RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YER189WP40104 122 aa2.13□□□□□ -2.07
RPC40YPR110C RPC17P47076 161 aa2.13□□□□□ -2.07
RPC40YPR110C YJR141WP47172 347 aaPredicted RBP2.13□□□□□ -2.07
RPC40YPR110C MDM34P53083 459 aa2.13□□□□□ -2.07
RPC40YPR110C SNZ2P53824 298 aa2.13□□□□□ -2.07
RPC40YPR110C MYO5Q04439 1219 aaKnown RBP2.13□□□□□ -2.07
RPC40YPR110C SPO77Q06134 477 aa2.13□□□□□ -2.07
RPC40YPR110C HRT1Q08273 121 aa2.13□□□□□ -2.07
RPC40YPR110C YOR186WQ08560 144 aa2.13□□□□□ -2.07
RPC40YPR110C YOR268CQ08734 132 aa2.13□□□□□ -2.07
RPC40YPR110C FLO1P32768 1537 aa2.12□□□□□ -2.07
RPC40YPR110C YPR096CO13587 100 aa2.12□□□□□ -2.07
RPC40YPR110C MATALPHA1P0CY06 175 aa2.12□□□□□ -2.07
RPC40YPR110C HMLALPHA1P0CY07 175 aa2.12□□□□□ -2.07
RPC40YPR110C DPM1P14020 267 aaKnown RBP2.12□□□□□ -2.07
RPC40YPR110C YCR102CP25608 368 aa2.12□□□□□ -2.07
RPC40YPR110C SGE1P33335 543 aa2.12□□□□□ -2.07
RPC40YPR110C MRPL39P36533 70 aa2.12□□□□□ -2.07
RPC40YPR110C YHR127WP38833 243 aaKnown RBP2.12□□□□□ -2.07
RPC40YPR110C NOP13P53883 403 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
RPC40YPR110C YNL046WP53956 172 aa2.12□□□□□ -2.07
RPC40YPR110C GOT1Q03554 138 aa2.12□□□□□ -2.07
RPC40YPR110C SEI1Q06058 285 aa2.12□□□□□ -2.07
RPC40YPR110C RRP40Q08285 240 aaKnown RBP2.12□□□□□ -2.07
RPC40YPR110C PST1Q12355 444 aa2.12□□□□□ -2.07
RPC40YPR110C GEP5Q12393 293 aa2.12□□□□□ -2.07
RPC40YPR110C RAD10P06838 210 aa2.11□□□□□ -2.07
RPC40YPR110C SGA1P08019 549 aa2.11□□□□□ -2.07
RPC40YPR110C VPS21P36017 210 aaKnown RBP2.11□□□□□ -2.07
RPC40YPR110C MAL32P38158 584 aa2.11□□□□□ -2.07
RPC40YPR110C TIF34P40217 347 aaKnown RBP2.11□□□□□ -2.07
RPC40YPR110C OTU1P43558 301 aa2.11□□□□□ -2.07
RPC40YPR110C PIR5P46999 287 aa2.11□□□□□ -2.07
RPC40YPR110C MAL12P53341 584 aa2.11□□□□□ -2.07
RPC40YPR110C RHO3Q00245 231 aaKnown RBP2.11□□□□□ -2.07
RPC40YPR110C RSM10Q03201 203 aa2.11□□□□□ -2.07
RPC40YPR110C YMR114CQ04471 368 aaKnown RBP2.11□□□□□ -2.07
RPC40YPR110C INM2Q05533 292 aa2.11□□□□□ -2.07
RPC40YPR110C SLD7Q08457 257 aa2.11□□□□□ -2.07
RPC40YPR110C YPR011CQ12251 326 aa2.11□□□□□ -2.07
RPC40YPR110C YLR462WO13556 202 aa2.1□□□□□ -2.07
RPC40YPR110C ERD2P18414 219 aa2.1□□□□□ -2.07
RPC40YPR110C YKR032WP36127 104 aa2.1□□□□□ -2.07
RPC40YPR110C SSH1P38353 490 aaKnown RBP2.1□□□□□ -2.07
RPC40YPR110C YEL075CP39972 122 aa2.1□□□□□ -2.07
RPC40YPR110C COG3P40094 801 aa2.1□□□□□ -2.07
RPC40YPR110C YFH7P43591 353 aa2.1□□□□□ -2.07
RPC40YPR110C SYF2P53277 215 aaPredicted RBP2.1□□□□□ -2.07
RPC40YPR110C CLP1Q08685 445 aaPredicted RBP2.1□□□□□ -2.07
RPC40YPR110C RPL26AP05743 127 aaKnown RBP2.09□□□□□ -2.07
RPC40YPR110C SPT3P06844 337 aa2.09□□□□□ -2.07
RPC40YPR110C SNA3P14359 133 aa2.09□□□□□ -2.07
RPC40YPR110C RPL24BP24000 155 aaKnown RBP2.09□□□□□ -2.07
RPC40YPR110C CUE1P38428 203 aa2.09□□□□□ -2.07
RPC40YPR110C COS8P38723 381 aa2.09□□□□□ -2.07
RPC40YPR110C PRE6P40303 254 aaKnown RBP2.09□□□□□ -2.07
RPC40YPR110C OST2P46964 130 aa2.09□□□□□ -2.07
RPC40YPR110C GON7P46984 123 aa2.09□□□□□ -2.07
RPC40YPR110C YJL016WP47072 561 aa2.09□□□□□ -2.07
RPC40YPR110C RPL26BP53221 127 aaKnown RBP2.09□□□□□ -2.07
RPC40YPR110C CWC21Q03375 135 aaKnown RBP2.09□□□□□ -2.07
RPC40YPR110C FAR8Q05040 523 aa2.09□□□□□ -2.07
RPC40YPR110C MYO1P08964 1928 aa2.09□□□□□ -2.08
RPC40YPR110C COQ1P18900 473 aa2.08□□□□□ -2.08
RPC40YPR110C SEC22P22214 214 aa2.08□□□□□ -2.08
RPC40YPR110C VMA6P32366 345 aaKnown RBP2.08□□□□□ -2.08
RPC40YPR110C NTF2P33331 125 aaKnown RBP2.08□□□□□ -2.08
RPC40YPR110C BMH2P34730 273 aaKnown RBP2.08□□□□□ -2.08
RPC40YPR110C OPY1P38271 328 aa2.08□□□□□ -2.08
RPC40YPR110C MSS2P40990 351 aa2.08□□□□□ -2.08
RPC40YPR110C MCM22P47167 239 aa2.08□□□□□ -2.08
RPC40YPR110C YJR149WP47177 404 aa2.08□□□□□ -2.08
RPC40YPR110C CAB4P53332 305 aa2.08□□□□□ -2.08
RPC40YPR110C DIA1P54005 336 aa2.08□□□□□ -2.08
RPC40YPR110C PEX12Q04370 399 aa2.08□□□□□ -2.08
RPC40YPR110C YPR172WQ06608 200 aa2.08□□□□□ -2.08
RPC40YPR110C YLR126CQ12288 251 aa2.08□□□□□ -2.08
RPC40YPR110C YPL229WQ99395 206 aa2.08□□□□□ -2.08
RPC40YPR110C FKS1P38631 1876 aaKnown RBP2.07□□□□□ -2.08
RPC40YPR110C QCR6P00127 147 aa2.07□□□□□ -2.08
RPC40YPR110C ARG80P07249 177 aa2.07□□□□□ -2.08
RPC40YPR110C BCY1P07278 416 aaKnown RBP2.07□□□□□ -2.08
RPC40YPR110C CCA1P21269 546 aa2.07□□□□□ -2.08
RPC40YPR110C RCN1P36054 211 aa2.07□□□□□ -2.08
RPC40YPR110C URA8P38627 578 aaPredicted RBP2.07□□□□□ -2.08
RPC40YPR110C TCD1P38756 429 aa2.07□□□□□ -2.08
RPC40YPR110C MIC26P50087 233 aa2.07□□□□□ -2.08
RPC40YPR110C DCR2Q05924 578 aa2.07□□□□□ -2.08
RPC40YPR110C SEY1Q99287 776 aa2.07□□□□□ -2.08
RPC40YPR110C THP2O13539 261 aaKnown RBP2.06□□□□□ -2.08
RPC40YPR110C RHO1P06780 209 aaKnown RBP2.06□□□□□ -2.08
RPC40YPR110C CDC10P25342 322 aaKnown RBP2.06□□□□□ -2.08
RPC40YPR110C PBN1P25580 416 aa2.06□□□□□ -2.08
RPC40YPR110C PPA2P28239 310 aa2.06□□□□□ -2.08
RPC40YPR110C NTG1P31378 399 aa2.06□□□□□ -2.08
RPC40YPR110C DOA4P32571 926 aa2.06□□□□□ -2.08
RPC40YPR110C UTR5P32630 166 aa2.06□□□□□ -2.08
RPC40YPR110C CLB6P32943 380 aa2.06□□□□□ -2.08
RPC40YPR110C YKT6P36015 200 aaKnown RBP2.06□□□□□ -2.08
RPC40YPR110C COX15P40086 486 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms