.37□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms