RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C RDR1Q08904 546 aa3.97□□□□□ -1.77
TVP38YKR088C DCN1Q12395 269 aa3.97□□□□□ -1.77
TVP38YKR088C AIM45Q12480 344 aaKnown RBP3.97□□□□□ -1.77
TVP38YKR088C YLR146W-AQ2V2P1 62 aa3.97□□□□□ -1.77
TVP38YKR088C OPI3P05375 206 aa3.96□□□□□ -1.78
TVP38YKR088C RPL20AP0CX23 172 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C RPL20BP0CX24 172 aaPredicted RBP3.96□□□□□ -1.78
TVP38YKR088C YER190C-BP0CX94 160 aa3.96□□□□□ -1.78
TVP38YKR088C YEL077W-AP0CX95 160 aa3.96□□□□□ -1.78
TVP38YKR088C YGR296C-BP0CX96 160 aa3.96□□□□□ -1.78
TVP38YKR088C YPL283W-BP0CX97 160 aa3.96□□□□□ -1.78
TVP38YKR088C YPR204C-AP0CX98 160 aa3.96□□□□□ -1.78
TVP38YKR088C SEC59P20048 519 aa3.96□□□□□ -1.78
TVP38YKR088C PPH21P23594 369 aa3.96□□□□□ -1.78
TVP38YKR088C ADH7P25377 361 aa3.96□□□□□ -1.78
TVP38YKR088C ARO4P32449 370 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C SCM4P32564 187 aa3.96□□□□□ -1.78
TVP38YKR088C MTC7P32633 139 aa3.96□□□□□ -1.78
TVP38YKR088C NTF2P33331 125 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C SSS1P35179 80 aa3.96□□□□□ -1.78
TVP38YKR088C GPX1P36014 167 aa3.96□□□□□ -1.78
TVP38YKR088C FMP46P36141 133 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C MRPL4P36517 319 aa3.96□□□□□ -1.78
TVP38YKR088C YBR013CP38215 129 aa3.96□□□□□ -1.78
TVP38YKR088C YEA6P39953 335 aa3.96□□□□□ -1.78
TVP38YKR088C LSM4P40070 187 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C YIL067CP40514 678 aa3.96□□□□□ -1.78
TVP38YKR088C NAS2P40555 220 aa3.96□□□□□ -1.78
TVP38YKR088C CFD1P40558 293 aa3.96□□□□□ -1.78
TVP38YKR088C PAU15P40585 124 aa3.96□□□□□ -1.78
TVP38YKR088C PUS4P48567 403 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C TAF4P50105 388 aa3.96□□□□□ -1.78
TVP38YKR088C UFD1P53044 361 aa3.96□□□□□ -1.78
TVP38YKR088C PDR16P53860 351 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C TDA7P53882 636 aaPredicted RBP3.96□□□□□ -1.78
TVP38YKR088C RHO3Q00245 231 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C MEH1Q02205 184 aa3.96□□□□□ -1.78
TVP38YKR088C MRPS17Q03246 237 aaPredicted RBP3.96□□□□□ -1.78
TVP38YKR088C TMA23Q03525 211 aa3.96□□□□□ -1.78
TVP38YKR088C YDR248CQ03786 193 aa3.96□□□□□ -1.78
TVP38YKR088C YDR415CQ04033 374 aaPredicted RBP3.96□□□□□ -1.78
TVP38YKR088C HNT1Q04344 158 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C ERP1Q05359 219 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C NNT1Q05874 261 aa3.96□□□□□ -1.78
TVP38YKR088C SNA4Q07549 140 aa3.96□□□□□ -1.78
TVP38YKR088C COQ10Q08058 207 aa3.96□□□□□ -1.78
TVP38YKR088C LEU9Q12166 604 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C MCT1Q12283 360 aa3.96□□□□□ -1.78
TVP38YKR088C NAG1Q8TGN9 163 aa3.96□□□□□ -1.78
TVP38YKR088C MEX67Q99257 599 aaKnown RBP3.96□□□□□ -1.78
TVP38YKR088C CCH1P50077 2039 aa3.95□□□□□ -1.78
TVP38YKR088C QCR2P07257 368 aa3.95□□□□□ -1.78
TVP38YKR088C SGA1P08019 549 aa3.95□□□□□ -1.78
TVP38YKR088C CTA1P15202 515 aa3.95□□□□□ -1.78
TVP38YKR088C CPR2P23285 205 aa3.95□□□□□ -1.78
TVP38YKR088C URK1P27515 501 aa3.95□□□□□ -1.78
TVP38YKR088C ERG3P32353 365 aa3.95□□□□□ -1.78
TVP38YKR088C AGA2P32781 87 aa3.95□□□□□ -1.78
TVP38YKR088C YNK1P36010 153 aaKnown RBP3.95□□□□□ -1.78
TVP38YKR088C UMP1P38293 148 aa3.95□□□□□ -1.78
TVP38YKR088C EHT1P38295 451 aa3.95□□□□□ -1.78
TVP38YKR088C SSH1P38353 490 aaKnown RBP3.95□□□□□ -1.78
TVP38YKR088C YPT31P38555 223 aaKnown RBP3.95□□□□□ -1.78
TVP38YKR088C RRP3P38712 501 aaKnown RBP3.95□□□□□ -1.78
TVP38YKR088C MNL1P38888 796 aa3.95□□□□□ -1.78
TVP38YKR088C RPL13BP40212 199 aaKnown RBP3.95□□□□□ -1.78
TVP38YKR088C AIM24P47127 394 aa3.95□□□□□ -1.78
TVP38YKR088C YGL185CP53100 379 aa3.95□□□□□ -1.78
TVP38YKR088C YIF1P53845 314 aaKnown RBP3.95□□□□□ -1.78
TVP38YKR088C EGD1Q02642 157 aaKnown RBP3.95□□□□□ -1.78
TVP38YKR088C NCE101Q02820 53 aa3.95□□□□□ -1.78
TVP38YKR088C CAB5Q03941 241 aa3.95□□□□□ -1.78
TVP38YKR088C RTT103Q05543 409 aa3.95□□□□□ -1.78
TVP38YKR088C BNA5Q05979 453 aa3.95□□□□□ -1.78
TVP38YKR088C CTR3Q06686 241 aa3.95□□□□□ -1.78
TVP38YKR088C YPL272CQ08984 517 aa3.95□□□□□ -1.78
TVP38YKR088C RLM1Q12224 676 aa3.95□□□□□ -1.78
TVP38YKR088C YCT1Q12235 531 aa3.95□□□□□ -1.78
TVP38YKR088C VAM3Q12241 283 aa3.95□□□□□ -1.78
TVP38YKR088C YDR262WQ12331 272 aa3.95□□□□□ -1.78
TVP38YKR088C YLR118CQ12354 227 aa3.95□□□□□ -1.78
TVP38YKR088C RPL13AQ12690 199 aaPredicted RBP3.95□□□□□ -1.78
TVP38YKR088C SPT15P13393 240 aaKnown RBP3.94□□□□□ -1.78
TVP38YKR088C STE18P18852 110 aa3.94□□□□□ -1.78
TVP38YKR088C RPB8P20436 146 aa3.94□□□□□ -1.78
TVP38YKR088C LAC1P28496 418 aa3.94□□□□□ -1.78
TVP38YKR088C FAA1P30624 700 aaKnown RBP3.94□□□□□ -1.78
TVP38YKR088C NRP1P32770 719 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
TVP38YKR088C SRP102P36057 244 aaPredicted RBP3.94□□□□□ -1.78
TVP38YKR088C RIB5P38145 238 aa3.94□□□□□ -1.78
TVP38YKR088C MED6P38782 295 aa3.94□□□□□ -1.78
TVP38YKR088C YEA4P40004 342 aa3.94□□□□□ -1.78
TVP38YKR088C SLZ1P40167 298 aa3.94□□□□□ -1.78
TVP38YKR088C LRO1P40345 661 aa3.94□□□□□ -1.78
TVP38YKR088C MOB1P40484 314 aa3.94□□□□□ -1.78
TVP38YKR088C ZIM17P42844 174 aa3.94□□□□□ -1.78
TVP38YKR088C ERJ5P43613 295 aaPredicted RBP3.94□□□□□ -1.78
TVP38YKR088C ASK10P48361 1146 aa3.94□□□□□ -1.78
TVP38YKR088C BNS1P50084 137 aa3.94□□□□□ -1.78
TVP38YKR088C AVT4P50944 713 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms