RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C GAA1P39012 614 aa4.34□□□□□ -1.71
SEC9YGR009C YEA4P40004 342 aa4.34□□□□□ -1.71
SEC9YGR009C XBP1P40489 647 aa4.34□□□□□ -1.71
SEC9YGR009C YPS6P40583 537 aa4.34□□□□□ -1.71
SEC9YGR009C MUP1P50276 574 aa4.34□□□□□ -1.71
SEC9YGR009C GRH1Q04410 372 aaKnown RBP4.34□□□□□ -1.71
SEC9YGR009C HPF1Q05164 967 aa4.34□□□□□ -1.71
SEC9YGR009C ERP1Q05359 219 aaKnown RBP4.34□□□□□ -1.71
SEC9YGR009C ERP3Q12403 225 aa4.34□□□□□ -1.71
SEC9YGR009C LAS17Q12446 633 aa4.34□□□□□ -1.71
SEC9YGR009C ISD11Q6Q560 94 aa4.34□□□□□ -1.71
SEC9YGR009C MYO2P19524 1574 aaKnown RBP4.34□□□□□ -1.72
SEC9YGR009C TY1A-DR4O74302 440 aa4.33□□□□□ -1.72
SEC9YGR009C RAS1P01119 309 aa4.33□□□□□ -1.72
SEC9YGR009C RAD52P06778 471 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C PEP4P07267 405 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C TY1A-LR4P0C2I8 440 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C TY1A-AP0CX57 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-PR1P0CX58 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-ORP0CX59 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-PR2P0CX60 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-DR5P0CX65 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-ER2P0CX66 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-GR3P0CX67 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-LR1P0CX68 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-MR2P0CX69 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-DR6P0CX70 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-ER1P0CX71 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-LR2P0CX72 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-PLP0CX73 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-JR1P0CX74 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-LR3P0CX75 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-ML2P0CX76 440 aa4.33□□□□□ -1.72
SEC9YGR009C TRX3P25372 127 aa4.33□□□□□ -1.72
SEC9YGR009C PEX34P25584 144 aa4.33□□□□□ -1.72
SEC9YGR009C YCR100CP25606 316 aa4.33□□□□□ -1.72
SEC9YGR009C NAB2P32505 525 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
SEC9YGR009C EMP24P32803 203 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C YBR144CP34215 104 aa4.33□□□□□ -1.72
SEC9YGR009C SHB17P36136 271 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C PEX22P39718 180 aa4.33□□□□□ -1.72
SEC9YGR009C MOB2P43563 287 aa4.33□□□□□ -1.72
SEC9YGR009C LCB3P47013 409 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-JR2P47099 440 aa4.33□□□□□ -1.72
SEC9YGR009C YGL230CP53074 147 aa4.33□□□□□ -1.72
SEC9YGR009C YNL095CP53932 642 aa4.33□□□□□ -1.72
SEC9YGR009C CDC14Q00684 551 aa4.33□□□□□ -1.72
SEC9YGR009C YMR178WQ03219 274 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C TY1A-DR1Q03856 440 aa4.33□□□□□ -1.72
SEC9YGR009C YDR415CQ04033 374 aaPredicted RBP4.33□□□□□ -1.72
SEC9YGR009C TY1A-ML1Q04706 440 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C GPI11Q06636 219 aa4.33□□□□□ -1.72
SEC9YGR009C THP1Q08231 455 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-GR1Q12085 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-DR3Q12441 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-NL2Q12470 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-GR2Q12485 440 aa4.33□□□□□ -1.72
SEC9YGR009C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C TY1A-OLQ92392 440 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C YLR415CO13578 112 aa4.33□□□□□ -1.72
SEC9YGR009C RIP1P08067 215 aa4.33□□□□□ -1.72
SEC9YGR009C RPL12AP0CX53 165 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C RPL12BP0CX54 165 aa4.33□□□□□ -1.72
SEC9YGR009C SAM35P14693 329 aa4.33□□□□□ -1.72
SEC9YGR009C MOH1P38191 138 aa4.33□□□□□ -1.72
SEC9YGR009C YBR053CP38235 358 aa4.33□□□□□ -1.72
SEC9YGR009C TRS20P38334 175 aa4.33□□□□□ -1.72
SEC9YGR009C RRP4P38792 359 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C MIT1P40002 666 aa4.33□□□□□ -1.72
SEC9YGR009C SPC25P40014 221 aa4.33□□□□□ -1.72
SEC9YGR009C RPL13BP40212 199 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C DLS1P40366 167 aa4.33□□□□□ -1.72
SEC9YGR009C YIL152WP40455 235 aa4.33□□□□□ -1.72
SEC9YGR009C AIR1P40507 360 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C SYF2P53277 215 aaPredicted RBP4.33□□□□□ -1.72
SEC9YGR009C SAY1P53324 424 aa4.33□□□□□ -1.72
SEC9YGR009C SDC1Q03323 175 aa4.33□□□□□ -1.72
SEC9YGR009C INP1Q03694 420 aa4.33□□□□□ -1.72
SEC9YGR009C YML018CQ03730 393 aa4.33□□□□□ -1.72
SEC9YGR009C YMR166CQ03829 368 aa4.33□□□□□ -1.72
SEC9YGR009C UTP15Q04305 513 aaKnown RBP4.33□□□□□ -1.72
SEC9YGR009C TAZ1Q06510 381 aa4.33□□□□□ -1.72
SEC9YGR009C AI5_ALPHAQ9ZZX1 630 aa4.33□□□□□ -1.72
SEC9YGR009C MRS1P07266 363 aa4.32□□□□□ -1.72
SEC9YGR009C STE4P18851 423 aa4.32□□□□□ -1.72
SEC9YGR009C SLM5P25345 492 aaKnown RBP4.32□□□□□ -1.72
SEC9YGR009C MXR2P25566 168 aa4.32□□□□□ -1.72
SEC9YGR009C MRPS5P33759 307 aa4.32□□□□□ -1.72
SEC9YGR009C SWD2P36104 329 aaPredicted RBP4.32□□□□□ -1.72
SEC9YGR009C FAA2P39518 744 aa4.32□□□□□ -1.72
SEC9YGR009C YEL075CP39972 122 aa4.32□□□□□ -1.72
SEC9YGR009C YER079WP40052 210 aaKnown RBP4.32□□□□□ -1.72
SEC9YGR009C SNM1P40993 198 aa4.32□□□□□ -1.72
SEC9YGR009C POP1P41812 875 aa4.32□□□□□ -1.72
SEC9YGR009C YFL040WP43562 540 aa4.32□□□□□ -1.72
SEC9YGR009C HXT10P43581 546 aa4.32□□□□□ -1.72
SEC9YGR009C OST2P46964 130 aa4.32□□□□□ -1.72
SEC9YGR009C MCM22P47167 239 aa4.32□□□□□ -1.72
SEC9YGR009C APJ1P53940 528 aa4.32□□□□□ -1.72
SEC9YGR009C RCR2Q03446 210 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms