RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 VPS21P36017 210 aaKnown RBP-1.83□□□□□ -2.7
snR38snR38 MNN9P39107 395 aaKnown RBP-1.83□□□□□ -2.7
snR38snR38 FSF1Q12029 327 aaKnown RBP-1.83□□□□□ -2.7
snR38snR38 YOR034C-AQ3E735 80 aa-1.83□□□□□ -2.7
snR38snR38 SWI1P09547 1314 aa-1.84□□□□□ -2.7
snR38snR38 SWD2P36104 329 aaPredicted RBP-1.84□□□□□ -2.7
snR38snR38 GOT1Q03554 138 aa-1.84□□□□□ -2.7
snR38snR38 ASR1Q06834 288 aa-1.84□□□□□ -2.7
snR38snR38 TFB5Q3E7C1 72 aaPredicted RBP-1.84□□□□□ -2.7
snR38snR38 HIS2P38635 335 aa-1.85□□□□□ -2.71
snR38snR38 YPL073CP40323 161 aa-1.85□□□□□ -2.71
snR38snR38 SER33P40510 469 aa-1.85□□□□□ -2.71
snR38snR38 RPA34P47006 233 aaPredicted RBP-1.85□□□□□ -2.71
snR38snR38 LOH1P47055 219 aa-1.85□□□□□ -2.71
snR38snR38 YML6P51998 286 aa-1.85□□□□□ -2.71
snR38snR38 LSB1P53281 241 aa-1.85□□□□□ -2.71
snR38snR38 GRE1Q08969 168 aa-1.85□□□□□ -2.71
snR38snR38 YOR020W-AQ3E824 90 aa-1.85□□□□□ -2.71
snR38snR38 POL2P21951 2222 aaKnown RBP-1.86□□□□□ -2.71
snR38snR38 RPS22AP0C0W1 130 aaKnown RBP-1.86□□□□□ -2.71
snR38snR38 ADH5P38113 351 aaKnown RBP-1.86□□□□□ -2.71
snR38snR38 ECM33P38248 429 aaKnown RBP-1.86□□□□□ -2.71
snR38snR38 TVP23P38962 199 aa-1.86□□□□□ -2.71
snR38snR38 YER034WP40022 185 aaKnown RBP-1.86□□□□□ -2.71
snR38snR38 EAF6P47128 113 aa-1.86□□□□□ -2.71
snR38snR38 MGR2Q02889 113 aa-1.86□□□□□ -2.71
snR38snR38 VPS71Q03433 280 aa-1.86□□□□□ -2.71
snR38snR38 RPS22BQ3E7Y3 130 aaKnown RBP-1.86□□□□□ -2.71
snR38snR38 HTL1Q9URQ5 78 aa-1.86□□□□□ -2.71
snR38snR38 ROM2P51862 1356 aaKnown RBP-1.86□□□□□ -2.71
snR38snR38 SEN2P16658 377 aa-1.87□□□□□ -2.71
snR38snR38 FCY2P17064 533 aa-1.87□□□□□ -2.71
snR38snR38 MAK5P38112 773 aaPredicted RBP-1.87□□□□□ -2.71
snR38snR38 RPF1P38805 295 aaKnown RBP-1.87□□□□□ -2.71
snR38snR38 COX16P47081 118 aa-1.87□□□□□ -2.71
snR38snR38 GTO1P48239 356 aa-1.87□□□□□ -2.71
snR38snR38 SXM1Q04175 944 aaKnown RBP-1.87□□□□□ -2.71
snR38snR38 YPR172WQ06608 200 aa-1.87□□□□□ -2.71
snR38snR38 SYC1Q08553 188 aaPredicted RBP-1.87□□□□□ -2.71
snR38snR38 GPM2Q12008 311 aa-1.87□□□□□ -2.71
snR38snR38 POM33Q12164 279 aa-1.87□□□□□ -2.71
snR38snR38 RPL18AP0CX49 186 aaKnown RBP-1.88□□□□□ -2.71
snR38snR38 RPL18BP0CX50 186 aaKnown RBP-1.88□□□□□ -2.71
snR38snR38 POT1P27796 417 aaKnown RBP RIP-Chip data-1.88□□□□□ -2.71not detected
snR38snR38 YKL162CP36052 402 aa-1.88□□□□□ -2.71
snR38snR38 YKR070WP36151 352 aaKnown RBP-1.88□□□□□ -2.71
snR38snR38 VMA22P38784 181 aa-1.88□□□□□ -2.71
snR38snR38 NBP35P52920 328 aa-1.88□□□□□ -2.71
snR38snR38 YDR248CQ03786 193 aa-1.88□□□□□ -2.71
snR38snR38 JLP1Q12358 412 aa-1.88□□□□□ -2.71
snR38snR38 IPP1P00817 287 aaKnown RBP-1.89□□□□□ -2.71
snR38snR38 KIN28P06242 306 aa-1.89□□□□□ -2.71
snR38snR38 YBR063CP38083 404 aa-1.89□□□□□ -2.71
snR38snR38 ERG28P40030 148 aa-1.89□□□□□ -2.71
snR38snR38 HAM1P47119 197 aaKnown RBP-1.89□□□□□ -2.71
snR38snR38 YGL034CP53186 121 aa-1.89□□□□□ -2.71
snR38snR38 ABZ2Q03266 374 aa-1.89□□□□□ -2.71
snR38snR38 YMR321CQ04898 105 aa-1.89□□□□□ -2.71
snR38snR38 SSQ1Q05931 657 aaPredicted RBP-1.89□□□□□ -2.71
snR38snR38 SFH1Q06168 426 aa-1.89□□□□□ -2.71
snR38snR38 GPN3Q06543 272 aa-1.89□□□□□ -2.71
snR38snR38 PSF1Q12488 208 aa-1.89□□□□□ -2.71
snR38snR38 FRS2P15625 503 aaKnown RBP-1.9□□□□□ -2.71
snR38snR38 PET18P25362 215 aa-1.9□□□□□ -2.71
snR38snR38 RPL5P26321 297 aaKnown RBP-1.9□□□□□ -2.71
snR38snR38 UBC6P33296 250 aaPredicted RBP-1.9□□□□□ -2.71
snR38snR38 MRPL40P36534 297 aa-1.9□□□□□ -2.71
snR38snR38 YHR140WP38842 239 aa-1.9□□□□□ -2.71
snR38snR38 MRH4P53166 561 aa-1.9□□□□□ -2.71
snR38snR38 YLR156WP0CE96 114 aa-1.91□□□□□ -2.72
snR38snR38 YLR159WP0CE97 114 aa-1.91□□□□□ -2.72
snR38snR38 YLR161WP0CE98 114 aa-1.91□□□□□ -2.72
snR38snR38 MGM101P32787 269 aaKnown RBP-1.91□□□□□ -2.72
snR38snR38 YBR285WP38354 144 aa-1.91□□□□□ -2.72
snR38snR38 RPA43P46669 326 aa-1.91□□□□□ -2.72
snR38snR38 SBH2P52871 88 aa-1.91□□□□□ -2.72
snR38snR38 SWS2P53937 143 aa-1.91□□□□□ -2.72
snR38snR38 DAD4P69851 72 aa-1.91□□□□□ -2.72
snR38snR38 ERP4Q12450 207 aa-1.91□□□□□ -2.72
snR38snR38 TSC3Q3E790 80 aa-1.91□□□□□ -2.72
snR38snR38 TAR1Q8TGM6 124 aa-1.91□□□□□ -2.72
snR38snR38 STH1P32597 1359 aa-1.92□□□□□ -2.72
snR38snR38 PHO85P17157 305 aa-1.92□□□□□ -2.72
snR38snR38 YKL070WP36087 169 aa-1.92□□□□□ -2.72
snR38snR38 RIB1P38066 345 aa-1.92□□□□□ -2.72
snR38snR38 RFC2P40348 353 aa-1.92□□□□□ -2.72
snR38snR38 ALB1P47019 175 aaPredicted RBP-1.92□□□□□ -2.72
snR38snR38 UBC12P52491 188 aa-1.92□□□□□ -2.72
snR38snR38 ARV1Q06541 321 aa-1.92□□□□□ -2.72
snR38snR38 SIA1Q12212 622 aa-1.92□□□□□ -2.72
snR38snR38 NBL1Q3E7Y6 73 aa-1.92□□□□□ -2.72
snR38snR38 RNR2P09938 399 aaKnown RBP-1.93□□□□□ -2.72
snR38snR38 DBP3P20447 523 aaKnown RBP-1.93□□□□□ -2.72
snR38snR38 PPA2P28239 310 aa-1.93□□□□□ -2.72
snR38snR38 SMI1P32566 505 aa-1.93□□□□□ -2.72
snR38snR38 GVP36P40531 326 aaKnown RBP-1.93□□□□□ -2.72
snR38snR38 CIN5P40917 295 aa-1.93□□□□□ -2.72
snR38snR38 CPD1P53314 239 aa-1.93□□□□□ -2.72
snR38snR38 ABF2Q02486 183 aa-1.93□□□□□ -2.72
snR38snR38 UTP20P35194 2493 aaKnown RBP-1.94□□□□□ -2.72
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms