RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W RIB4P50861 169 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W RPL9BP51401 191 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W CWC23P52868 283 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W MDM34P53083 459 aa1.17□□□□□ -2.22
CDC36YDL165W RMD9P53140 646 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W JAC1P53193 184 aa1.17□□□□□ -2.22
CDC36YDL165W LST7P53237 242 aa1.17□□□□□ -2.22
CDC36YDL165W NOP19P53317 196 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W MKC7P53379 596 aa1.17□□□□□ -2.22
CDC36YDL165W MPA43P53583 542 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W TRM112P53738 135 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W YNL184CP53876 108 aa1.17□□□□□ -2.22
CDC36YDL165W YNL143CP53908 130 aa1.17□□□□□ -2.22
CDC36YDL165W YLR460CP54007 376 aa1.17□□□□□ -2.22
CDC36YDL165W ACT1P60010 375 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W TPS1Q00764 495 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W OSH6Q02201 448 aa1.17□□□□□ -2.22
CDC36YDL165W ABF2Q02486 183 aa1.17□□□□□ -2.22
CDC36YDL165W YPL067CQ02754 198 aa1.17□□□□□ -2.22
CDC36YDL165W VPS28Q02767 242 aa1.17□□□□□ -2.22
CDC36YDL165W ELC1Q03071 99 aa1.17□□□□□ -2.22
CDC36YDL165W MAK3Q03503 176 aa1.17□□□□□ -2.22
CDC36YDL165W GOT1Q03554 138 aa1.17□□□□□ -2.22
CDC36YDL165W AIM34Q03673 198 aa1.17□□□□□ -2.22
CDC36YDL165W CUE4Q04201 117 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W SHH3Q04487 196 aa1.17□□□□□ -2.22
CDC36YDL165W PRM6Q04705 352 aa1.17□□□□□ -2.22
CDC36YDL165W DPP1Q05521 289 aa1.17□□□□□ -2.22
CDC36YDL165W YHC1Q05900 231 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W SEI1Q06058 285 aa1.17□□□□□ -2.22
CDC36YDL165W YPR078CQ06813 372 aa1.17□□□□□ -2.22
CDC36YDL165W ASR1Q06834 288 aa1.17□□□□□ -2.22
CDC36YDL165W SNX3Q08826 162 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W YLR050CQ12155 161 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W YOR342CQ12182 319 aa1.17□□□□□ -2.22
CDC36YDL165W PRM7Q12459 698 aa1.17□□□□□ -2.22
CDC36YDL165W SFG1Q12507 346 aa1.17□□□□□ -2.22
CDC36YDL165W MHT1Q12525 324 aa1.17□□□□□ -2.22
CDC36YDL165W YGL194C-AQ2V2P6 80 aa1.17□□□□□ -2.22
CDC36YDL165W YJR112W-AQ3E743 109 aa1.17□□□□□ -2.22
CDC36YDL165W YCR075W-AQ3E830 75 aa1.17□□□□□ -2.22
CDC36YDL165W PDR11P40550 1411 aa1.16□□□□□ -2.22
CDC36YDL165W REV3P14284 1504 aa1.16□□□□□ -2.22
CDC36YDL165W STU1P38198 1513 aa1.16□□□□□ -2.22
CDC36YDL165W COX2P00410 251 aa1.16□□□□□ -2.22
CDC36YDL165W SUC2P00724 532 aa1.16□□□□□ -2.22
CDC36YDL165W PAI3P01094 68 aa1.16□□□□□ -2.22
CDC36YDL165W VAR1P02381 398 aa1.16□□□□□ -2.22
CDC36YDL165W ILV5P06168 395 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W SGA1P08019 549 aa1.16□□□□□ -2.22
CDC36YDL165W PBI2P0CT04 75 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W ERD1P16151 362 aa1.16□□□□□ -2.22
CDC36YDL165W RPB5P20434 215 aa1.16□□□□□ -2.22
CDC36YDL165W YSR3P23501 404 aa1.16□□□□□ -2.22
CDC36YDL165W STP22P25604 385 aa1.16□□□□□ -2.22
CDC36YDL165W BUB2P26448 306 aaPredicted RBP1.16□□□□□ -2.22
CDC36YDL165W ERV1P27882 189 aa1.16□□□□□ -2.22
CDC36YDL165W MRP49P32388 137 aa1.16□□□□□ -2.22
CDC36YDL165W YEF1P32622 495 aa1.16□□□□□ -2.22
CDC36YDL165W SFC1P33303 322 aa1.16□□□□□ -2.22
CDC36YDL165W SGE1P33335 543 aa1.16□□□□□ -2.22
CDC36YDL165W FRE2P36033 711 aa1.16□□□□□ -2.22
CDC36YDL165W MRPL28P36527 147 aa1.16□□□□□ -2.22
CDC36YDL165W PRS4P38063 326 aaPredicted RBP1.16□□□□□ -2.22
CDC36YDL165W THI2P38141 450 aa1.16□□□□□ -2.22
CDC36YDL165W GPX2P38143 162 aa1.16□□□□□ -2.22
CDC36YDL165W ATG8P38182 117 aaRIP-Chip data1.16□□□□□ -2.22not detected
CDC36YDL165W POP8P38208 133 aa1.16□□□□□ -2.22
CDC36YDL165W LDB7P38210 180 aa1.16□□□□□ -2.22
CDC36YDL165W YBR013CP38215 129 aa1.16□□□□□ -2.22
CDC36YDL165W YBR032WP38223 100 aa1.16□□□□□ -2.22
CDC36YDL165W RRP4P38792 359 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W YHR130CP38834 111 aa1.16□□□□□ -2.22
CDC36YDL165W YHR210CP38893 341 aa1.16□□□□□ -2.22
CDC36YDL165W HPA3P39979 161 aa1.16□□□□□ -2.22
CDC36YDL165W HEM14P40012 539 aa1.16□□□□□ -2.22
CDC36YDL165W ERG28P40030 148 aa1.16□□□□□ -2.22
CDC36YDL165W YER189WP40104 122 aa1.16□□□□□ -2.22
CDC36YDL165W RPL13BP40212 199 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W TIF34P40217 347 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W PRE6P40303 254 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W AYR1P40471 297 aa1.16□□□□□ -2.22
CDC36YDL165W SYS1P41544 203 aa1.16□□□□□ -2.22
CDC36YDL165W HAC1P41546 238 aa1.16□□□□□ -2.22
CDC36YDL165W POP1P41812 875 aa1.16□□□□□ -2.22
CDC36YDL165W YFL040WP43562 540 aa1.16□□□□□ -2.22
CDC36YDL165W RPA43P46669 326 aa1.16□□□□□ -2.22
CDC36YDL165W XPT1P47165 209 aa1.16□□□□□ -2.22
CDC36YDL165W MCM22P47167 239 aa1.16□□□□□ -2.22
CDC36YDL165W YGL185CP53100 379 aa1.16□□□□□ -2.22
CDC36YDL165W PEX31P53203 462 aa1.16□□□□□ -2.22
CDC36YDL165W THG1P53215 237 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W ASI3P53983 676 aa1.16□□□□□ -2.22
CDC36YDL165W SUR7P54003 302 aa1.16□□□□□ -2.22
CDC36YDL165W RPL22BP56628 122 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W TIM8P57744 87 aa1.16□□□□□ -2.22
CDC36YDL165W HHT1P61830 136 aa1.16□□□□□ -2.22
CDC36YDL165W YPL077CQ02831 240 aa1.16□□□□□ -2.22
CDC36YDL165W GIP3Q03016 1276 aa1.16□□□□□ -2.22
CDC36YDL165W YMR099CQ03161 297 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 121.2 ms