RNA–Protein interactions for RNA: YBL056W

PTC3, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC3, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC3YBL056W MRPL27P36526 146 aaPredicted RBP5.37□□□□□ -1.55
PTC3YBL056W LNP1P38878 278 aa5.37□□□□□ -1.55
PTC3YBL056W GON7P46984 123 aa5.37□□□□□ -1.55
PTC3YBL056W MRX5P47007 382 aa5.37□□□□□ -1.55
PTC3YBL056W TEX1P53851 422 aaKnown RBP5.37□□□□□ -1.55
PTC3YBL056W GMC1Q04399 608 aa5.37□□□□□ -1.55
PTC3YBL056W YDR114CQ04597 100 aa5.37□□□□□ -1.55
PTC3YBL056W YMR254CQ04838 102 aa5.37□□□□□ -1.55
PTC3YBL056W SNA4Q07549 140 aa5.37□□□□□ -1.55
PTC3YBL056W FCY22Q12119 530 aa5.37□□□□□ -1.55
PTC3YBL056W BPH1P25356 2167 aa5.37□□□□□ -1.55
PTC3YBL056W URA3P03962 267 aa5.36□□□□□ -1.55
PTC3YBL056W NHP6BP11633 99 aaKnown RBP5.36□□□□□ -1.55
PTC3YBL056W YCR101CP25607 182 aa5.36□□□□□ -1.55
PTC3YBL056W OCH1P31755 480 aa5.36□□□□□ -1.55
PTC3YBL056W YBR242WP38331 238 aa5.36□□□□□ -1.55
PTC3YBL056W PRS2P38620 318 aaKnown RBP5.36□□□□□ -1.55
PTC3YBL056W YER121WP40076 114 aa5.36□□□□□ -1.55
PTC3YBL056W CCS1P40202 249 aaKnown RBP5.36□□□□□ -1.55
PTC3YBL056W YIL012WP40551 113 aa5.36□□□□□ -1.55
PTC3YBL056W RSM27P53305 110 aa5.36□□□□□ -1.55
PTC3YBL056W MRPS16Q02608 121 aa5.36□□□□□ -1.55
PTC3YBL056W RNA14P25298 677 aaKnown RBP5.35□□□□□ -1.55
PTC3YBL056W ATG22P25568 528 aa5.35□□□□□ -1.55
PTC3YBL056W ERG3P32353 365 aa5.35□□□□□ -1.55
PTC3YBL056W MRPL3P36516 390 aa5.35□□□□□ -1.55
PTC3YBL056W SWD3P38123 315 aa5.35□□□□□ -1.55
PTC3YBL056W CTR2P38865 189 aa5.35□□□□□ -1.55
PTC3YBL056W SLM1P40485 686 aa5.35□□□□□ -1.55
PTC3YBL056W RPS0BP46654 252 aaKnown RBP5.35□□□□□ -1.55
PTC3YBL056W BNA2P47125 453 aa5.35□□□□□ -1.55
PTC3YBL056W HNT2P49775 206 aa5.35□□□□□ -1.55
PTC3YBL056W SBH2P52871 88 aa5.35□□□□□ -1.55
PTC3YBL056W ARG5,6Q01217 863 aa5.35□□□□□ -1.55
PTC3YBL056W YPL067CQ02754 198 aa5.35□□□□□ -1.55
PTC3YBL056W PRM15Q03262 622 aa5.35□□□□□ -1.55
PTC3YBL056W YML018CQ03730 393 aa5.35□□□□□ -1.55
PTC3YBL056W CAC2Q04199 468 aa5.35□□□□□ -1.55
PTC3YBL056W UPS1Q05776 175 aa5.35□□□□□ -1.55
PTC3YBL056W SYM1Q06563 197 aa5.35□□□□□ -1.55
PTC3YBL056W CPR4P25334 318 aa5.34□□□□□ -1.55
PTC3YBL056W LSM1P47017 172 aaKnown RBP5.34□□□□□ -1.55
PTC3YBL056W YJR011CP47086 261 aaPredicted RBP5.34□□□□□ -1.55
PTC3YBL056W FRE8Q12209 686 aa5.34□□□□□ -1.55
PTC3YBL056W RDI1Q12434 202 aa5.34□□□□□ -1.55
PTC3YBL056W ATG40Q99325 256 aa5.34□□□□□ -1.55
PTC3YBL056W PET20Q99373 253 aa5.34□□□□□ -1.55
PTC3YBL056W Q0297Q9ZZV8 51 aa5.34□□□□□ -1.55
PTC3YBL056W RAD52P06778 471 aaKnown RBP5.33□□□□□ -1.56
PTC3YBL056W SEN2P16658 377 aa5.33□□□□□ -1.56
PTC3YBL056W ACH1P32316 526 aa5.33□□□□□ -1.56
PTC3YBL056W RPB7P34087 171 aa5.33□□□□□ -1.56
PTC3YBL056W SGN1P40561 250 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
PTC3YBL056W NCA3P46955 337 aa5.33□□□□□ -1.56
PTC3YBL056W DIE2P50076 525 aa5.33□□□□□ -1.56
PTC3YBL056W GPG1P53130 126 aa5.33□□□□□ -1.56
PTC3YBL056W GTF1P53260 183 aaPredicted RBP5.33□□□□□ -1.56
PTC3YBL056W GIM3P53900 129 aa5.33□□□□□ -1.56
PTC3YBL056W MRPL13Q02204 264 aa5.33□□□□□ -1.56
PTC3YBL056W NRG1Q03125 231 aa5.33□□□□□ -1.56
PTC3YBL056W YOR029WQ12243 111 aa5.33□□□□□ -1.56
PTC3YBL056W YCL048W-AQ2V2Q2 79 aa5.33□□□□□ -1.56
PTC3YBL056W YOR192C-CQ3E736 78 aa5.33□□□□□ -1.56
PTC3YBL056W YMR105W-AQ8TGS8 64 aa5.33□□□□□ -1.56
PTC3YBL056W GAL1P04385 528 aa5.32□□□□□ -1.56
PTC3YBL056W BUD23P25627 275 aaPredicted RBP5.32□□□□□ -1.56
PTC3YBL056W PAN3P36102 679 aaPredicted RBP5.32□□□□□ -1.56
PTC3YBL056W NTC20P38302 140 aaPredicted RBP5.32□□□□□ -1.56
PTC3YBL056W YIR020CP40575 100 aa5.32□□□□□ -1.56
PTC3YBL056W SOL1P50278 321 aa5.32□□□□□ -1.56
PTC3YBL056W GEP7P53171 287 aa5.32□□□□□ -1.56
PTC3YBL056W OKP1P53298 406 aa5.32□□□□□ -1.56
PTC3YBL056W ALG9P53868 555 aaKnown RBP5.32□□□□□ -1.56
PTC3YBL056W SMX3P54999 86 aaPredicted RBP5.32□□□□□ -1.56
PTC3YBL056W VBA1Q04301 562 aa5.32□□□□□ -1.56
PTC3YBL056W DAL4Q04895 635 aa5.32□□□□□ -1.56
PTC3YBL056W LIP2Q06005 328 aa5.32□□□□□ -1.56
PTC3YBL056W YOL118CQ08259 102 aa5.32□□□□□ -1.56
PTC3YBL056W SCM3Q12334 223 aa5.32□□□□□ -1.56
PTC3YBL056W RTR2Q12378 196 aa5.32□□□□□ -1.56
PTC3YBL056W YLR365WQ7LIF2 110 aa5.32□□□□□ -1.56
PTC3YBL056W UBA3Q99344 299 aa5.32□□□□□ -1.56
PTC3YBL056W APA2P22108 325 aa5.31□□□□□ -1.56
PTC3YBL056W MIR1P23641 311 aaKnown RBP5.31□□□□□ -1.56
PTC3YBL056W YCR016WP25617 290 aaKnown RBP5.31□□□□□ -1.56
PTC3YBL056W PPQ1P32945 549 aa5.31□□□□□ -1.56
PTC3YBL056W SWD2P36104 329 aaPredicted RBP5.31□□□□□ -1.56
PTC3YBL056W POP8P38208 133 aa5.31□□□□□ -1.56
PTC3YBL056W ALG14P38242 237 aa5.31□□□□□ -1.56
PTC3YBL056W PRM5P40476 318 aa5.31□□□□□ -1.56
PTC3YBL056W PIR5P46999 287 aa5.31□□□□□ -1.56
PTC3YBL056W XPT1P47165 209 aa5.31□□□□□ -1.56
PTC3YBL056W SLX9P53251 210 aaPredicted RBP5.31□□□□□ -1.56
PTC3YBL056W FIT1Q04433 528 aa5.31□□□□□ -1.56
PTC3YBL056W YDR286CQ05530 114 aa5.31□□□□□ -1.56
PTC3YBL056W RFM1Q12192 310 aa5.31□□□□□ -1.56
PTC3YBL056W SPO24Q3E752 67 aa5.31□□□□□ -1.56
PTC3YBL056W URA2P07259 2214 aaKnown RBP5.31□□□□□ -1.56
PTC3YBL056W CKA1P15790 372 aa5.31□□□□□ -1.56
PTC3YBL056W FUS3P16892 353 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms