RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	MSS11	Q03825	758 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	UTP15	Q04305	513 aa	Known RBP	4.13	□□□□□ -1.75
TFB3	YDR460W	NAT4	Q04751	285 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	SUE1	Q06524	206 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	AAD4	Q07747	329 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	YPL264C	Q08980	353 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	TGL5	Q12043	749 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	PST1	Q12355	444 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	FRE6	Q12473	712 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	COX19	Q3E731	98 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	HRP1	Q99383	534 aa	Known RBP	4.13	□□□□□ -1.75
TFB3	YDR460W	Q0010	Q9ZZX9	128 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	FKS1	P38631	1876 aa	Known RBP	4.13	□□□□□ -1.75
TFB3	YDR460W	COX2	P00410	251 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	RPS25B	P0C0T4	108 aa	Known RBP	4.12	□□□□□ -1.75
TFB3	YDR460W	MAK32	P23060	363 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	YCR023C	P25351	611 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	ADH7	P25377	361 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	YCR015C	P25616	317 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	MSS51	P32335	436 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	ERG3	P32353	365 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	UTR5	P32630	166 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	DOG2	P38773	246 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	BDH1	P39714	382 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	HMF1	P40037	129 aa	Known RBP	4.12	□□□□□ -1.75
TFB3	YDR460W	NSA2	P40078	261 aa	Known RBP	4.12	□□□□□ -1.75
TFB3	YDR460W	MPM1	P40364	252 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	MSL1	P40567	111 aa	Predicted RBP	4.12	□□□□□ -1.75
TFB3	YDR460W	PHS1	P40857	217 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	SNM1	P40993	198 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	PDR17	P53844	350 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	IGO1	P53897	168 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	YLR460C	P54007	376 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	YDR391C	Q04170	232 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	SEC13	Q04491	297 aa	Known RBP	4.12	□□□□□ -1.75
TFB3	YDR460W	SEN15	Q04675	128 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	SCW10	Q04951	389 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	HRD3	Q05787	833 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	YTH1	Q06102	208 aa	Predicted RBP	4.12	□□□□□ -1.75
TFB3	YDR460W	KEI1	Q06346	221 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	NBP2	Q12163	236 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	FRE8	Q12209	686 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	JLP1	Q12358	412 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	ORT1	Q12375	292 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	RPS25A	Q3E792	108 aa	Predicted RBP	4.12	□□□□□ -1.75
TFB3	YDR460W	UBR1	P19812	1950 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	CCH1	P50077	2039 aa		4.12	□□□□□ -1.75
TFB3	YDR460W	BEM2	P39960	2167 aa	Known RBP	4.12	□□□□□ -1.75
TFB3	YDR460W	TIM9	O74700	87 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	SAM2	P19358	384 aa	Known RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	MEK1	P24719	497 aa	Predicted RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	EMP70	P32802	667 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	SKN1	P33336	771 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	PRP18	P33411	251 aa	Predicted RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	KKQ8	P36004	724 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	MCH2	P36032	473 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	DAD2	P36162	133 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	ASC1	P38011	319 aa	Known RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	LDB7	P38210	180 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	YBR096W	P38256	230 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	YHR033W	P38690	423 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	WSC4	P38739	605 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	YPT35	P38815	214 aa	Known RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	TRR2	P38816	342 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	YHR122W	P38829	231 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	RPB11	P38902	120 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	PUG1	P40100	303 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	YPS6	P40583	537 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	TAX4	P47030	604 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	PET130	P47065	347 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	NIF3	P53081	288 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	BOL2	P53082	120 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	TIM13	P53299	105 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	PAU12	P53343	120 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	OGG1	P53397	376 aa	Predicted RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	YNR064C	P53750	290 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	TEX1	P53851	422 aa	Known RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	PDR16	P53860	351 aa	Known RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	SUR7	P54003	302 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	COQ11	Q05892	277 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	BNA5	Q05979	453 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	BLS1	Q06071	122 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	TEN1	Q07921	160 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	YLR030W	Q07967	263 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	YLR036C	Q07986	203 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	BSC6	Q08280	497 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	ATG41	Q12048	136 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
TFB3	YDR460W	PRS5	Q12265	496 aa	Known RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	GEP5	Q12393	293 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	ERP3	Q12403	225 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	ISA2	Q12425	185 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	RPS21B	Q3E754	87 aa	Known RBP	4.11	□□□□□ -1.75
TFB3	YDR460W	YKL033W-A	Q86ZR7	236 aa		4.11	□□□□□ -1.75
TFB3	YDR460W	TPI1	P00942	248 aa	Known RBP	4.1	□□□□□ -1.75
TFB3	YDR460W	COX9	P07255	59 aa		4.1	□□□□□ -1.75
TFB3	YDR460W	ASP3-2	P0CX77	362 aa		4.1	□□□□□ -1.75
TFB3	YDR460W	ASP3-3	P0CX78	362 aa		4.1	□□□□□ -1.75
TFB3	YDR460W	ASP3-4	P0CX79	362 aa		4.1	□□□□□ -1.75
TFB3	YDR460W	RPL35A	P0CX84	120 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 175.6 ms