RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W YML108WQ03759 105 aa2.96□□□□□ -1.94
NUP60YAR002W MIX14Q04341 121 aa2.96□□□□□ -1.94
NUP60YAR002W MDM30Q05930 598 aa2.96□□□□□ -1.94
NUP60YAR002W ANT1Q06497 328 aa2.96□□□□□ -1.94
NUP60YAR002W SYM1Q06563 197 aa2.96□□□□□ -1.94
NUP60YAR002W FEX2Q08991 375 aa2.96□□□□□ -1.94
NUP60YAR002W ISA2Q12425 185 aa2.96□□□□□ -1.94
NUP60YAR002W TFB5Q3E7C1 72 aaPredicted RBP2.96□□□□□ -1.94
NUP60YAR002W TPI1P00942 248 aaKnown RBP2.95□□□□□ -1.94
NUP60YAR002W MES1P00958 751 aaKnown RBP2.95□□□□□ -1.94
NUP60YAR002W CDC36P06100 191 aaPredicted RBP2.95□□□□□ -1.94
NUP60YAR002W MDH2P22133 377 aa2.95□□□□□ -1.94
NUP60YAR002W SEC22P22214 214 aa2.95□□□□□ -1.94
NUP60YAR002W ERG8P24521 451 aa2.95□□□□□ -1.94
NUP60YAR002W RFA3P26755 122 aaKnown RBP2.95□□□□□ -1.94
NUP60YAR002W TRR1P29509 319 aaKnown RBP2.95□□□□□ -1.94
NUP60YAR002W ERG3P32353 365 aa2.95□□□□□ -1.94
NUP60YAR002W YBL010CP32788 280 aa2.95□□□□□ -1.94
NUP60YAR002W SOF1P33750 489 aaKnown RBP2.95□□□□□ -1.94
NUP60YAR002W POP8P38208 133 aa2.95□□□□□ -1.94
NUP60YAR002W YPC1P38298 316 aa2.95□□□□□ -1.94
NUP60YAR002W SDH8P38345 138 aa2.95□□□□□ -1.94
NUP60YAR002W PAC2P39937 518 aa2.95□□□□□ -1.94
NUP60YAR002W BMT5P40493 336 aa2.95□□□□□ -1.94
NUP60YAR002W CTK2P46962 323 aa2.95□□□□□ -1.94
NUP60YAR002W NIF3P53081 288 aa2.95□□□□□ -1.94
NUP60YAR002W YGL159WP53110 370 aa2.95□□□□□ -1.94
NUP60YAR002W DIG2Q03373 323 aaKnown RBP2.95□□□□□ -1.94
NUP60YAR002W YML018CQ03730 393 aa2.95□□□□□ -1.94
NUP60YAR002W YDR248CQ03786 193 aa2.95□□□□□ -1.94
NUP60YAR002W NUP53Q03790 475 aa2.95□□□□□ -1.94
NUP60YAR002W NOC4Q06512 552 aaPredicted RBP2.95□□□□□ -1.94
NUP60YAR002W TFC7Q12415 435 aa2.95□□□□□ -1.94
NUP60YAR002W ERP4Q12450 207 aa2.95□□□□□ -1.94
NUP60YAR002W FLO9P39712 1322 aa2.94□□□□□ -1.94
NUP60YAR002W YFR010W-AP0C5N0 62 aa2.94□□□□□ -1.94
NUP60YAR002W TIP1P27654 210 aaPredicted RBP2.94□□□□□ -1.94
NUP60YAR002W PDC2P32896 925 aa2.94□□□□□ -1.94
NUP60YAR002W VAM7P32912 316 aa2.94□□□□□ -1.94
NUP60YAR002W SRY1P36007 326 aa2.94□□□□□ -1.94
NUP60YAR002W YPT10P38146 199 aa2.94□□□□□ -1.94
NUP60YAR002W YBR096WP38256 230 aa2.94□□□□□ -1.94
NUP60YAR002W GCV3P39726 170 aaPredicted RBP2.94□□□□□ -1.94
NUP60YAR002W ATF1P40353 525 aa2.94□□□□□ -1.94
NUP60YAR002W GLR1P41921 483 aaKnown RBP2.94□□□□□ -1.94
NUP60YAR002W ECO1P43605 281 aa2.94□□□□□ -1.94
NUP60YAR002W YJL016WP47072 561 aa2.94□□□□□ -1.94
NUP60YAR002W ADO1P47143 340 aaKnown RBP2.94□□□□□ -1.94
NUP60YAR002W YJR111CP47148 283 aaKnown RBP2.94□□□□□ -1.94
NUP60YAR002W PHB2P50085 310 aa2.94□□□□□ -1.94
NUP60YAR002W UBP8P50102 471 aa2.94□□□□□ -1.94
NUP60YAR002W AVT4P50944 713 aa2.94□□□□□ -1.94
NUP60YAR002W PCP1P53259 346 aa2.94□□□□□ -1.94
NUP60YAR002W ALG9P53868 555 aaKnown RBP2.94□□□□□ -1.94
NUP60YAR002W INN1P53901 409 aa2.94□□□□□ -1.94
NUP60YAR002W MOT3P54785 490 aaKnown RBP2.94□□□□□ -1.94
NUP60YAR002W RSM23Q01163 450 aa2.94□□□□□ -1.94
NUP60YAR002W CAB5Q03941 241 aa2.94□□□□□ -1.94
NUP60YAR002W YDR387CQ04162 555 aa2.94□□□□□ -1.94
NUP60YAR002W MRX9Q07349 420 aaKnown RBP2.94□□□□□ -1.94
NUP60YAR002W SCP1Q08873 200 aa2.94□□□□□ -1.94
NUP60YAR002W YLR108CQ12259 485 aa2.94□□□□□ -1.94
NUP60YAR002W EAF3Q12432 401 aa2.94□□□□□ -1.94
NUP60YAR002W YJR112W-AQ3E743 109 aa2.94□□□□□ -1.94
NUP60YAR002W BRR2P32639 2163 aaKnown RBP2.94□□□□□ -1.94
NUP60YAR002W TDH3P00359 332 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
NUP60YAR002W COX5BP00425 151 aa2.93□□□□□ -1.94
NUP60YAR002W RPS16AP0CX51 143 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W RPS16BP0CX52 143 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W RPL30P14120 105 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W FUS3P16892 353 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W IFM1P25038 676 aa2.93□□□□□ -1.94
NUP60YAR002W AGA2P32781 87 aa2.93□□□□□ -1.94
NUP60YAR002W EMP24P32803 203 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W COS8P38723 381 aa2.93□□□□□ -1.94
NUP60YAR002W LSM12P38828 187 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W ASP1P38986 381 aaPredicted RBP2.93□□□□□ -1.94
NUP60YAR002W SSO2P39926 295 aa2.93□□□□□ -1.94
NUP60YAR002W YIR035CP40579 254 aa2.93□□□□□ -1.94
NUP60YAR002W MOB2P43563 287 aa2.93□□□□□ -1.94
NUP60YAR002W GNA1P43577 159 aaPredicted RBP2.93□□□□□ -1.94
NUP60YAR002W YHC3P47040 408 aa2.93□□□□□ -1.94
NUP60YAR002W YJR011CP47086 261 aaPredicted RBP2.93□□□□□ -1.94
NUP60YAR002W NSA1P53136 463 aaPredicted RBP2.93□□□□□ -1.94
NUP60YAR002W YNR048WP53740 393 aa2.93□□□□□ -1.94
NUP60YAR002W ACT1P60010 375 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W HHT1P61830 136 aa2.93□□□□□ -1.94
NUP60YAR002W YDR209CQ03480 137 aa2.93□□□□□ -1.94
NUP60YAR002W RTT103Q05543 409 aa2.93□□□□□ -1.94
NUP60YAR002W GRC3Q07845 632 aa2.93□□□□□ -1.94
NUP60YAR002W VAM3Q12241 283 aa2.93□□□□□ -1.94
NUP60YAR002W UBA3Q99344 299 aa2.93□□□□□ -1.94
NUP60YAR002W CDC28P00546 298 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W REP2P03872 296 aa2.93□□□□□ -1.94
NUP60YAR002W QCR2P07257 368 aa2.93□□□□□ -1.94
NUP60YAR002W SSA3P09435 649 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W CPR3P25719 182 aa2.93□□□□□ -1.94
NUP60YAR002W LAG1P38703 411 aa2.93□□□□□ -1.94
NUP60YAR002W LNP1P38878 278 aa2.93□□□□□ -1.94
NUP60YAR002W YND1P40009 630 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms