RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W YLR126CQ12288 251 aa0.98□□□□□ -2.25
BER1YLR412W QCR8P08525 94 aa0.97□□□□□ -2.25
BER1YLR412W GPA2P10823 449 aa0.97□□□□□ -2.25
BER1YLR412W YKL075CP36083 450 aa0.97□□□□□ -2.25
BER1YLR412W NUP57P48837 541 aa0.97□□□□□ -2.25
BER1YLR412W YML096WQ04489 525 aa0.97□□□□□ -2.25
BER1YLR412W SSQ1Q05931 657 aaPredicted RBP0.97□□□□□ -2.25
BER1YLR412W RIO1Q12196 484 aaKnown RBP0.97□□□□□ -2.25
BER1YLR412W FZF1P32805 299 aa0.96□□□□□ -2.26
BER1YLR412W RIB1P38066 345 aa0.96□□□□□ -2.26
BER1YLR412W ICE2P40499 491 aa0.96□□□□□ -2.26
BER1YLR412W BOL2P53082 120 aa0.96□□□□□ -2.26
BER1YLR412W TRM12Q04235 462 aa0.96□□□□□ -2.26
BER1YLR412W SPG3Q04398 127 aaPredicted RBP0.96□□□□□ -2.26
BER1YLR412W RPL27BP0C2H7 136 aaKnown RBP0.95□□□□□ -2.26
BER1YLR412W RIB7P33312 244 aa0.95□□□□□ -2.26
BER1YLR412W YNL217WP40152 326 aa0.95□□□□□ -2.26
BER1YLR412W PGD1P40356 397 aa0.95□□□□□ -2.26
BER1YLR412W YRB2P40517 327 aa0.95□□□□□ -2.26
BER1YLR412W KAP95Q06142 861 aaKnown RBP0.95□□□□□ -2.26
BER1YLR412W PSF1Q12488 208 aa0.95□□□□□ -2.26
BER1YLR412W YPR170W-BP0C5R9 85 aa0.94□□□□□ -2.26
BER1YLR412W TCD1P38756 429 aa0.94□□□□□ -2.26
BER1YLR412W RSM25P40496 264 aa0.94□□□□□ -2.26
BER1YLR412W HOC1P47124 396 aa0.94□□□□□ -2.26
BER1YLR412W ABF2Q02486 183 aa0.94□□□□□ -2.26
BER1YLR412W VPS21P36017 210 aaKnown RBP0.93□□□□□ -2.26
BER1YLR412W BNA6P43619 295 aa0.93□□□□□ -2.26
BER1YLR412W GPI8P49018 411 aa0.93□□□□□ -2.26
BER1YLR412W AIF1P52923 378 aa0.93□□□□□ -2.26
BER1YLR412W CYR1P08678 2026 aaKnown RBP0.93□□□□□ -2.26
BER1YLR412W RPT5P33297 434 aaKnown RBP0.92□□□□□ -2.26
BER1YLR412W GAA1P39012 614 aa0.92□□□□□ -2.26
BER1YLR412W PEX17P40155 199 aa0.92□□□□□ -2.26
BER1YLR412W RRP36Q12481 300 aaPredicted RBP0.92□□□□□ -2.26
BER1YLR412W CPA1P07258 411 aaKnown RBP0.91□□□□□ -2.26
BER1YLR412W TMA19P35691 167 aaKnown RBP0.91□□□□□ -2.26
BER1YLR412W MPA43P53583 542 aaPredicted RBP0.91□□□□□ -2.26
BER1YLR412W YNL010WP53981 241 aaKnown RBP0.91□□□□□ -2.26
BER1YLR412W YMD8Q03697 442 aa0.91□□□□□ -2.26
BER1YLR412W PAM18Q07914 168 aa0.91□□□□□ -2.26
BER1YLR412W VAR1P02381 398 aa0.9□□□□□ -2.27
BER1YLR412W REP2P03872 296 aa0.9□□□□□ -2.27
BER1YLR412W IRC22P40006 225 aa0.9□□□□□ -2.27
BER1YLR412W YJR149WP47177 404 aa0.9□□□□□ -2.27
BER1YLR412W DOC1P53068 250 aa0.9□□□□□ -2.27
BER1YLR412W YNR077CP53758 84 aa0.9□□□□□ -2.27
BER1YLR412W YNL134CP53912 376 aaKnown RBP0.9□□□□□ -2.27
BER1YLR412W RRT8Q08219 342 aa0.9□□□□□ -2.27
BER1YLR412W YPL162CQ12042 273 aa0.9□□□□□ -2.27
