RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	PRB1	P09232	635 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	UBI4	P0CG63	381 aa	Known RBP	4.6	□□□□□ -1.67
CTR3	YLR411W	RPL40A	P0CH08	128 aa	Known RBP	4.6	□□□□□ -1.67
CTR3	YLR411W	RPL40B	P0CH09	128 aa	Known RBP	4.6	□□□□□ -1.67
CTR3	YLR411W	NAM2	P11325	894 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	SEC22	P22214	214 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	YNK1	P36010	153 aa	Known RBP	4.6	□□□□□ -1.67
CTR3	YLR411W	HXT14	P42833	540 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	OGG1	P53397	376 aa	Predicted RBP	4.6	□□□□□ -1.67
CTR3	YLR411W	MPP6	P53725	186 aa	Predicted RBP	4.6	□□□□□ -1.67
CTR3	YLR411W	FMP41	P53889	259 aa	Known RBP	4.6	□□□□□ -1.67
CTR3	YLR411W	APJ1	P53940	528 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	ACT1	P60010	375 aa	Known RBP	4.6	□□□□□ -1.67
CTR3	YLR411W	CTF19	Q02732	369 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	RLM1	Q12224	676 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	TFC7	Q12415	435 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	EAF3	Q12432	401 aa		4.6	□□□□□ -1.67
CTR3	YLR411W	KIN28	P06242	306 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	HIP1	P06775	603 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	GAL7	P08431	366 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	ARO3	P14843	370 aa	Known RBP	4.59	□□□□□ -1.67
CTR3	YLR411W	URA6	P15700	204 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	MSK1	P32048	576 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	SRY1	P36007	326 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	TAE1	P38340	232 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	ECM34	P38728	170 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	SPC25	P40014	221 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	EMC5	P40540	141 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	CIN2	P46670	268 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	IBA57	P47158	497 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	MCM22	P47167	239 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	YNR062C	P53748	327 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	YMR279C	Q03263	540 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	HNT1	Q04344	158 aa	Known RBP	4.59	□□□□□ -1.67
CTR3	YLR411W	RTT103	Q05543	409 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	SRO7	Q12038	1033 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	ORT1	Q12375	292 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	PET20	Q99373	253 aa		4.59	□□□□□ -1.67
CTR3	YLR411W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CTR3	YLR411W	VMA5	P31412	392 aa	Known RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CTR3	YLR411W	FMT1	P32785	401 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	SNC2	P33328	115 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	SPT10	P35208	640 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	SRP102	P36057	244 aa	Predicted RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	PAN3	P36102	679 aa	Predicted RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	VPS51	P36116	164 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	GPI16	P38875	610 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	YAL037W	P39728	267 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	YIL067C	P40514	678 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	OTU1	P43558	301 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	GPI14	P47088	403 aa	Known RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	YGR026W	P53217	278 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	TIM21	P53220	239 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	ART5	P53244	586 aa	Known RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	YLR152C	P54072	576 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	FIT1	Q04433	528 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	RBS1	Q05672	457 aa	Known RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	SYM1	Q06563	197 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	BER1	Q06688	274 aa	Known RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	COQ10	Q08058	207 aa		4.58	□□□□□ -1.68
CTR3	YLR411W	AIM45	Q12480	344 aa	Known RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	SLH1	P53327	1967 aa	Known RBP	4.58	□□□□□ -1.68
CTR3	YLR411W	SPT15	P13393	240 aa	Known RBP	4.57	□□□□□ -1.68
CTR3	YLR411W	YPK2	P18961	677 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	GPI12	P23797	304 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	PET18	P25362	215 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
CTR3	YLR411W	MDL1	P33310	695 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	AVT5	P38176	459 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	POP8	P38208	133 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	RPL10	P41805	221 aa	Known RBP	4.57	□□□□□ -1.68
CTR3	YLR411W	SOL1	P50278	321 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	MEH1	Q02205	184 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	PEX25	Q02969	394 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	MRX8	Q05473	314 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	BNA5	Q05979	453 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	SRL2	Q12020	392 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	DGK1	Q12382	290 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	ODC2	Q99297	307 aa		4.57	□□□□□ -1.68
CTR3	YLR411W	RPL15A	P05748	204 aa	Known RBP	4.56	□□□□□ -1.68
CTR3	YLR411W	YCR007C	P25354	239 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	RFA3	P26755	122 aa	Known RBP	4.56	□□□□□ -1.68
CTR3	YLR411W	YBL010C	P32788	280 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	CLB6	P32943	380 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
CTR3	YLR411W	MRPL4	P36517	319 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	ATG8	P38182	117 aa	RIP-Chip data	4.56	□□□□□ -1.68	not detected
CTR3	YLR411W	YPT31	P38555	223 aa	Known RBP	4.56	□□□□□ -1.68
CTR3	YLR411W	DLS1	P40366	167 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	YJR111C	P47148	283 aa	Known RBP	4.56	□□□□□ -1.68
CTR3	YLR411W	BXI1	P48558	297 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	UFD1	P53044	361 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	YGR042W	P53227	271 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	AAH1	P53909	347 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	NCE101	Q02820	53 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	RSM10	Q03201	203 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	RVB1	Q03940	463 aa	Known RBP	4.56	□□□□□ -1.68
CTR3	YLR411W	YML096W	Q04489	525 aa		4.56	□□□□□ -1.68
CTR3	YLR411W	NMA1	Q06178	401 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 89.4 ms