RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC18	YBR080C	YET2	Q04210	160 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	PDR5	P33302	1511 aa	Known RBP	4.83	□□□□□ -1.64
SEC18	YBR080C	ULS1	Q08562	1619 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	SCO1	P23833	295 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	AVT7	P40501	490 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	FAR7	P43592	221 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	COG7	P53195	279 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	FMN1	Q03778	218 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	YBR285W	P38354	144 aa		4.82	□□□□□ -1.64
SEC18	YBR080C	ACT1	P60010	375 aa	Known RBP	4.82	□□□□□ -1.64
SEC18	YBR080C	MRX11	Q03079	207 aa		4.82	□□□□□ -1.64
SEC18	YBR080C	RRP40	Q08285	240 aa	Known RBP	4.82	□□□□□ -1.64
SEC18	YBR080C	IES4	Q08561	116 aa		4.82	□□□□□ -1.64
SEC18	YBR080C	YPL257W	Q08974	193 aa		4.82	□□□□□ -1.64
SEC18	YBR080C	YHR214C-E	Q8TGK0	99 aa		4.82	□□□□□ -1.64
SEC18	YBR080C	GCN2	P15442	1659 aa		4.82	□□□□□ -1.64
SEC18	YBR080C	STE7	P06784	515 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	RPL2A	P0CX45	254 aa	Known RBP	4.81	□□□□□ -1.64
SEC18	YBR080C	RPL2B	P0CX46	254 aa	Known RBP	4.81	□□□□□ -1.64
SEC18	YBR080C	CDC50	P25656	391 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	GPI14	P47088	403 aa	Known RBP	4.81	□□□□□ -1.64
SEC18	YBR080C	YGR050C	P53231	118 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	GPI17	Q04080	534 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	AKR2	Q12013	749 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	PRR2	Q12310	699 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	PCL9	Q12477	304 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	TY3B-G	Q99315	1547 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	MMS1	Q06211	1407 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	ADK1	P07170	222 aa	Known RBP	4.81	□□□□□ -1.64
SEC18	YBR080C	OCH1	P31755	480 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	TRS65	P32893	560 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	NAT2	P37293	288 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	YHL044W	P38727	235 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	OST1	P41543	476 aa	Known RBP	4.81	□□□□□ -1.64
SEC18	YBR080C	ORM1	P53224	222 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	RNH201	P53942	307 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	PIR3	Q03180	325 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	YOR342C	Q12182	319 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	DRS2	P39524	1355 aa		4.81	□□□□□ -1.64
SEC18	YBR080C	CNB1	P25296	175 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	GSP1	P32835	219 aa	Known RBP	4.8	□□□□□ -1.64
SEC18	YBR080C	GSP2	P32836	220 aa	Known RBP	4.8	□□□□□ -1.64
SEC18	YBR080C	CSH1	P38287	376 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	HAC1	P41546	238 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	YJR015W	P47090	510 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	ECL1	P48235	211 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	YGR035C	P53222	116 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	NRM1	P53718	249 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	HPT1	Q04178	221 aa	Known RBP	4.8	□□□□□ -1.64
SEC18	YBR080C	HRI1	Q05905	244 aa	Known RBP	4.8	□□□□□ -1.64
SEC18	YBR080C	SHH4	Q06236	168 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	AIM39	Q08223	395 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	ESC1	Q03661	1658 aa	Known RBP	4.8	□□□□□ -1.64
SEC18	YBR080C	RPS18A	P0CX55	146 aa	Known RBP	4.8	□□□□□ -1.64
SEC18	YBR080C	RPS18B	P0CX56	146 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC18	YBR080C	ATS1	P31386	333 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	PGD1	P40356	397 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	ERV29	P53337	310 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	NSG2	P53898	299 aa		4.8	□□□□□ -1.64
SEC18	YBR080C	YKL102C	P34249	101 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	MAM33	P40513	266 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	MAK3	Q03503	176 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	MRX8	Q05473	314 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	DTD1	Q07648	150 aa	Known RBP	4.79	□□□□□ -1.64
SEC18	YBR080C	ATP16	Q12165	160 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	PSK1	P31374	1356 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	SPL2	P38839	148 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	PTI1	P39927	425 aa	Predicted RBP	4.79	□□□□□ -1.64
SEC18	YBR080C	ARP3	P47117	449 aa	Known RBP	4.79	□□□□□ -1.64
SEC18	YBR080C	YGL101W	P53144	215 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	FMP48	P53233	369 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	YPL113C	Q02961	396 aa		4.79	□□□□□ -1.64
SEC18	YBR080C	SYC1	Q08553	188 aa	Predicted RBP	4.79	□□□□□ -1.64
SEC18	YBR080C	PIS1	P06197	220 aa	Known RBP	4.78	□□□□□ -1.64
SEC18	YBR080C	BUD23	P25627	275 aa	Predicted RBP	4.78	□□□□□ -1.64
SEC18	YBR080C	BIR1	P47134	954 aa		4.78	□□□□□ -1.64
SEC18	YBR080C	AAH1	P53909	347 aa		4.78	□□□□□ -1.64
SEC18	YBR080C	IMP4	P53941	290 aa	Known RBP	4.78	□□□□□ -1.64
SEC18	YBR080C	YNL010W	P53981	241 aa	Known RBP	4.78	□□□□□ -1.64
SEC18	YBR080C	CDC7	P06243	507 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	MRPL17	P36528	281 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	YBL081W	P38180	368 aa	Known RBP	4.77	□□□□□ -1.65
SEC18	YBR080C	COX14	P39103	70 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	SDT1	P53078	280 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	SDS23	P53172	527 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	ADD37	Q03233	198 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	ADH1	P00330	348 aa	Known RBP	4.77	□□□□□ -1.65
SEC18	YBR080C	IPP1	P00817	287 aa	Known RBP	4.77	□□□□□ -1.65
SEC18	YBR080C	RPL42A	P0CX27	106 aa	Known RBP	4.77	□□□□□ -1.65
SEC18	YBR080C	RPL42B	P0CX28	106 aa	Known RBP	4.77	□□□□□ -1.65
SEC18	YBR080C	YEA4	P40004	342 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	APQ12	P40532	138 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	YGR018C	P53211	109 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	YPL245W	Q12179	454 aa	Known RBP	4.77	□□□□□ -1.65
SEC18	YBR080C	FYV7	Q12247	151 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	YAL063C-A	Q3E791	96 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	YPR053C	Q6Q5F3	151 aa		4.77	□□□□□ -1.65
SEC18	YBR080C	GEA2	P39993	1459 aa	Known RBP	4.77	□□□□□ -1.65
SEC18	YBR080C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.77	□□□□□ -1.65
SEC18	YBR080C	POP8	P38208	133 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms