RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C PEX34P25584 144 aa1.42□□□□□ -2.18
RPB11YOL005C SGE1P33335 543 aa1.42□□□□□ -2.18
RPB11YOL005C PRX1P34227 261 aaKnown RBP1.42□□□□□ -2.18
RPB11YOL005C YUH1P35127 236 aa1.42□□□□□ -2.18
RPB11YOL005C ECM13P38195 257 aa1.42□□□□□ -2.18
RPB11YOL005C BIG1P38813 335 aa1.42□□□□□ -2.18
RPB11YOL005C MOB1P40484 314 aa1.42□□□□□ -2.18
RPB11YOL005C SNZ3P43545 298 aa1.42□□□□□ -2.18
RPB11YOL005C YJL016WP47072 561 aa1.42□□□□□ -2.18
RPB11YOL005C GOT1Q03554 138 aa1.42□□□□□ -2.18
RPB11YOL005C YPR098CQ06089 161 aa1.42□□□□□ -2.18
RPB11YOL005C KAP95Q06142 861 aaKnown RBP1.42□□□□□ -2.18
RPB11YOL005C ATG17Q06410 417 aa1.42□□□□□ -2.18
RPB11YOL005C RRS1Q08746 203 aaKnown RBP1.42□□□□□ -2.18
RPB11YOL005C RRP36Q12481 300 aaPredicted RBP1.42□□□□□ -2.18
RPB11YOL005C SAS5Q99314 248 aa1.42□□□□□ -2.18
RPB11YOL005C BEM2P39960 2167 aaKnown RBP1.42□□□□□ -2.18
RPB11YOL005C RSR1P13856 272 aa1.41□□□□□ -2.18
RPB11YOL005C PPH21P23594 369 aa1.41□□□□□ -2.18
RPB11YOL005C RCN1P36054 211 aa1.41□□□□□ -2.18
RPB11YOL005C MRPL39P36533 70 aa1.41□□□□□ -2.18
RPB11YOL005C MRX3P38172 270 aa1.41□□□□□ -2.18
RPB11YOL005C OPY1P38271 328 aa1.41□□□□□ -2.18
RPB11YOL005C SMB1P40018 196 aaKnown RBP1.41□□□□□ -2.18
RPB11YOL005C COG3P40094 801 aa1.41□□□□□ -2.18
RPB11YOL005C BNA6P43619 295 aa1.41□□□□□ -2.18
RPB11YOL005C DAN1P47178 298 aa1.41□□□□□ -2.18
RPB11YOL005C CAB4P53332 305 aa1.41□□□□□ -2.18
RPB11YOL005C TIM8P57744 87 aa1.41□□□□□ -2.18
RPB11YOL005C RHO3Q00245 231 aaKnown RBP1.41□□□□□ -2.18
RPB11YOL005C PEX12Q04370 399 aa1.41□□□□□ -2.18
RPB11YOL005C YDR124WQ04608 324 aa1.41□□□□□ -2.18
RPB11YOL005C RRP40Q08285 240 aaKnown RBP1.41□□□□□ -2.18
RPB11YOL005C ABP140Q08641 628 aaKnown RBP1.41□□□□□ -2.18
RPB11YOL005C FKS1P38631 1876 aaKnown RBP1.4□□□□□ -2.19
RPB11YOL005C HAP2P06774 265 aa1.4□□□□□ -2.19
RPB11YOL005C YKR104WP0CE69 306 aa1.4□□□□□ -2.19
RPB11YOL005C SCO1P23833 295 aa1.4□□□□□ -2.19
RPB11YOL005C RNA15P25299 296 aaPredicted RBP1.4□□□□□ -2.19
RPB11YOL005C RME1P32338 300 aaKnown RBP1.4□□□□□ -2.19
RPB11YOL005C URA8P38627 578 aaPredicted RBP1.4□□□□□ -2.19
RPB11YOL005C AVT2P39981 480 aa1.4□□□□□ -2.19
RPB11YOL005C YAR1P46683 200 aa1.4□□□□□ -2.19
RPB11YOL005C USE1P53146 245 aa1.4□□□□□ -2.19
RPB11YOL005C YGL034CP53186 121 aa1.4□□□□□ -2.19
RPB11YOL005C COS6P53344 381 aa1.4□□□□□ -2.19
RPB11YOL005C SNZ2P53824 298 aa1.4□□□□□ -2.19
RPB11YOL005C RTC4P53850 401 aa1.4□□□□□ -2.19
RPB11YOL005C SDO1Q07953 250 aaKnown RBP1.4□□□□□ -2.19
RPB11YOL005C RRT8Q08219 342 aa1.4□□□□□ -2.19
RPB11YOL005C YOR029WQ12243 111 aa1.4□□□□□ -2.19
RPB11YOL005C MHT1Q12525 324 aa1.4□□□□□ -2.19
RPB11YOL005C YHR086W-AQ3E746 53 aa1.4□□□□□ -2.19
RPB11YOL005C IRA2P19158 3079 aa1.39□□□□□ -2.19
RPB11YOL005C MSF1P08425 469 aa1.39□□□□□ -2.19
RPB11YOL005C YHR032W-AP0C5N6 59 aa1.39□□□□□ -2.19
RPB11YOL005C PRS4P38063 326 aaPredicted RBP1.39□□□□□ -2.19
RPB11YOL005C FZO1P38297 855 aa1.39□□□□□ -2.19
RPB11YOL005C TIF34P40217 347 aaKnown RBP1.39□□□□□ -2.19
RPB11YOL005C RSM25P40496 264 aa1.39□□□□□ -2.19
RPB11YOL005C OST2P46964 130 aa1.39□□□□□ -2.19
RPB11YOL005C MRH4P53166 561 aa1.39□□□□□ -2.19
RPB11YOL005C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
RPB11YOL005C CTF19Q02732 369 aa1.39□□□□□ -2.19
RPB11YOL005C SPG3Q04398 127 aaPredicted RBP1.39□□□□□ -2.19
RPB11YOL005C SPG4Q04438 115 aa1.39□□□□□ -2.19
RPB11YOL005C FUS2Q05670 677 aa1.39□□□□□ -2.19
RPB11YOL005C GPM2Q12008 311 aa1.39□□□□□ -2.19
RPB11YOL005C YOR283WQ12040 230 aaKnown RBP1.39□□□□□ -2.19
RPB11YOL005C EMP46Q12396 444 aa1.39□□□□□ -2.19
RPB11YOL005C MOT1P32333 1867 aa1.39□□□□□ -2.19
RPB11YOL005C ACC1Q00955 2233 aaKnown RBP1.38□□□□□ -2.19
RPB11YOL005C TOR2P32600 2474 aaKnown RBP1.38□□□□□ -2.19
RPB11YOL005C JIP3O13555 125 aa1.38□□□□□ -2.19
RPB11YOL005C CUP1-1P0CX80 61 aa1.38□□□□□ -2.19
RPB11YOL005C CUP1-2P0CX81 61 aa1.38□□□□□ -2.19
RPB11YOL005C YCR102CP25608 368 aa1.38□□□□□ -2.19
RPB11YOL005C HOM6P31116 359 aaKnown RBP1.38□□□□□ -2.19
RPB11YOL005C YET1P35723 206 aa1.38□□□□□ -2.19
RPB11YOL005C MSA2P36157 363 aa1.38□□□□□ -2.19
RPB11YOL005C YEL075CP39972 122 aa1.38□□□□□ -2.19
RPB11YOL005C YER189WP40104 122 aa1.38□□□□□ -2.19
RPB11YOL005C MRPL49P40858 161 aaPredicted RBP1.38□□□□□ -2.19
RPB11YOL005C ERG10P41338 398 aaKnown RBP1.38□□□□□ -2.19
RPB11YOL005C GLG2P47011 380 aa1.38□□□□□ -2.19
RPB11YOL005C SNX4P47057 423 aa1.38□□□□□ -2.19
RPB11YOL005C EMC4P53073 190 aa1.38□□□□□ -2.19
RPB11YOL005C TIM13P53299 105 aa1.38□□□□□ -2.19
RPB11YOL005C RSM10Q03201 203 aa1.38□□□□□ -2.19
RPB11YOL005C MZM1Q03429 123 aaPredicted RBP1.38□□□□□ -2.19
RPB11YOL005C CGI121Q03705 181 aaKnown RBP1.38□□□□□ -2.19
RPB11YOL005C COQ10Q08058 207 aa1.38□□□□□ -2.19
RPB11YOL005C SYC1Q08553 188 aaPredicted RBP1.38□□□□□ -2.19
RPB11YOL005C SNU23Q12368 194 aaPredicted RBP1.38□□□□□ -2.19
RPB11YOL005C EMC6Q12431 108 aa1.38□□□□□ -2.19
RPB11YOL005C SNF8Q12483 233 aa1.38□□□□□ -2.19
RPB11YOL005C MSB2P32334 1306 aa1.38□□□□□ -2.19
RPB11YOL005C SGA1P08019 549 aa1.37□□□□□ -2.19
RPB11YOL005C NRG2P38082 220 aa1.37□□□□□ -2.19
RPB11YOL005C YBR096WP38256 230 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms