RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C YCR043CP25361 127 aa2.75□□□□□ -1.97
LCB4YOR171C CPR3P25719 182 aa2.75□□□□□ -1.97
LCB4YOR171C SNC1P31109 117 aa2.75□□□□□ -1.97
LCB4YOR171C SHE2P36068 246 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
LCB4YOR171C SPL2P38839 148 aa2.75□□□□□ -1.97
LCB4YOR171C MOB1P40484 314 aa2.75□□□□□ -1.97
LCB4YOR171C WWM1P43582 211 aaKnown RBP2.75□□□□□ -1.97
LCB4YOR171C UBC13P52490 153 aa2.75□□□□□ -1.97
LCB4YOR171C AIF1P52923 378 aa2.75□□□□□ -1.97
LCB4YOR171C FLC3P53121 802 aa2.75□□□□□ -1.97
LCB4YOR171C HST4P53688 370 aa2.75□□□□□ -1.97
LCB4YOR171C SWS2P53937 143 aa2.75□□□□□ -1.97
LCB4YOR171C SPR6Q01684 191 aa2.75□□□□□ -1.97
LCB4YOR171C YPL014WQ02606 381 aa2.75□□□□□ -1.97
LCB4YOR171C GMC1Q04399 608 aa2.75□□□□□ -1.97
LCB4YOR171C YMR254CQ04838 102 aa2.75□□□□□ -1.97
LCB4YOR171C DIC1Q06143 298 aa2.75□□□□□ -1.97
LCB4YOR171C MCH1Q07376 486 aa2.75□□□□□ -1.97
LCB4YOR171C YLR012CQ07927 99 aa2.75□□□□□ -1.97
LCB4YOR171C RDL2Q08742 149 aaKnown RBP2.75□□□□□ -1.97
LCB4YOR171C FRE8Q12209 686 aa2.75□□□□□ -1.97
LCB4YOR171C TRM3Q07527 1436 aa2.75□□□□□ -1.97
LCB4YOR171C POM152P39685 1337 aa2.75□□□□□ -1.97
LCB4YOR171C RPL2AP0CX45 254 aaKnown RBP2.75□□□□□ -1.97
LCB4YOR171C RPL2BP0CX46 254 aaKnown RBP2.75□□□□□ -1.97
LCB4YOR171C BAR1P12630 587 aa2.75□□□□□ -1.97
LCB4YOR171C SPO12P17123 173 aa2.75□□□□□ -1.97
LCB4YOR171C MIR1P23641 311 aaKnown RBP2.75□□□□□ -1.97
LCB4YOR171C ATG22P25568 528 aa2.75□□□□□ -1.97
LCB4YOR171C AHC2P25649 128 aa2.75□□□□□ -1.97
LCB4YOR171C SNC2P33328 115 aa2.75□□□□□ -1.97
LCB4YOR171C SOL2P37262 315 aa2.75□□□□□ -1.97
LCB4YOR171C RPF1P38805 295 aaKnown RBP2.75□□□□□ -1.97
LCB4YOR171C STB1P42845 420 aa2.75□□□□□ -1.97
LCB4YOR171C RPA43P46669 326 aa2.75□□□□□ -1.97
LCB4YOR171C RPE1P46969 238 aa2.75□□□□□ -1.97
LCB4YOR171C PMT4P46971 762 aa2.75□□□□□ -1.97
LCB4YOR171C AIM25P47140 327 aa2.75□□□□□ -1.97
LCB4YOR171C AVT4P50944 713 aa2.75□□□□□ -1.97
LCB4YOR171C YGL101WP53144 215 aa2.75□□□□□ -1.97
LCB4YOR171C YGL039WP53183 348 aaKnown RBP2.75□□□□□ -1.97
LCB4YOR171C VHT1P53241 593 aa2.75□□□□□ -1.97
LCB4YOR171C YNR048WP53740 393 aa2.75□□□□□ -1.97
LCB4YOR171C RHO4Q00246 291 aa2.75□□□□□ -1.97
LCB4YOR171C PET191Q02772 108 aa2.75□□□□□ -1.97
LCB4YOR171C AIM36Q03798 255 aa2.75□□□□□ -1.97
LCB4YOR171C RFM1Q12192 310 aa2.75□□□□□ -1.97
LCB4YOR171C ORT1Q12375 292 aa2.75□□□□□ -1.97
LCB4YOR171C ERG24P32462 438 aaKnown RBP2.74□□□□□ -1.97
LCB4YOR171C PDC2P32896 925 aa2.74□□□□□ -1.97
LCB4YOR171C SIP2P34164 415 aaKnown RBP2.74□□□□□ -1.97
LCB4YOR171C GPX2P38143 162 aa2.74□□□□□ -1.97
LCB4YOR171C YEA4P40004 342 aa2.74□□□□□ -1.97
LCB4YOR171C FAU1P40099 211 aa2.74□□□□□ -1.97
LCB4YOR171C SIM1P40472 476 aa2.74□□□□□ -1.97
LCB4YOR171C TES1P41903 349 aaKnown RBP2.74□□□□□ -1.97
LCB4YOR171C YIP1P53039 248 aa2.74□□□□□ -1.97
LCB4YOR171C COF1Q03048 143 aaKnown RBP2.74□□□□□ -1.97
LCB4YOR171C CGI121Q03705 181 aaKnown RBP2.74□□□□□ -1.97
LCB4YOR171C VHS1Q03785 461 aa2.74□□□□□ -1.97
LCB4YOR171C PSK1P31374 1356 aa2.74□□□□□ -1.97
LCB4YOR171C REV3P14284 1504 aa2.73□□□□□ -1.97
LCB4YOR171C ADK1P07170 222 aaKnown RBP2.73□□□□□ -1.97
LCB4YOR171C PMU1P36069 295 aa2.73□□□□□ -1.97
LCB4YOR171C RIM2P38127 377 aa2.73□□□□□ -1.97
LCB4YOR171C YHK8P38776 514 aa2.73□□□□□ -1.97
LCB4YOR171C APQ12P40532 138 aa2.73□□□□□ -1.97
LCB4YOR171C BUD13P46947 266 aaPredicted RBP2.73□□□□□ -1.97
LCB4YOR171C GWT1P47026 490 aa2.73□□□□□ -1.97
LCB4YOR171C SDT1P53078 280 aa2.73□□□□□ -1.97
LCB4YOR171C HHT1P61830 136 aa2.73□□□□□ -1.97
LCB4YOR171C HPT1Q04178 221 aaKnown RBP2.73□□□□□ -1.97
LCB4YOR171C ERP1Q05359 219 aaKnown RBP2.73□□□□□ -1.97
LCB4YOR171C SHH4Q06236 168 aa2.73□□□□□ -1.97
LCB4YOR171C SRL1Q08673 210 aa2.73□□□□□ -1.97
LCB4YOR171C RPO31P04051 1460 aa2.73□□□□□ -1.97
LCB4YOR171C VAR1P02381 398 aa2.73□□□□□ -1.97
LCB4YOR171C PHO85P17157 305 aa2.73□□□□□ -1.97
LCB4YOR171C CCA1P21269 546 aa2.73□□□□□ -1.97
LCB4YOR171C RPC19P28000 142 aaKnown RBP2.73□□□□□ -1.97
LCB4YOR171C SEC17P32602 292 aa2.73□□□□□ -1.97
LCB4YOR171C YOR062CP36025 268 aa2.73□□□□□ -1.97
LCB4YOR171C NAT2P37293 288 aa2.73□□□□□ -1.97
LCB4YOR171C ECM31P38122 312 aa2.73□□□□□ -1.97
LCB4YOR171C YHL044WP38727 235 aa2.73□□□□□ -1.97
LCB4YOR171C GEP4P38812 185 aa2.73□□□□□ -1.97
LCB4YOR171C YND1P40009 630 aa2.73□□□□□ -1.97
LCB4YOR171C OST2P46964 130 aa2.73□□□□□ -1.97
LCB4YOR171C TIM13P53299 105 aa2.73□□□□□ -1.97
LCB4YOR171C HHO1P53551 258 aa2.73□□□□□ -1.97
LCB4YOR171C SLM2P53955 656 aa2.73□□□□□ -1.97
LCB4YOR171C IRC15Q02733 499 aa2.73□□□□□ -1.97
LCB4YOR171C SCS7Q03529 384 aa2.73□□□□□ -1.97
LCB4YOR171C FMP42Q04991 504 aa2.73□□□□□ -1.97
LCB4YOR171C THI20Q08224 551 aa2.73□□□□□ -1.97
LCB4YOR171C SCP1Q08873 200 aa2.73□□□□□ -1.97
LCB4YOR171C FDH1Q08911 376 aa2.73□□□□□ -1.97
LCB4YOR171C MCT1Q12283 360 aa2.73□□□□□ -1.97
LCB4YOR171C MET5P47169 1442 aa2.73□□□□□ -1.97
LCB4YOR171C DRS2P39524 1355 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms