RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C PDE1P22434 369 aa8.45□□□□□ -1.06
SPT20YOL148C MAK32P23060 363 aa8.45□□□□□ -1.06
SPT20YOL148C SSH1P38353 490 aaKnown RBP8.45□□□□□ -1.06
SPT20YOL148C RPP1P38786 293 aa8.45□□□□□ -1.06
SPT20YOL148C SMD3P43321 101 aaKnown RBP8.45□□□□□ -1.06
SPT20YOL148C ERG26P53199 349 aaKnown RBP8.45□□□□□ -1.06
SPT20YOL148C PAU4P53427 120 aa8.45□□□□□ -1.06
SPT20YOL148C SHH3Q04487 196 aa8.45□□□□□ -1.06
SPT20YOL148C NPR1P22211 790 aa8.44□□□□□ -1.06
SPT20YOL148C TRS65P32893 560 aa8.44□□□□□ -1.06
SPT20YOL148C LRO1P40345 661 aa8.44□□□□□ -1.06
SPT20YOL148C BUD8P41698 603 aa8.44□□□□□ -1.06
SPT20YOL148C XYL2Q07993 356 aa8.44□□□□□ -1.06
SPT20YOL148C NAT5Q08689 176 aa8.44□□□□□ -1.06
SPT20YOL148C FCY22Q12119 530 aa8.44□□□□□ -1.06
SPT20YOL148C SME1Q12330 94 aaPredicted RBP8.44□□□□□ -1.06
SPT20YOL148C YLR358CO13565 187 aa8.43□□□□□ -1.06
SPT20YOL148C RPS13P05756 151 aaKnown RBP8.43□□□□□ -1.06
SPT20YOL148C PAU1P0CE88 120 aa8.43□□□□□ -1.06
SPT20YOL148C PAU14P0CE89 120 aa8.43□□□□□ -1.06
SPT20YOL148C PAU6P0CE90 120 aa8.43□□□□□ -1.06
SPT20YOL148C PAU18P0CE91 120 aa8.43□□□□□ -1.06
SPT20YOL148C PAU8P0CE92 120 aa8.43□□□□□ -1.06
SPT20YOL148C PAU11P0CE93 120 aa8.43□□□□□ -1.06
SPT20YOL148C DAL3P32459 195 aa8.43□□□□□ -1.06
SPT20YOL148C YBR096WP38256 230 aa8.43□□□□□ -1.06
SPT20YOL148C UMP1P38293 148 aa8.43□□□□□ -1.06
SPT20YOL148C PAU13P38725 120 aa8.43□□□□□ -1.06
SPT20YOL148C YHR210CP38893 341 aa8.43□□□□□ -1.06
SPT20YOL148C YIL067CP40514 678 aa8.43□□□□□ -1.06
SPT20YOL148C SMK1P41808 388 aa8.43□□□□□ -1.06
SPT20YOL148C PAU10Q03050 120 aa8.43□□□□□ -1.06
SPT20YOL148C ROT1Q03691 256 aa8.43□□□□□ -1.06
SPT20YOL148C THI74Q04083 370 aa8.43□□□□□ -1.06
SPT20YOL148C YFT2Q06676 274 aa8.43□□□□□ -1.06
SPT20YOL148C PAU20Q08322 120 aa8.43□□□□□ -1.06
SPT20YOL148C PAU9Q3E770 120 aa8.43□□□□□ -1.06
SPT20YOL148C PKR1Q03880 122 aaKnown RBP8.43□□□□□ -1.06
SPT20YOL148C YMR082CQ04276 118 aa8.43□□□□□ -1.06
SPT20YOL148C TDH3P00359 332 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
SPT20YOL148C GAS1P22146 559 aaKnown RBP8.42□□□□□ -1.06
SPT20YOL148C RFA1P22336 621 aaKnown RBP8.42□□□□□ -1.06
SPT20YOL148C CPR2P23285 205 aa8.42□□□□□ -1.06
SPT20YOL148C TCA17P32613 152 aa8.42□□□□□ -1.06
SPT20YOL148C YIL152WP40455 235 aa8.42□□□□□ -1.06
SPT20YOL148C GWT1P47026 490 aa8.42□□□□□ -1.06
SPT20YOL148C YGR151CP53287 111 aa8.42□□□□□ -1.06
SPT20YOL148C UBA3Q99344 299 aa8.42□□□□□ -1.06
SPT20YOL148C CCH1P50077 2039 aa8.41□□□□□ -1.06
SPT20YOL148C COX5BP00425 151 aa8.41□□□□□ -1.06
SPT20YOL148C ALG14P38242 237 aa8.41□□□□□ -1.06
SPT20YOL148C ERG25P53045 309 aa8.41□□□□□ -1.06
SPT20YOL148C NIS1P53939 407 aa8.41□□□□□ -1.06
SPT20YOL148C APS2Q00381 147 aa8.41□□□□□ -1.06
SPT20YOL148C INP1Q03694 420 aa8.41□□□□□ -1.06
SPT20YOL148C SWM1Q12379 170 aa8.41□□□□□ -1.06
SPT20YOL148C ERP4Q12450 207 aa8.41□□□□□ -1.06
SPT20YOL148C CTA1P15202 515 aa8.4□□□□□ -1.06
SPT20YOL148C ARO4P32449 370 aaKnown RBP8.4□□□□□ -1.06
SPT20YOL148C GPX1P36014 167 aa8.4□□□□□ -1.06
SPT20YOL148C IRC24P40580 263 aa8.4□□□□□ -1.06
SPT20YOL148C LSB3P43603 459 aaKnown RBP8.4□□□□□ -1.06
SPT20YOL148C YGR066CP53242 292 aa8.4□□□□□ -1.06
SPT20YOL148C MTQ2Q03920 221 aaPredicted RBP8.4□□□□□ -1.06
SPT20YOL148C YDL242WQ07746 117 aa8.4□□□□□ -1.06
SPT20YOL148C CSI2Q08054 341 aa8.4□□□□□ -1.06
SPT20YOL148C HRT1Q08273 121 aa8.4□□□□□ -1.06
SPT20YOL148C PAR32Q12515 295 aaKnown RBP8.4□□□□□ -1.06
SPT20YOL148C ADH2P00331 348 aaKnown RBP8.4□□□□□ -1.07
SPT20YOL148C RFA3P26755 122 aaKnown RBP8.4□□□□□ -1.07
SPT20YOL148C XBP1P40489 647 aa8.4□□□□□ -1.07
SPT20YOL148C PMT3P47190 753 aa8.4□□□□□ -1.07
SPT20YOL148C YGR035CP53222 116 aa8.4□□□□□ -1.07
SPT20YOL148C MCH1Q07376 486 aa8.4□□□□□ -1.07
SPT20YOL148C SPO7P18410 259 aa8.39□□□□□ -1.07
SPT20YOL148C MRS4P23500 304 aa8.39□□□□□ -1.07
SPT20YOL148C SRB5P32585 307 aa8.39□□□□□ -1.07
SPT20YOL148C ERJ5P43613 295 aaPredicted RBP8.39□□□□□ -1.07
SPT20YOL148C RIB4P50861 169 aaPredicted RBP8.39□□□□□ -1.07
SPT20YOL148C HHT1P61830 136 aa8.39□□□□□ -1.07
SPT20YOL148C RCE1Q03530 315 aa8.39□□□□□ -1.07
SPT20YOL148C ERV2Q12284 196 aa8.39□□□□□ -1.07
SPT20YOL148C NUP1P20676 1076 aa8.38□□□□□ -1.07
SPT20YOL148C YEL057CP39983 233 aa8.38□□□□□ -1.07
SPT20YOL148C PIB1Q06651 286 aa8.38□□□□□ -1.07
SPT20YOL148C YLR030WQ07967 263 aa8.38□□□□□ -1.07
SPT20YOL148C PAU23Q07987 124 aa8.38□□□□□ -1.07
SPT20YOL148C WTM2Q12206 467 aa8.38□□□□□ -1.07
SPT20YOL148C PAU17Q12370 124 aa8.38□□□□□ -1.07
SPT20YOL148C ELO2P25358 347 aa8.38□□□□□ -1.07
SPT20YOL148C ISF1P32488 338 aa8.38□□□□□ -1.07
SPT20YOL148C PAD1P33751 242 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
SPT20YOL148C AUR1P36107 401 aaPredicted RBP8.38□□□□□ -1.07
SPT20YOL148C TRM7P38238 310 aaKnown RBP8.38□□□□□ -1.07
SPT20YOL148C ANS1P38832 159 aa8.38□□□□□ -1.07
SPT20YOL148C MNL1P38888 796 aa8.38□□□□□ -1.07
SPT20YOL148C YIL089WP40500 205 aa8.38□□□□□ -1.07
SPT20YOL148C NAS2P40555 220 aa8.38□□□□□ -1.07
SPT20YOL148C YJR011CP47086 261 aaPredicted RBP8.38□□□□□ -1.07
SPT20YOL148C SUT2Q12286 268 aa8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms