RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W SRY1P36007 326 aa1.84□□□□□ -2.12
CBF2YGR140W ARN2P38724 620 aa1.84□□□□□ -2.12
CBF2YGR140W HMF1P40037 129 aaKnown RBP1.84□□□□□ -2.12
CBF2YGR140W TIF34P40217 347 aaKnown RBP1.84□□□□□ -2.12
CBF2YGR140W YGL204CP53089 101 aa1.84□□□□□ -2.12
CBF2YGR140W RSM27P53305 110 aa1.84□□□□□ -2.12
CBF2YGR140W LSM7P53905 115 aaKnown RBP1.84□□□□□ -2.12
CBF2YGR140W VHS1Q03785 461 aa1.84□□□□□ -2.12
CBF2YGR140W YOR376WQ08900 122 aa1.84□□□□□ -2.12
CBF2YGR140W YPR011CQ12251 326 aa1.84□□□□□ -2.12
CBF2YGR140W ATG22P25568 528 aa1.83□□□□□ -2.12
CBF2YGR140W TIP20P33891 701 aa1.83□□□□□ -2.12
CBF2YGR140W SKG1P36169 355 aa1.83□□□□□ -2.12
CBF2YGR140W TRR2P38816 342 aa1.83□□□□□ -2.12
CBF2YGR140W ASP1P38986 381 aaPredicted RBP1.83□□□□□ -2.12
CBF2YGR140W YAR068WP39564 161 aa1.83□□□□□ -2.12
CBF2YGR140W LSM4P40070 187 aaKnown RBP1.83□□□□□ -2.12
CBF2YGR140W REE1P40893 198 aa1.83□□□□□ -2.12
CBF2YGR140W COS6P53344 381 aa1.83□□□□□ -2.12
CBF2YGR140W RMI1Q02685 241 aa1.83□□□□□ -2.12
CBF2YGR140W YMR244WQ04018 355 aa1.83□□□□□ -2.12
CBF2YGR140W YPR014CQ6B0W2 109 aa1.83□□□□□ -2.12
CBF2YGR140W ERD2P18414 219 aa1.83□□□□□ -2.12
CBF2YGR140W MAG1P22134 296 aaKnown RBP1.83□□□□□ -2.12
CBF2YGR140W DOG2P38773 246 aa1.83□□□□□ -2.12
CBF2YGR140W DOG1P38774 246 aa1.83□□□□□ -2.12
CBF2YGR140W YJL028WP47062 111 aa1.83□□□□□ -2.12
CBF2YGR140W AIM34Q03673 198 aa1.83□□□□□ -2.12
CBF2YGR140W ARO80Q04052 950 aa1.83□□□□□ -2.12
CBF2YGR140W YMR315WQ04869 349 aaKnown RBP1.83□□□□□ -2.12
CBF2YGR140W YMR317WQ04893 1140 aa1.83□□□□□ -2.12
CBF2YGR140W DYN3Q04949 312 aa1.83□□□□□ -2.12
CBF2YGR140W PAL1Q05518 499 aaKnown RBP1.83□□□□□ -2.12
CBF2YGR140W FDH1Q08911 376 aa1.83□□□□□ -2.12
CBF2YGR140W YPL257WQ08974 193 aa1.83□□□□□ -2.12
CBF2YGR140W YHR214C-EQ8TGK0 99 aa1.83□□□□□ -2.12
CBF2YGR140W FLO11P08640 1367 aa1.83□□□□□ -2.12
CBF2YGR140W ADH3P07246 375 aaKnown RBP1.82□□□□□ -2.12
CBF2YGR140W PET54P10834 293 aa1.82□□□□□ -2.12
CBF2YGR140W RRT13P40042 185 aa1.82□□□□□ -2.12
CBF2YGR140W GLE2P40066 365 aa1.82□□□□□ -2.12
CBF2YGR140W ICE2P40499 491 aa1.82□□□□□ -2.12
CBF2YGR140W FLC3P53121 802 aa1.82□□□□□ -2.12
CBF2YGR140W YPR127WQ06494 345 aa1.82□□□□□ -2.12
CBF2YGR140W LOA1Q06508 300 aa1.82□□□□□ -2.12
CBF2YGR140W YOR020W-AQ3E824 90 aa1.82□□□□□ -2.12
CBF2YGR140W PAN1P32521 1480 aa1.82□□□□□ -2.12
CBF2YGR140W YPR170W-BP0C5R9 85 aa1.82□□□□□ -2.12
CBF2YGR140W RNP1P32385 249 aa1.82□□□□□ -2.12
CBF2YGR140W NUF2P33895 451 aa1.82□□□□□ -2.12
CBF2YGR140W TEM1P38987 245 aa1.82□□□□□ -2.12
CBF2YGR140W EDC3P39998 551 aaKnown RBP1.82□□□□□ -2.12
CBF2YGR140W YER189WP40104 122 aa1.82□□□□□ -2.12
CBF2YGR140W SYF2P53277 215 aaPredicted RBP1.82□□□□□ -2.12
CBF2YGR140W YNL184CP53876 108 aa1.82□□□□□ -2.12
CBF2YGR140W TMA20P89886 181 aaPredicted RBP1.82□□□□□ -2.12
CBF2YGR140W ECM11Q04110 302 aa1.82□□□□□ -2.12
CBF2YGR140W HNT1Q04344 158 aaKnown RBP1.82□□□□□ -2.12
CBF2YGR140W BBP1Q12365 385 aa1.82□□□□□ -2.12
CBF2YGR140W YAL063C-AQ3E791 96 aa1.82□□□□□ -2.12
CBF2YGR140W YBR298C-AQ8TGK4 73 aa1.82□□□□□ -2.12
CBF2YGR140W FCY2P17064 533 aa1.81□□□□□ -2.12
CBF2YGR140W ERG24P32462 438 aaKnown RBP1.81□□□□□ -2.12
CBF2YGR140W VMA22P38784 181 aa1.81□□□□□ -2.12
CBF2YGR140W NVJ1P38881 321 aa1.81□□□□□ -2.12
CBF2YGR140W AIM2P39721 246 aa1.81□□□□□ -2.12
CBF2YGR140W FMP32P43557 207 aa1.81□□□□□ -2.12
CBF2YGR140W NQM1P53228 333 aaPredicted RBP1.81□□□□□ -2.12
CBF2YGR140W HPT1Q04178 221 aaKnown RBP1.81□□□□□ -2.12
CBF2YGR140W SHH4Q06236 168 aa1.81□□□□□ -2.12
CBF2YGR140W YOL160WQ08321 113 aa1.81□□□□□ -2.12
CBF2YGR140W MSA1Q08471 629 aa1.81□□□□□ -2.12
CBF2YGR140W MHT1Q12525 324 aa1.81□□□□□ -2.12
CBF2YGR140W ISD11Q6Q560 94 aa1.81□□□□□ -2.12
CBF2YGR140W MDS3P53094 1487 aa1.81□□□□□ -2.12
CBF2YGR140W SFC1P33303 322 aa1.81□□□□□ -2.12
CBF2YGR140W CSG2P35206 410 aa1.81□□□□□ -2.12
CBF2YGR140W MRPL49P40858 161 aaPredicted RBP1.81□□□□□ -2.12
CBF2YGR140W YGL260WP53056 76 aa1.81□□□□□ -2.12
CBF2YGR140W MDM34P53083 459 aa1.81□□□□□ -2.12
CBF2YGR140W DFM1Q12743 341 aaKnown RBP1.81□□□□□ -2.12
CBF2YGR140W SEC4P07560 215 aaKnown RBP1.8□□□□□ -2.12
CBF2YGR140W IDP1P21954 428 aaKnown RBP1.8□□□□□ -2.12
CBF2YGR140W AVT2P39981 480 aa1.8□□□□□ -2.12
CBF2YGR140W FIS1P40515 155 aa1.8□□□□□ -2.12
CBF2YGR140W YPL039WQ03080 316 aa1.8□□□□□ -2.12
CBF2YGR140W RAV2Q03956 351 aa1.8□□□□□ -2.12
CBF2YGR140W TDA8Q6B2U8 126 aa1.8□□□□□ -2.12
CBF2YGR140W MBF1O14467 151 aaKnown RBP1.8□□□□□ -2.12
CBF2YGR140W COX4P04037 155 aa1.8□□□□□ -2.12
CBF2YGR140W PBI2P0CT04 75 aaKnown RBP1.8□□□□□ -2.12
CBF2YGR140W DSF1P0CX08 502 aa1.8□□□□□ -2.12
CBF2YGR140W YNR073CP0CX09 502 aa1.8□□□□□ -2.12
CBF2YGR140W MDH3P32419 343 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
CBF2YGR140W CLG1P35190 452 aa1.8□□□□□ -2.12
CBF2YGR140W YBR063CP38083 404 aa1.8□□□□□ -2.12
CBF2YGR140W RRG9P40156 214 aa1.8□□□□□ -2.12
CBF2YGR140W SYS1P41544 203 aa1.8□□□□□ -2.12
CBF2YGR140W COG5P53951 403 aa1.8□□□□□ -2.12
CBF2YGR140W YDC1Q02896 317 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms