RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W YHL049CP38722 271 aa5.41□□□□□ -1.54
SNU71YGR013W AVT7P40501 490 aa5.41□□□□□ -1.54
SNU71YGR013W MCM22P47167 239 aa5.41□□□□□ -1.54
SNU71YGR013W BRR6P53062 197 aa5.41□□□□□ -1.54
SNU71YGR013W TOS8P53147 276 aa5.41□□□□□ -1.54
SNU71YGR013W SPG4Q04438 115 aa5.41□□□□□ -1.54
SNU71YGR013W UIP4Q08926 304 aa5.41□□□□□ -1.54
SNU71YGR013W NAG1Q8TGN9 163 aa5.41□□□□□ -1.54
SNU71YGR013W YKR104WP0CE69 306 aa5.4□□□□□ -1.55
SNU71YGR013W COG3P40094 801 aa5.4□□□□□ -1.55
SNU71YGR013W MMS2P53152 137 aa5.4□□□□□ -1.55
SNU71YGR013W SCW4P53334 386 aaKnown RBP5.4□□□□□ -1.55
SNU71YGR013W YNL140CP53910 189 aa5.4□□□□□ -1.55
SNU71YGR013W SNO1Q03144 224 aa5.4□□□□□ -1.55
SNU71YGR013W OCA6Q12454 224 aa5.4□□□□□ -1.55
SNU71YGR013W YNL162W-AQ3E7A8 72 aa5.4□□□□□ -1.55
SNU71YGR013W YPR117WQ06116 2489 aa5.4□□□□□ -1.55
SNU71YGR013W DPB2P24482 689 aaPredicted RBP5.39□□□□□ -1.55
SNU71YGR013W FRM2P37261 193 aa5.39□□□□□ -1.55
SNU71YGR013W LSM1P47017 172 aaKnown RBP5.39□□□□□ -1.55
SNU71YGR013W YGL039WP53183 348 aaKnown RBP5.39□□□□□ -1.55
SNU71YGR013W COG7P53195 279 aa5.39□□□□□ -1.55
SNU71YGR013W YLR177WQ06251 628 aa5.39□□□□□ -1.55
SNU71YGR013W YOR376WQ08900 122 aa5.39□□□□□ -1.55
SNU71YGR013W YCL021W-AQ96VH3 125 aa5.39□□□□□ -1.55
SNU71YGR013W DDP1Q99321 188 aaKnown RBP5.39□□□□□ -1.55
SNU71YGR013W SRY1P36007 326 aa5.39□□□□□ -1.55
SNU71YGR013W MDM31P38880 579 aa5.39□□□□□ -1.55
SNU71YGR013W SEN34P39707 275 aa5.39□□□□□ -1.55
SNU71YGR013W HPM1P40481 377 aa5.39□□□□□ -1.55
SNU71YGR013W FAR7P43592 221 aa5.39□□□□□ -1.55
SNU71YGR013W TMA22P47089 198 aaPredicted RBP5.39□□□□□ -1.55
SNU71YGR013W CPR7P47103 393 aa5.39□□□□□ -1.55
SNU71YGR013W YGR015CP53208 328 aa5.39□□□□□ -1.55
SNU71YGR013W YET3Q07451 203 aa5.39□□□□□ -1.55
SNU71YGR013W YNG1Q08465 219 aa5.39□□□□□ -1.55
SNU71YGR013W YER078W-AQ3E7A2 54 aa5.39□□□□□ -1.55
SNU71YGR013W SDH3P33421 198 aa5.38□□□□□ -1.55
SNU71YGR013W UFE1P41834 346 aa5.38□□□□□ -1.55
SNU71YGR013W BIR1P47134 954 aa5.38□□□□□ -1.55
SNU71YGR013W SYF2P53277 215 aaPredicted RBP5.38□□□□□ -1.55
SNU71YGR013W FMP41P53889 259 aaKnown RBP5.38□□□□□ -1.55
SNU71YGR013W WTM1Q12363 437 aaKnown RBP5.38□□□□□ -1.55
SNU71YGR013W MYO1P08964 1928 aa5.38□□□□□ -1.55
SNU71YGR013W YMR316C-AI2HB70 103 aa5.37□□□□□ -1.55
SNU71YGR013W CBP6P07253 162 aaPredicted RBP5.37□□□□□ -1.55
SNU71YGR013W PUT1P09368 476 aa5.37□□□□□ -1.55
SNU71YGR013W YCR101CP25607 182 aa5.37□□□□□ -1.55
SNU71YGR013W RCN1P36054 211 aa5.37□□□□□ -1.55
SNU71YGR013W PDR17P53844 350 aa5.37□□□□□ -1.55
SNU71YGR013W YPR147CQ06522 304 aaKnown RBP5.37□□□□□ -1.55
SNU71YGR013W YPL278CQ08990 100 aa5.37□□□□□ -1.55
SNU71YGR013W IZH2Q12442 317 aa5.37□□□□□ -1.55
SNU71YGR013W MRX4Q12467 430 aa5.37□□□□□ -1.55
SNU71YGR013W YOL163WP0CF20 169 aa5.37□□□□□ -1.55
SNU71YGR013W ASP3-2P0CX77 362 aa5.37□□□□□ -1.55
SNU71YGR013W ASP3-3P0CX78 362 aa5.37□□□□□ -1.55
SNU71YGR013W ASP3-4P0CX79 362 aa5.37□□□□□ -1.55
SNU71YGR013W ASP3-1P0CZ17 362 aa5.37□□□□□ -1.55
SNU71YGR013W SHE1P38200 338 aa5.37□□□□□ -1.55
SNU71YGR013W SHG1P38337 142 aa5.37□□□□□ -1.55
SNU71YGR013W GIM4P40005 111 aaKnown RBP5.37□□□□□ -1.55
SNU71YGR013W YLR460CP54007 376 aa5.37□□□□□ -1.55
SNU71YGR013W JID1Q12350 301 aa5.37□□□□□ -1.55
SNU71YGR013W YCL001W-BQ96VH2 84 aa5.37□□□□□ -1.55
SNU71YGR013W YPL229WQ99395 206 aa5.37□□□□□ -1.55
SNU71YGR013W QCR2P07257 368 aa5.36□□□□□ -1.55
SNU71YGR013W CDC50P25656 391 aa5.36□□□□□ -1.55
SNU71YGR013W CAM1P29547 415 aaKnown RBP5.36□□□□□ -1.55
SNU71YGR013W YPL113CQ02961 396 aa5.36□□□□□ -1.55
SNU71YGR013W SUE1Q06524 206 aa5.36□□□□□ -1.55
SNU71YGR013W SRL1Q08673 210 aa5.36□□□□□ -1.55
SNU71YGR013W MET2P08465 486 aa5.35□□□□□ -1.55
SNU71YGR013W YGL041W-AP0C5N3 154 aa5.35□□□□□ -1.55
SNU71YGR013W USB1Q12208 290 aaKnown RBP5.35□□□□□ -1.55
SNU71YGR013W COX5AP00424 153 aa5.34□□□□□ -1.55
SNU71YGR013W GCY1P14065 312 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
SNU71YGR013W TRR1P29509 319 aaKnown RBP5.34□□□□□ -1.55
SNU71YGR013W DRE2P36152 348 aa5.34□□□□□ -1.55
SNU71YGR013W AIM2P39721 246 aa5.34□□□□□ -1.55
SNU71YGR013W YMR144WP40214 342 aaKnown RBP5.34□□□□□ -1.55
SNU71YGR013W GAB1P41733 394 aa5.34□□□□□ -1.55
SNU71YGR013W YML096WQ04489 525 aa5.34□□□□□ -1.55
SNU71YGR013W RRP40Q08285 240 aaKnown RBP5.34□□□□□ -1.55
SNU71YGR013W AKR2Q12013 749 aa5.34□□□□□ -1.55
SNU71YGR013W CMD1P06787 147 aaKnown RBP5.34□□□□□ -1.55
SNU71YGR013W FIG1P38224 298 aa5.34□□□□□ -1.55
SNU71YGR013W LSM8P47093 109 aaKnown RBP5.34□□□□□ -1.55
SNU71YGR013W CDC28P00546 298 aaKnown RBP5.33□□□□□ -1.56
SNU71YGR013W CPT1P17898 393 aa5.33□□□□□ -1.56
SNU71YGR013W AST2P39945 430 aaKnown RBP5.33□□□□□ -1.56
SNU71YGR013W YJL016WP47072 561 aa5.33□□□□□ -1.56
SNU71YGR013W GTR2P53290 341 aa5.33□□□□□ -1.56
SNU71YGR013W RCF2P53721 224 aa5.33□□□□□ -1.56
SNU71YGR013W NRK1P53915 240 aa5.33□□□□□ -1.56
SNU71YGR013W YDR018CQ12185 396 aa5.33□□□□□ -1.56
SNU71YGR013W ERV2Q12284 196 aa5.33□□□□□ -1.56
SNU71YGR013W ZWF1P11412 505 aaKnown RBP5.32□□□□□ -1.56
SNU71YGR013W BGL2P15703 313 aaKnown RBP5.32□□□□□ -1.56
SNU71YGR013W MRPL28P36527 147 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 107.2 ms