RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	HNT1	Q04344	158 aa	Known RBP	2.26	□□□□□ -2.05
VHR1	YIL056W	LOA1	Q06508	300 aa		2.26	□□□□□ -2.05
VHR1	YIL056W	TFC7	Q12415	435 aa		2.26	□□□□□ -2.05
VHR1	YIL056W	IGO2	Q9P305	131 aa		2.26	□□□□□ -2.05
VHR1	YIL056W	Q0144	Q9ZZW2	109 aa		2.26	□□□□□ -2.05
VHR1	YIL056W	GCN3	P14741	305 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	BGL2	P15703	313 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	TRX3	P25372	127 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	OAC1	P32332	324 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	UTP11	P34247	250 aa	Predicted RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	KTI12	P34253	313 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	RIP-Chip
VHR1	YIL056W	IPI1	P38803	334 aa	Predicted RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	ECM14	P38836	430 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	NVJ1	P38881	321 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	RRT13	P40042	185 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	LSM4	P40070	187 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	YMR144W	P40214	342 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	PDS1	P40316	373 aa	Predicted RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	CCC1	P47818	322 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	SWP1	Q02795	286 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	MAK3	Q03503	176 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	YML018C	Q03730	393 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	CSN9	Q03981	162 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	YLR030W	Q07967	263 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	RRP40	Q08285	240 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	SNT2	P53127	1403 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	CDC8	P00572	216 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	CMD1	P06787	147 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	HSP30	P25619	332 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	BUB2	P26448	306 aa	Predicted RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	AEP1	P32493	518 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	CSG2	P35206	410 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	SMP1	P38128	452 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	TRM7	P38238	310 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	YBR062C	P38239	180 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	RCK1	P38622	512 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	CHL4	P38907	458 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	RRG9	P40156	214 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	COQ5	P49017	307 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	UBC12	P52491	188 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	YNL184C	P53876	108 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	HSK3	P69852	69 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	PKR1	Q03880	122 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	DTD1	Q07648	150 aa	Known RBP	2.25	□□□□□ -2.05
VHR1	YIL056W	YOR376W	Q08900	122 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	PEX11	Q12462	236 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	YPL229W	Q99395	206 aa		2.25	□□□□□ -2.05
VHR1	YIL056W	TOP2	P06786	1428 aa	Known RBP	2.24	□□□□□ -2.05
VHR1	YIL056W	MRPL20	P22354	195 aa	Predicted RBP	2.24	□□□□□ -2.05
VHR1	YIL056W	ATG15	P25641	520 aa		2.24	□□□□□ -2.05
VHR1	YIL056W	PRS3	P38689	320 aa	Known RBP	2.24	□□□□□ -2.05
VHR1	YIL056W	RMD6	P39975	231 aa		2.24	□□□□□ -2.05
VHR1	YIL056W	MRX8	Q05473	314 aa		2.24	□□□□□ -2.05
VHR1	YIL056W	YOR289W	Q12012	251 aa	Predicted RBP	2.24	□□□□□ -2.05
VHR1	YIL056W	TIR4	Q12218	487 aa	Predicted RBP	2.24	□□□□□ -2.05
VHR1	YIL056W	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.24	□□□□□ -2.05
VHR1	YIL056W	FLO11	P08640	1367 aa		2.24	□□□□□ -2.05
VHR1	YIL056W	DRS2	P39524	1355 aa		2.24	□□□□□ -2.05
VHR1	YIL056W	SEC4	P07560	215 aa	Known RBP	2.23	□□□□□ -2.05
VHR1	YIL056W	RPL4A	P10664	362 aa	Known RBP	2.23	□□□□□ -2.05
VHR1	YIL056W	FCY2	P17064	533 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	FMT1	P32785	401 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	RPS1A	P33442	255 aa	Known RBP	2.23	□□□□□ -2.05
VHR1	YIL056W	APS1	P35181	156 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	GPX1	P36014	167 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	GLE2	P40066	365 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	RBL2	P48606	106 aa	Known RBP	2.23	□□□□□ -2.05
VHR1	YIL056W	RPL4B	P49626	362 aa	Known RBP	2.23	□□□□□ -2.05
VHR1	YIL056W	PRM8	P53174	237 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	PET191	Q02772	108 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	SDC1	Q03323	175 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	FAR10	Q06001	478 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	YLR046C	Q12253	270 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	TRM10	Q12400	293 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	ERD2	P18414	219 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	MRPS28	P21771	286 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	SCO1	P23833	295 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	SUA7	P29055	345 aa	Predicted RBP	2.23	□□□□□ -2.05
VHR1	YIL056W	SHE1	P38200	338 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	EFM1	P38732	585 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	SPL2	P38839	148 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	GGC1	P38988	300 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	PEX17	P40155	199 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	AIM25	P47140	327 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	TPC1	P53257	314 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	YNL046W	P53956	172 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	YMD8	Q03697	442 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	YDR249C	Q03787	373 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	NEJ1	Q06148	342 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	FRQ1	Q06389	190 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	YOL029C	Q08187	201 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	YPL257W	Q08974	193 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	PRM7	Q12459	698 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	MHT1	Q12525	324 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	RIB3	Q99258	208 aa		2.23	□□□□□ -2.05
VHR1	YIL056W	KIN28	P06242	306 aa		2.22	□□□□□ -2.05
VHR1	YIL056W	YCR090C	P25654	182 aa	Known RBP	2.22	□□□□□ -2.05
VHR1	YIL056W	SFK1	P35735	353 aa		2.22	□□□□□ -2.05
VHR1	YIL056W	MRPL39	P36533	70 aa		2.22	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 104.9 ms