RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W GCN3P14741 305 aa1.86□□□□□ -2.11
UBP16YPL072W ATP7P30902 174 aa1.86□□□□□ -2.11
UBP16YPL072W SPS18P32572 300 aa1.86□□□□□ -2.11
UBP16YPL072W ARC19P33204 171 aaKnown RBP1.86□□□□□ -2.11
UBP16YPL072W APS1P35181 156 aa1.86□□□□□ -2.11
UBP16YPL072W RCN1P36054 211 aa1.86□□□□□ -2.11
UBP16YPL072W ECM14P38836 430 aa1.86□□□□□ -2.11
UBP16YPL072W YAR068WP39564 161 aa1.86□□□□□ -2.11
UBP16YPL072W SEC72P39742 193 aaKnown RBP1.86□□□□□ -2.11
UBP16YPL072W PEX17P40155 199 aa1.86□□□□□ -2.11
UBP16YPL072W FIS1P40515 155 aa1.86□□□□□ -2.11
UBP16YPL072W OST3P48439 350 aa1.86□□□□□ -2.11
UBP16YPL072W MDM34P53083 459 aa1.86□□□□□ -2.11
UBP16YPL072W PRM8P53174 237 aa1.86□□□□□ -2.11
UBP16YPL072W ERV29P53337 310 aa1.86□□□□□ -2.11
UBP16YPL072W SNZ1Q03148 297 aa1.86□□□□□ -2.11
UBP16YPL072W HRT1Q08273 121 aa1.86□□□□□ -2.11
UBP16YPL072W CLP1Q08685 445 aaPredicted RBP1.86□□□□□ -2.11
UBP16YPL072W EMP46Q12396 444 aa1.86□□□□□ -2.11
UBP16YPL072W DSF1P0CX08 502 aa1.85□□□□□ -2.11
UBP16YPL072W YNR073CP0CX09 502 aa1.85□□□□□ -2.11
UBP16YPL072W CAF4P36130 643 aa1.85□□□□□ -2.11
UBP16YPL072W MSA2P36157 363 aa1.85□□□□□ -2.11
UBP16YPL072W FAR7P43592 221 aa1.85□□□□□ -2.11
UBP16YPL072W TOS8P53147 276 aa1.85□□□□□ -2.11
UBP16YPL072W MMS2P53152 137 aa1.85□□□□□ -2.11
UBP16YPL072W CDD1Q06549 142 aa1.85□□□□□ -2.11
UBP16YPL072W YLR030WQ07967 263 aa1.85□□□□□ -2.11
UBP16YPL072W MSA1Q08471 629 aa1.85□□□□□ -2.11
UBP16YPL072W YPR096CO13587 100 aa1.84□□□□□ -2.11
UBP16YPL072W RAD10P06838 210 aa1.84□□□□□ -2.11
UBP16YPL072W FCY2P17064 533 aa1.84□□□□□ -2.11
UBP16YPL072W TOM40P23644 387 aaKnown RBP1.84□□□□□ -2.11
UBP16YPL072W OAC1P32332 324 aa1.84□□□□□ -2.11
UBP16YPL072W SRY1P36007 326 aa1.84□□□□□ -2.11
UBP16YPL072W GRE3P38715 327 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
UBP16YPL072W DOG2P38773 246 aa1.84□□□□□ -2.11
UBP16YPL072W DOG1P38774 246 aa1.84□□□□□ -2.11
UBP16YPL072W EGD2P38879 174 aaKnown RBP1.84□□□□□ -2.11
UBP16YPL072W RMD6P39975 231 aa1.84□□□□□ -2.11
UBP16YPL072W YER034WP40022 185 aaKnown RBP1.84□□□□□ -2.11
UBP16YPL072W OST2P46964 130 aa1.84□□□□□ -2.11
UBP16YPL072W YJL144WP47009 104 aa1.84□□□□□ -2.11
UBP16YPL072W YJR056CP47115 236 aa1.84□□□□□ -2.11
UBP16YPL072W GTR2P53290 341 aa1.84□□□□□ -2.11
UBP16YPL072W GRH1Q04410 372 aaKnown RBP1.84□□□□□ -2.11
UBP16YPL072W YET3Q07451 203 aa1.84□□□□□ -2.11
UBP16YPL072W REV3P14284 1504 aa1.84□□□□□ -2.12
UBP16YPL072W BUD4P47136 1447 aa1.83□□□□□ -2.12
UBP16YPL072W RPL25P04456 142 aaKnown RBP1.83□□□□□ -2.12
UBP16YPL072W HIS3P06633 220 aa1.83□□□□□ -2.12
UBP16YPL072W MET2P08465 486 aa1.83□□□□□ -2.12
UBP16YPL072W APA2P22108 325 aa1.83□□□□□ -2.12
UBP16YPL072W ARC15P40518 154 aaRIP-Chip data1.83□□□□□ -2.12not detected
UBP16YPL072W YJR141WP47172 347 aaPredicted RBP1.83□□□□□ -2.12
UBP16YPL072W YMR279CQ03263 540 aa1.83□□□□□ -2.12
UBP16YPL072W YCL012CQ8J0M4 134 aa1.83□□□□□ -2.12
UBP16YPL072W YPR170W-BP0C5R9 85 aa1.82□□□□□ -2.12
UBP16YPL072W RPS23AP0CX29 145 aaKnown RBP1.82□□□□□ -2.12
UBP16YPL072W RPS23BP0CX30 145 aa1.82□□□□□ -2.12
UBP16YPL072W ATG22P25568 528 aa1.82□□□□□ -2.12
UBP16YPL072W ADE1P27616 306 aa1.82□□□□□ -2.12
UBP16YPL072W VPS51P36116 164 aa1.82□□□□□ -2.12
UBP16YPL072W YKR032WP36127 104 aa1.82□□□□□ -2.12
UBP16YPL072W SKG1P36169 355 aa1.82□□□□□ -2.12
UBP16YPL072W MRPL28P36527 147 aa1.82□□□□□ -2.12
UBP16YPL072W YBR063CP38083 404 aa1.82□□□□□ -2.12
UBP16YPL072W RPF1P38805 295 aaKnown RBP1.82□□□□□ -2.12
UBP16YPL072W AST2P39945 430 aaKnown RBP1.82□□□□□ -2.12
UBP16YPL072W GON7P46984 123 aa1.82□□□□□ -2.12
UBP16YPL072W FCF1Q05498 189 aaPredicted RBP1.82□□□□□ -2.12
UBP16YPL072W ATG39Q06159 398 aa1.82□□□□□ -2.12
UBP16YPL072W NIP7Q08962 181 aaKnown RBP1.82□□□□□ -2.12
UBP16YPL072W CMC2Q3E7A4 109 aa1.82□□□□□ -2.12
UBP16YPL072W SAS5Q99314 248 aa1.82□□□□□ -2.12
UBP16YPL072W STU1P38198 1513 aa1.82□□□□□ -2.12
UBP16YPL072W SGA1P08019 549 aa1.81□□□□□ -2.12
UBP16YPL072W FBA1P14540 359 aaKnown RBP1.81□□□□□ -2.12
UBP16YPL072W VMA11P32842 164 aa1.81□□□□□ -2.12
UBP16YPL072W SHG1P38337 142 aa1.81□□□□□ -2.12
UBP16YPL072W YER188WP40103 239 aa1.81□□□□□ -2.12
UBP16YPL072W YGR026WP53217 278 aa1.81□□□□□ -2.12
UBP16YPL072W SYF2P53277 215 aaPredicted RBP1.81□□□□□ -2.12
UBP16YPL072W RTC4P53850 401 aa1.81□□□□□ -2.12
UBP16YPL072W DID2P69771 204 aa1.81□□□□□ -2.12
UBP16YPL072W NOT5Q12514 560 aaPredicted RBP1.81□□□□□ -2.12
UBP16YPL072W KOG1P38873 1557 aa1.81□□□□□ -2.12
UBP16YPL072W MMS22Q06164 1454 aa1.81□□□□□ -2.12
UBP16YPL072W SNF6P18888 332 aa1.81□□□□□ -2.12
UBP16YPL072W PTM1P32857 523 aa1.81□□□□□ -2.12
UBP16YPL072W ECM33P38248 429 aaKnown RBP1.81□□□□□ -2.12
UBP16YPL072W YHR125WP38831 101 aa1.81□□□□□ -2.12
UBP16YPL072W RSM25P40496 264 aa1.81□□□□□ -2.12
UBP16YPL072W LSM7P53905 115 aaKnown RBP1.81□□□□□ -2.12
UBP16YPL072W SMD2Q06217 110 aaKnown RBP1.81□□□□□ -2.12
UBP16YPL072W YLR036CQ07986 203 aa1.81□□□□□ -2.12
UBP16YPL072W YNG1Q08465 219 aa1.81□□□□□ -2.12
UBP16YPL072W AGC1Q12482 902 aa1.81□□□□□ -2.12
UBP16YPL072W YPL229WQ99395 206 aa1.81□□□□□ -2.12
UBP16YPL072W IKI3Q06706 1349 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms