RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK22	YCR073C	COA6	Q3E846	104 aa		5	□□□□□ -1.61
SSK22	YCR073C	FUN14	P18411	198 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	GSP1	P32835	219 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	GSP2	P32836	220 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	TRS65	P32893	560 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	RPL14A	P36105	138 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	RPL14B	P38754	138 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	SOL3	P38858	249 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	YLR152C	P54072	576 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	EGD1	Q02642	157 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	FPR1	P20081	114 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	DEG1	P31115	442 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	TRS20	P38334	175 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	YJL028W	P47062	111 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	YAP1802	P53309	568 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	YMR166C	Q03829	368 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	YDL242W	Q07746	117 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	ALG6	Q12001	544 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	POR1	P04840	283 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	RPS13	P05756	151 aa	Known RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	CTA1	P15202	515 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	SRP21	P32342	167 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	YGR269W	P40326	108 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	YGL262W	P53054	175 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	LST7	P53237	242 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	TDA7	P53882	636 aa	Predicted RBP	4.99	□□□□□ -1.61
SSK22	YCR073C	HMS1	Q12398	434 aa		4.99	□□□□□ -1.61
SSK22	YCR073C	AFR1	P33304	620 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	RTC3	P38804	111 aa	Predicted RBP	4.98	□□□□□ -1.61
SSK22	YCR073C	PET191	Q02772	108 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	IZH1	Q03419	316 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	MSC3	Q05812	728 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	FRQ1	Q06389	190 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	YDL157C	Q12082	118 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	YCL001W-B	Q96VH2	84 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	Q0182	Q9ZZW1	134 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	MDH2	P22133	377 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	YAL037W	P39728	267 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	YTA6	P40328	754 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	YIL169C	P40442	995 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	GMC1	Q04399	608 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	TVP18	Q04767	167 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	YOR378W	Q08902	515 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	YOR015W	Q12169	119 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	RLM1	Q12224	676 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	MRPL15	P36523	253 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	GPP1	P41277	250 aa	Known RBP	4.98	□□□□□ -1.61
SSK22	YCR073C	YMR178W	Q03219	274 aa	Known RBP	4.98	□□□□□ -1.61
SSK22	YCR073C	ATG10	Q07879	167 aa		4.98	□□□□□ -1.61
SSK22	YCR073C	NHP6A	P11632	93 aa	Known RBP	4.97	□□□□□ -1.61
SSK22	YCR073C	APM1	Q00776	475 aa	Predicted RBP	4.97	□□□□□ -1.61
SSK22	YCR073C	CPR1	P14832	162 aa	Known RBP	4.97	□□□□□ -1.61
SSK22	YCR073C	CDC28	P00546	298 aa	Known RBP	4.97	□□□□□ -1.61
SSK22	YCR073C	GLC7	P32598	312 aa	Known RBP	4.97	□□□□□ -1.61
SSK22	YCR073C	UTR5	P32630	166 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	TUB4	P53378	473 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	PAU4	P53427	120 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	YNR021W	P53723	404 aa	Known RBP	4.97	□□□□□ -1.61
SSK22	YCR073C	RSM23	Q01163	450 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	CTF19	Q02732	369 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	NCE101	Q02820	53 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	ELP4	Q02884	456 aa	Known RBP	4.97	□□□□□ -1.61
SSK22	YCR073C	EKI1	Q03764	534 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	SNA4	Q07549	140 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	YDR262W	Q12331	272 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	SRF1	Q12516	437 aa		4.97	□□□□□ -1.61
SSK22	YCR073C	TRP4	P07285	380 aa	Predicted RBP	4.96	□□□□□ -1.62
SSK22	YCR073C	ELO2	P25358	347 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	SHG1	P38337	142 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	NSA2	P40078	261 aa	Known RBP	4.96	□□□□□ -1.62
SSK22	YCR073C	MTQ2	Q03920	221 aa	Predicted RBP	4.96	□□□□□ -1.62
SSK22	YCR073C	YDR444W	Q04093	687 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	USV1	Q12132	391 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	FYV7	Q12247	151 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	LRO1	P40345	661 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	ZIM17	P42844	174 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	LOC1	P43586	204 aa	Predicted RBP	4.96	□□□□□ -1.62
SSK22	YCR073C	YDR248C	Q03786	193 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	YFT2	Q06676	274 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	BSC6	Q08280	497 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	RPL1A	P0CX43	217 aa	Known RBP	4.96	□□□□□ -1.62
SSK22	YCR073C	RPL1B	P0CX44	217 aa	Known RBP	4.96	□□□□□ -1.62
SSK22	YCR073C	MXR2	P25566	168 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	AFG1	P32317	509 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	CUZ1	P53899	274 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	NAT5	Q08689	176 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	FRE8	Q12209	686 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	FRE7	Q12333	620 aa		4.96	□□□□□ -1.62
SSK22	YCR073C	YMR262W	P38430	313 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	COX15	P40086	486 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	GAT2	P40209	560 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	MRX8	Q05473	314 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	FDH1	Q08911	376 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	YOR114W	Q12219	294 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	YLR146W-A	Q2V2P1	62 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	YBR197C	P38306	217 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	YER010C	P40011	234 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	FMP10	P40098	244 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	YGR017W	P53210	297 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	MSO1	P53604	210 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms