RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C YCR099CP25657 155 aa2.88□□□□□ -1.95
VPS33YLR396C CLB6P32943 380 aa2.88□□□□□ -1.95
VPS33YLR396C SNC2P33328 115 aa2.88□□□□□ -1.95
VPS33YLR396C EFM1P38732 585 aa2.88□□□□□ -1.95
VPS33YLR396C ASP1P38986 381 aaPredicted RBP2.88□□□□□ -1.95
VPS33YLR396C CIN5P40917 295 aa2.88□□□□□ -1.95
VPS33YLR396C ADO1P47143 340 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C TIS11P47977 285 aa2.88□□□□□ -1.95
VPS33YLR396C SYF2P53277 215 aaPredicted RBP2.88□□□□□ -1.95
VPS33YLR396C MTM1P53320 366 aa2.88□□□□□ -1.95
VPS33YLR396C CWC27Q02770 301 aa2.88□□□□□ -1.95
VPS33YLR396C CWC21Q03375 135 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C YLR099W-AQ3E798 87 aa2.88□□□□□ -1.95
VPS33YLR396C HIS1P00498 297 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C HTB1P02293 131 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C HTB2P02294 131 aa2.88□□□□□ -1.95
VPS33YLR396C RPL9AP05738 191 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C SPT3P06844 337 aa2.88□□□□□ -1.95
VPS33YLR396C PUT1P09368 476 aa2.88□□□□□ -1.95
VPS33YLR396C URA6P15700 204 aa2.88□□□□□ -1.95
VPS33YLR396C RNA15P25299 296 aaPredicted RBP2.88□□□□□ -1.95
VPS33YLR396C ARO2P28777 376 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C MRP17P28778 131 aa2.88□□□□□ -1.95
VPS33YLR396C PAD1P33751 242 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
VPS33YLR396C SFK1P35735 353 aa2.88□□□□□ -1.95
VPS33YLR396C DOA1P36037 715 aa2.88□□□□□ -1.95
VPS33YLR396C CAT5P41735 233 aa2.88□□□□□ -1.95
VPS33YLR396C SFH5P47008 294 aa2.88□□□□□ -1.95
VPS33YLR396C RPL9BP51401 191 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C MPA43P53583 542 aaPredicted RBP2.88□□□□□ -1.95
VPS33YLR396C PRM1P53835 661 aa2.88□□□□□ -1.95
VPS33YLR396C ASI3P53983 676 aa2.88□□□□□ -1.95
VPS33YLR396C KTR6P54070 446 aa2.88□□□□□ -1.95
VPS33YLR396C ERO1Q03103 563 aa2.88□□□□□ -1.95
VPS33YLR396C MZM1Q03429 123 aaPredicted RBP2.88□□□□□ -1.95
VPS33YLR396C CUE4Q04201 117 aaPredicted RBP2.88□□□□□ -1.95
VPS33YLR396C SDO1Q07953 250 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C TPT1Q12272 230 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C RRP42Q12277 265 aaPredicted RBP2.88□□□□□ -1.95
VPS33YLR396C PAR32Q12515 295 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C YIL134C-AQ45U18 67 aa2.88□□□□□ -1.95
VPS33YLR396C SRN2Q99176 213 aa2.88□□□□□ -1.95
VPS33YLR396C TRP1P00912 224 aa2.87□□□□□ -1.95
VPS33YLR396C CYC3P06182 269 aa2.87□□□□□ -1.95
VPS33YLR396C ADH3P07246 375 aaKnown RBP2.87□□□□□ -1.95
VPS33YLR396C RPL1AP0CX43 217 aaKnown RBP2.87□□□□□ -1.95
VPS33YLR396C RPL1BP0CX44 217 aaKnown RBP2.87□□□□□ -1.95
VPS33YLR396C SEC59P20048 519 aa2.87□□□□□ -1.95
VPS33YLR396C MSK1P32048 576 aa2.87□□□□□ -1.95
VPS33YLR396C SEC17P32602 292 aa2.87□□□□□ -1.95
VPS33YLR396C COS9P36034 407 aa2.87□□□□□ -1.95
VPS33YLR396C SHE2P36068 246 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
VPS33YLR396C SHE1P38200 338 aa2.87□□□□□ -1.95
VPS33YLR396C PTH1P38876 190 aaKnown RBP2.87□□□□□ -1.95
VPS33YLR396C ABM1P47146 123 aa2.87□□□□□ -1.95
VPS33YLR396C IBA57P47158 497 aa2.87□□□□□ -1.95
VPS33YLR396C SOL1P50278 321 aa2.87□□□□□ -1.95
VPS33YLR396C UFD1P53044 361 aa2.87□□□□□ -1.95
VPS33YLR396C YGL114WP53134 725 aa2.87□□□□□ -1.95
VPS33YLR396C RHO5P53879 331 aaKnown RBP2.87□□□□□ -1.95
VPS33YLR396C MTQ1P53944 314 aa2.87□□□□□ -1.95
VPS33YLR396C CYT2Q00873 224 aa2.87□□□□□ -1.95
VPS33YLR396C SPP2Q02521 185 aa2.87□□□□□ -1.95
VPS33YLR396C STD1Q02794 444 aa2.87□□□□□ -1.95
VPS33YLR396C SEC13Q04491 297 aaKnown RBP2.87□□□□□ -1.95
VPS33YLR396C BOP2Q06150 570 aa2.87□□□□□ -1.95
VPS33YLR396C KEI1Q06346 221 aa2.87□□□□□ -1.95
VPS33YLR396C KIN28P06242 306 aa2.86□□□□□ -1.95
VPS33YLR396C EPT1P22140 391 aa2.86□□□□□ -1.95
VPS33YLR396C ATG15P25641 520 aa2.86□□□□□ -1.95
VPS33YLR396C AHC2P25649 128 aa2.86□□□□□ -1.95
VPS33YLR396C SUR1P33300 382 aa2.86□□□□□ -1.95
VPS33YLR396C NTF2P33331 125 aaKnown RBP2.86□□□□□ -1.95
VPS33YLR396C AIM29P36154 155 aa2.86□□□□□ -1.95
VPS33YLR396C SHG1P38337 142 aa2.86□□□□□ -1.95
VPS33YLR396C GPI16P38875 610 aa2.86□□□□□ -1.95
VPS33YLR396C SIM1P40472 476 aa2.86□□□□□ -1.95
VPS33YLR396C GLC8P41818 229 aa2.86□□□□□ -1.95
VPS33YLR396C RPA34P47006 233 aaPredicted RBP2.86□□□□□ -1.95
VPS33YLR396C STE24P47154 453 aa2.86□□□□□ -1.95
VPS33YLR396C YJR149WP47177 404 aa2.86□□□□□ -1.95
VPS33YLR396C TIM21P53220 239 aa2.86□□□□□ -1.95
VPS33YLR396C SHY1P53266 389 aa2.86□□□□□ -1.95
VPS33YLR396C NRK1P53915 240 aa2.86□□□□□ -1.95
VPS33YLR396C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
VPS33YLR396C YMR253CQ04835 414 aa2.86□□□□□ -1.95
VPS33YLR396C CDD1Q06549 142 aa2.86□□□□□ -1.95
VPS33YLR396C FYV7Q12247 151 aa2.86□□□□□ -1.95
VPS33YLR396C YNR034W-AQ3E841 98 aa2.86□□□□□ -1.95
VPS33YLR396C MEX67Q99257 599 aaKnown RBP2.86□□□□□ -1.95
VPS33YLR396C HAP2P06774 265 aa2.86□□□□□ -1.95
VPS33YLR396C RPL31AP0C2H8 113 aaKnown RBP2.86□□□□□ -1.95
VPS33YLR396C RPS8AP0CX39 200 aaKnown RBP2.86□□□□□ -1.95
VPS33YLR396C RPS8BP0CX40 200 aaKnown RBP2.86□□□□□ -1.95
VPS33YLR396C PET18P25362 215 aa2.86□□□□□ -1.95
VPS33YLR396C EHD3P28817 500 aa2.86□□□□□ -1.95
VPS33YLR396C SSH1P38353 490 aaKnown RBP2.86□□□□□ -1.95
VPS33YLR396C FLX1P40464 311 aa2.86□□□□□ -1.95
VPS33YLR396C EMC5P40540 141 aa2.86□□□□□ -1.95
VPS33YLR396C NUP57P48837 541 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms