RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W PRE3P38624 215 aa6.16□□□□□ -1.42
NUP84YDL116W ERJ5P43613 295 aaPredicted RBP6.16□□□□□ -1.42
NUP84YDL116W YJR011CP47086 261 aaPredicted RBP6.16□□□□□ -1.42
NUP84YDL116W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
NUP84YDL116W SEI1Q06058 285 aa6.16□□□□□ -1.42
NUP84YDL116W YOR343CQ12484 108 aa6.16□□□□□ -1.42
NUP84YDL116W ADH3P07246 375 aaKnown RBP6.16□□□□□ -1.42
NUP84YDL116W MATALPHA1P0CY06 175 aa6.16□□□□□ -1.42
NUP84YDL116W HMLALPHA1P0CY07 175 aa6.16□□□□□ -1.42
NUP84YDL116W FAA1P30624 700 aaKnown RBP6.16□□□□□ -1.42
NUP84YDL116W CLB6P32943 380 aa6.16□□□□□ -1.42
NUP84YDL116W RPS27AP35997 82 aaKnown RBP6.16□□□□□ -1.42
NUP84YDL116W RPS27BP38711 82 aa6.16□□□□□ -1.42
NUP84YDL116W YJR141WP47172 347 aaPredicted RBP6.16□□□□□ -1.42
NUP84YDL116W TIM21P53220 239 aa6.16□□□□□ -1.42
NUP84YDL116W OCA2P53949 197 aa6.16□□□□□ -1.42
NUP84YDL116W YPL108WQ02872 168 aaPredicted RBP6.16□□□□□ -1.42
NUP84YDL116W PML1Q07930 204 aaPredicted RBP6.16□□□□□ -1.42
NUP84YDL116W LEU9Q12166 604 aaKnown RBP6.16□□□□□ -1.42
NUP84YDL116W MCT1Q12283 360 aa6.16□□□□□ -1.42
NUP84YDL116W DCN1Q12395 269 aa6.16□□□□□ -1.42
NUP84YDL116W MRP10O75012 95 aa6.15□□□□□ -1.43
NUP84YDL116W TDH3P00359 332 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
NUP84YDL116W NUP1P20676 1076 aa6.15□□□□□ -1.43
NUP84YDL116W CPR4P25334 318 aa6.15□□□□□ -1.43
NUP84YDL116W LAC1P28496 418 aa6.15□□□□□ -1.43
NUP84YDL116W UPS2P35200 230 aa6.15□□□□□ -1.43
NUP84YDL116W FAT1P38225 669 aa6.15□□□□□ -1.43
NUP84YDL116W ERV15P38312 142 aa6.15□□□□□ -1.43
NUP84YDL116W TMA23Q03525 211 aa6.15□□□□□ -1.43
NUP84YDL116W PKR1Q03880 122 aaKnown RBP6.15□□□□□ -1.43
NUP84YDL116W THI74Q04083 370 aa6.15□□□□□ -1.43
NUP84YDL116W ASM4Q05166 528 aa6.15□□□□□ -1.43
NUP84YDL116W NNT1Q05874 261 aa6.15□□□□□ -1.43
NUP84YDL116W MCH4Q08268 501 aa6.15□□□□□ -1.43
NUP84YDL116W BSC6Q08280 497 aa6.15□□□□□ -1.43
NUP84YDL116W ENB1Q08299 606 aa6.15□□□□□ -1.43
NUP84YDL116W YDR262WQ12331 272 aa6.15□□□□□ -1.43
NUP84YDL116W COA2Q3E823 68 aa6.15□□□□□ -1.43
NUP84YDL116W ARF1P11076 181 aaKnown RBP6.14□□□□□ -1.43
NUP84YDL116W TRR1P29509 319 aaKnown RBP6.14□□□□□ -1.43
NUP84YDL116W FRM2P37261 193 aa6.14□□□□□ -1.43
NUP84YDL116W UBS1P38290 277 aa6.14□□□□□ -1.43
NUP84YDL116W FLX1P40464 311 aa6.14□□□□□ -1.43
NUP84YDL116W COQ5P49017 307 aa6.14□□□□□ -1.43
NUP84YDL116W TAF4P50105 388 aa6.14□□□□□ -1.43
NUP84YDL116W YMR265CQ03508 461 aaKnown RBP6.14□□□□□ -1.43
NUP84YDL116W UBA3Q99344 299 aa6.14□□□□□ -1.43
NUP84YDL116W YSF3P0C074 85 aaPredicted RBP6.14□□□□□ -1.43
NUP84YDL116W FPR1P20081 114 aaKnown RBP6.14□□□□□ -1.43
NUP84YDL116W SPO13P23624 291 aa6.14□□□□□ -1.43
NUP84YDL116W RTS2P40962 232 aa6.14□□□□□ -1.43
NUP84YDL116W IDP2P41939 412 aa6.14□□□□□ -1.43
NUP84YDL116W SPG5P42933 373 aa6.14□□□□□ -1.43
NUP84YDL116W BNA2P47125 453 aa6.14□□□□□ -1.43
NUP84YDL116W SEH1P53011 349 aaKnown RBP6.14□□□□□ -1.43
NUP84YDL116W YFT2Q06676 274 aa6.14□□□□□ -1.43
NUP84YDL116W VAM3Q12241 283 aa6.14□□□□□ -1.43
NUP84YDL116W SET6Q12529 373 aa6.14□□□□□ -1.43
NUP84YDL116W CYR1P08678 2026 aaKnown RBP6.13□□□□□ -1.43
NUP84YDL116W SEC59P20048 519 aa6.13□□□□□ -1.43
NUP84YDL116W YAL037WP39728 267 aa6.13□□□□□ -1.43
NUP84YDL116W LSM4P40070 187 aaKnown RBP6.13□□□□□ -1.43
NUP84YDL116W TRM9P49957 279 aa6.13□□□□□ -1.43
NUP84YDL116W MPP6P53725 186 aaPredicted RBP6.13□□□□□ -1.43
NUP84YDL116W ERG13P54839 491 aaKnown RBP6.13□□□□□ -1.43
NUP84YDL116W PAL1Q05518 499 aaKnown RBP6.13□□□□□ -1.43
NUP84YDL116W BNA5Q05979 453 aa6.13□□□□□ -1.43
NUP84YDL116W MRPL51Q06090 140 aaPredicted RBP6.13□□□□□ -1.43
NUP84YDL116W COQ10Q08058 207 aa6.13□□□□□ -1.43
NUP84YDL116W LAS17Q12446 633 aa6.13□□□□□ -1.43
NUP84YDL116W BRR2P32639 2163 aaKnown RBP6.13□□□□□ -1.43
NUP84YDL116W PTP1P25044 335 aa6.13□□□□□ -1.43
NUP84YDL116W YCR025CP25352 136 aa6.13□□□□□ -1.43
NUP84YDL116W POP5P28005 173 aa6.13□□□□□ -1.43
NUP84YDL116W EMP70P32802 667 aa6.13□□□□□ -1.43
NUP84YDL116W REC114P32841 428 aa6.13□□□□□ -1.43
NUP84YDL116W SEF1P34228 1148 aa6.13□□□□□ -1.43
NUP84YDL116W GPX1P36014 167 aa6.13□□□□□ -1.43
NUP84YDL116W MRPL4P36517 319 aa6.13□□□□□ -1.43
NUP84YDL116W HIT1P46973 164 aa6.13□□□□□ -1.43
NUP84YDL116W TDA7P53882 636 aaPredicted RBP6.13□□□□□ -1.43
NUP84YDL116W FSH2Q05015 223 aa6.13□□□□□ -1.43
NUP84YDL116W YDL242WQ07746 117 aa6.13□□□□□ -1.43
NUP84YDL116W RLM1Q12224 676 aa6.13□□□□□ -1.43
NUP84YDL116W YCT1Q12235 531 aa6.13□□□□□ -1.43
NUP84YDL116W CDC50P25656 391 aa6.12□□□□□ -1.43
NUP84YDL116W SWD2P36104 329 aaPredicted RBP6.12□□□□□ -1.43
NUP84YDL116W ERV14P53173 138 aa6.12□□□□□ -1.43
NUP84YDL116W CUZ1P53899 274 aa6.12□□□□□ -1.43
NUP84YDL116W TIM10P87108 93 aa6.12□□□□□ -1.43
NUP84YDL116W MIM1Q08176 113 aa6.12□□□□□ -1.43
NUP84YDL116W SME1Q12330 94 aaPredicted RBP6.12□□□□□ -1.43
NUP84YDL116W QCR2P07257 368 aa6.11□□□□□ -1.43
NUP84YDL116W BGL2P15703 313 aaKnown RBP6.11□□□□□ -1.43
NUP84YDL116W YIL152WP40455 235 aa6.11□□□□□ -1.43
NUP84YDL116W MRPS17Q03246 237 aaPredicted RBP6.11□□□□□ -1.43
NUP84YDL116W AVO2Q04749 426 aa6.11□□□□□ -1.43
NUP84YDL116W YOR352WQ08816 343 aa6.11□□□□□ -1.43
NUP84YDL116W YRA1Q12159 226 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 92.7 ms