BER1YLR412W ATG31Q12421 196 aa0.9□□□□□ -2.27
BER1YLR412W MET5P47169 1442 aa0.89□□□□□ -2.27
BER1YLR412W MRPS28P21771 286 aa0.89□□□□□ -2.27
BER1YLR412W SRB4P32569 687 aa0.89□□□□□ -2.27
BER1YLR412W URA8P38627 578 aaPredicted RBP0.89□□□□□ -2.27
BER1YLR412W MCM22P47167 239 aa0.89□□□□□ -2.27
BER1YLR412W TRM9P49957 279 aa0.89□□□□□ -2.27
BER1YLR412W SAY1P53324 424 aa0.89□□□□□ -2.27
BER1YLR412W MRPL50P53724 139 aa0.89□□□□□ -2.27
BER1YLR412W UBC7Q02159 165 aa0.89□□□□□ -2.27
BER1YLR412W ANT1Q06497 328 aa0.89□□□□□ -2.27
BER1YLR412W PDR18P53756 1333 aa0.89□□□□□ -2.27
BER1YLR412W ATG22P25568 528 aa0.88□□□□□ -2.27
BER1YLR412W YET1P35723 206 aa0.88□□□□□ -2.27
BER1YLR412W DOG2P38773 246 aa0.88□□□□□ -2.27
BER1YLR412W YER076CP40049 302 aa0.88□□□□□ -2.27
BER1YLR412W SNZ1Q03148 297 aa0.88□□□□□ -2.27
BER1YLR412W LPP1Q04396 274 aa0.88□□□□□ -2.27
BER1YLR412W KRE28Q04431 385 aa0.88□□□□□ -2.27
BER1YLR412W YLR156WP0CE96 114 aa0.87□□□□□ -2.27
BER1YLR412W YLR159WP0CE97 114 aa0.87□□□□□ -2.27
BER1YLR412W YLR161WP0CE98 114 aa0.87□□□□□ -2.27
BER1YLR412W MRPL25P23369 157 aa0.87□□□□□ -2.27
BER1YLR412W YUH1P35127 236 aa0.87□□□□□ -2.27
BER1YLR412W CUE1P38428 203 aa0.87□□□□□ -2.27
BER1YLR412W RPL37AP49166 88 aaKnown RBP0.87□□□□□ -2.27
BER1YLR412W DID2P69771 204 aa0.87□□□□□ -2.27
BER1YLR412W YLR173WQ06247 608 aa0.87□□□□□ -2.27
BER1YLR412W NSA1P53136 463 aaPredicted RBP0.86□□□□□ -2.27
BER1YLR412W YML108WQ03759 105 aa0.86□□□□□ -2.27
BER1YLR412W MSB2P32334 1306 aa0.86□□□□□ -2.27
BER1YLR412W NTF2P33331 125 aaKnown RBP0.85□□□□□ -2.27
BER1YLR412W LDB7P38210 180 aa0.85□□□□□ -2.27
BER1YLR412W UMP1P38293 148 aa0.85□□□□□ -2.27
BER1YLR412W POP4P38336 279 aa0.85□□□□□ -2.27
BER1YLR412W ERJ5P43613 295 aaPredicted RBP0.85□□□□□ -2.27
BER1YLR412W NOP13P53883 403 aaKnown RBP RIP-Chip data0.85□□□□□ -2.27not detected
BER1YLR412W LSO2Q3E772 92 aaKnown RBP0.85□□□□□ -2.27
BER1YLR412W TUS1Q06412 1307 aa0.85□□□□□ -2.27
BER1YLR412W BCY1P07278 416 aaKnown RBP0.84□□□□□ -2.27
BER1YLR412W CDC10P25342 322 aaKnown RBP0.84□□□□□ -2.27
BER1YLR412W TFC1P32367 649 aa0.84□□□□□ -2.27
BER1YLR412W MRPL28P36527 147 aa0.84□□□□□ -2.27
BER1YLR412W MRPL17P36528 281 aa0.84□□□□□ -2.27
BER1YLR412W RIO2P40160 425 aaKnown RBP0.84□□□□□ -2.27
BER1YLR412W POP3P53833 195 aaPredicted RBP0.84□□□□□ -2.27
BER1YLR412W GAS3Q03655 524 aa0.84□□□□□ -2.27
BER1YLR412W YDR248CQ03786 193 aa0.84□□□□□ -2.27
BER1YLR412W DRS2P39524 1355 aa0.83□□□□□ -2.28
BER1YLR412W RPO26P20435 155 aa0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 91 ms