RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W MCM1P11746 286 aa6.59□□□□□ -1.36
PEX28YHR150W MIR1P23641 311 aaKnown RBP6.59□□□□□ -1.36
PEX28YHR150W SCO1P23833 295 aa6.59□□□□□ -1.36
PEX28YHR150W AFG1P32317 509 aa6.59□□□□□ -1.36
PEX28YHR150W RTG1P32607 177 aa6.59□□□□□ -1.36
PEX28YHR150W YKR073CP36153 106 aa6.59□□□□□ -1.36
PEX28YHR150W SHG1P38337 142 aa6.59□□□□□ -1.36
PEX28YHR150W REE1P40893 198 aa6.59□□□□□ -1.36
PEX28YHR150W BLM10P43583 2143 aa6.59□□□□□ -1.36
PEX28YHR150W HSV2P50079 448 aaPredicted RBP6.59□□□□□ -1.36
PEX28YHR150W SRP1Q02821 542 aaKnown RBP6.59□□□□□ -1.36
PEX28YHR150W HAS1Q03532 505 aaKnown RBP6.59□□□□□ -1.36
PEX28YHR150W YPD1Q07688 167 aa6.59□□□□□ -1.36
PEX28YHR150W GAL1P04385 528 aa6.58□□□□□ -1.36
PEX28YHR150W YFR010W-AP0C5N0 62 aa6.58□□□□□ -1.36
PEX28YHR150W RPB3P16370 318 aaKnown RBP6.58□□□□□ -1.36
PEX28YHR150W YPL039WQ03080 316 aa6.58□□□□□ -1.36
PEX28YHR150W CRR1Q05790 422 aa6.58□□□□□ -1.36
PEX28YHR150W ISA2Q12425 185 aa6.58□□□□□ -1.36
PEX28YHR150W MES1P00958 751 aaKnown RBP6.57□□□□□ -1.36
PEX28YHR150W FRS1P15624 595 aaKnown RBP6.57□□□□□ -1.36
PEX28YHR150W SPC25P40014 221 aa6.57□□□□□ -1.36
PEX28YHR150W RPL13BP40212 199 aaKnown RBP6.57□□□□□ -1.36
PEX28YHR150W YJL016WP47072 561 aa6.57□□□□□ -1.36
PEX28YHR150W DAN1P47178 298 aa6.57□□□□□ -1.36
PEX28YHR150W AVT4P50944 713 aa6.57□□□□□ -1.36
PEX28YHR150W BSC5P53755 489 aa6.57□□□□□ -1.36
PEX28YHR150W ATG21Q02887 496 aa6.57□□□□□ -1.36
PEX28YHR150W MRPS17Q03246 237 aaPredicted RBP6.57□□□□□ -1.36
PEX28YHR150W MDM30Q05930 598 aa6.57□□□□□ -1.36
PEX28YHR150W MED4Q12343 284 aa6.57□□□□□ -1.36
PEX28YHR150W RPL13AQ12690 199 aaPredicted RBP6.57□□□□□ -1.36
PEX28YHR150W YHR214C-EQ8TGK0 99 aa6.57□□□□□ -1.36
PEX28YHR150W GDH1P07262 454 aaKnown RBP6.56□□□□□ -1.36
PEX28YHR150W PDX1P16451 410 aa6.56□□□□□ -1.36
PEX28YHR150W YBR197CP38306 217 aa6.56□□□□□ -1.36
PEX28YHR150W GPP1P41277 250 aaKnown RBP6.56□□□□□ -1.36
PEX28YHR150W GNA1P43577 159 aaPredicted RBP6.56□□□□□ -1.36
PEX28YHR150W CTK2P46962 323 aa6.56□□□□□ -1.36
PEX28YHR150W PGU1P47180 361 aa6.56□□□□□ -1.36
PEX28YHR150W OCA1P50946 238 aaPredicted RBP6.56□□□□□ -1.36
PEX28YHR150W SKP1P52286 194 aa6.56□□□□□ -1.36
PEX28YHR150W TIM21P53220 239 aa6.56□□□□□ -1.36
PEX28YHR150W TMA23Q03525 211 aa6.56□□□□□ -1.36
PEX28YHR150W YOR015WQ12169 119 aa6.56□□□□□ -1.36
PEX28YHR150W COX5BP00425 151 aa6.56□□□□□ -1.36
PEX28YHR150W CDC36P06100 191 aaPredicted RBP6.56□□□□□ -1.36
PEX28YHR150W SPO7P18410 259 aa6.56□□□□□ -1.36
PEX28YHR150W CDS1P38221 457 aa6.56□□□□□ -1.36
PEX28YHR150W FAT1P38225 669 aa6.56□□□□□ -1.36
PEX28YHR150W YEA4P40004 342 aa6.56□□□□□ -1.36
PEX28YHR150W IRC24P40580 263 aa6.56□□□□□ -1.36
PEX28YHR150W YIF1P53845 314 aaKnown RBP6.56□□□□□ -1.36
PEX28YHR150W TEX1P53851 422 aaKnown RBP6.56□□□□□ -1.36
PEX28YHR150W SDC1Q03323 175 aa6.56□□□□□ -1.36
PEX28YHR150W GMC1Q04399 608 aa6.56□□□□□ -1.36
PEX28YHR150W DFG5Q05031 458 aa6.56□□□□□ -1.36
PEX28YHR150W RAD28Q12021 506 aa6.56□□□□□ -1.36
PEX28YHR150W CDC39P25655 2108 aaKnown RBP6.55□□□□□ -1.36
PEX28YHR150W ADH3P07246 375 aaKnown RBP6.55□□□□□ -1.36
PEX28YHR150W MET3P08536 511 aa6.55□□□□□ -1.36
PEX28YHR150W ERG8P24521 451 aa6.55□□□□□ -1.36
PEX28YHR150W POF1P25576 258 aa6.55□□□□□ -1.36
PEX28YHR150W MNS1P32906 549 aa6.55□□□□□ -1.36
PEX28YHR150W NTF2P33331 125 aaKnown RBP6.55□□□□□ -1.36
PEX28YHR150W SDH4P37298 181 aa6.55□□□□□ -1.36
PEX28YHR150W UME6P39001 836 aa6.55□□□□□ -1.36
PEX28YHR150W YND1P40009 630 aa6.55□□□□□ -1.36
PEX28YHR150W MOB2P43563 287 aa6.55□□□□□ -1.36
PEX28YHR150W IKS1P47042 667 aa6.55□□□□□ -1.36
PEX28YHR150W LSM8P47093 109 aaKnown RBP6.55□□□□□ -1.36
PEX28YHR150W YDR415CQ04033 374 aaPredicted RBP6.55□□□□□ -1.36
PEX28YHR150W YDL086WQ07505 273 aa6.55□□□□□ -1.36
PEX28YHR150W AIR2Q12476 344 aaKnown RBP6.55□□□□□ -1.36
PEX28YHR150W HUT1Q12520 339 aa6.55□□□□□ -1.36
PEX28YHR150W SEC16P48415 2195 aaKnown RBP6.55□□□□□ -1.36
PEX28YHR150W NUD1P32336 851 aa6.54□□□□□ -1.36
PEX28YHR150W REC114P32841 428 aa6.54□□□□□ -1.36
PEX28YHR150W MRPL4P36517 319 aa6.54□□□□□ -1.36
PEX28YHR150W RMD6P39975 231 aa6.54□□□□□ -1.36
PEX28YHR150W YER158CP40095 573 aa6.54□□□□□ -1.36
PEX28YHR150W MID1P41821 548 aa6.54□□□□□ -1.36
PEX28YHR150W MRX9Q07349 420 aaKnown RBP6.54□□□□□ -1.36
PEX28YHR150W NIP7Q08962 181 aaKnown RBP6.54□□□□□ -1.36
PEX28YHR150W YOR032W-AQ8TGS1 66 aa6.54□□□□□ -1.36
PEX28YHR150W CKA1P15790 372 aa6.53□□□□□ -1.36
PEX28YHR150W STE4P18851 423 aa6.53□□□□□ -1.36
PEX28YHR150W GLC7P32598 312 aaKnown RBP6.53□□□□□ -1.36
PEX28YHR150W CLB6P32943 380 aa6.53□□□□□ -1.36
PEX28YHR150W YNK1P36010 153 aaKnown RBP6.53□□□□□ -1.36
PEX28YHR150W SWD2P36104 329 aaPredicted RBP6.53□□□□□ -1.36
PEX28YHR150W ATP3P38077 311 aaKnown RBP6.53□□□□□ -1.36
PEX28YHR150W FLO5P38894 1075 aa6.53□□□□□ -1.36
PEX28YHR150W PHB1P40961 287 aa6.53□□□□□ -1.36
PEX28YHR150W HXT14P42833 540 aa6.53□□□□□ -1.36
PEX28YHR150W ECO1P43605 281 aa6.53□□□□□ -1.36
PEX28YHR150W GWT1P47026 490 aa6.53□□□□□ -1.36
PEX28YHR150W YJR012CP47087 207 aa6.53□□□□□ -1.36
PEX28YHR150W NSA1P53136 463 aaPredicted RBP6.53□□□□□ -1.36
PEX28YHR150W PBP1P53297 722 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 105 ms