RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YOR343CQ12484 108 aa3.6□□□□□ -1.83
PTA1YAL043C PUT1P09368 476 aa3.59□□□□□ -1.83
PTA1YAL043C PDX1P16451 410 aa3.59□□□□□ -1.83
PTA1YAL043C FMT1P32785 401 aa3.59□□□□□ -1.83
PTA1YAL043C MNS1P32906 549 aa3.59□□□□□ -1.83
PTA1YAL043C GPX1P36014 167 aa3.59□□□□□ -1.83
PTA1YAL043C ATG8P38182 117 aaRIP-Chip data3.59□□□□□ -1.83not detected
PTA1YAL043C BAT1P38891 393 aaKnown RBP3.59□□□□□ -1.83
PTA1YAL043C FLO5P38894 1075 aa3.59□□□□□ -1.83
PTA1YAL043C SLM1P40485 686 aa3.59□□□□□ -1.83
PTA1YAL043C ERJ5P43613 295 aaPredicted RBP3.59□□□□□ -1.83
PTA1YAL043C ADO1P47143 340 aaKnown RBP3.59□□□□□ -1.83
PTA1YAL043C YGR126WP53274 230 aa3.59□□□□□ -1.83
PTA1YAL043C ERG13P54839 491 aaKnown RBP3.59□□□□□ -1.83
PTA1YAL043C ACT1P60010 375 aaKnown RBP3.59□□□□□ -1.83
PTA1YAL043C ASM4Q05166 528 aa3.59□□□□□ -1.83
PTA1YAL043C LUC7Q07508 261 aaPredicted RBP3.59□□□□□ -1.83
PTA1YAL043C MIM1Q08176 113 aa3.59□□□□□ -1.83
PTA1YAL043C YRA1Q12159 226 aaKnown RBP3.59□□□□□ -1.83
PTA1YAL043C DGK1Q12382 290 aa3.59□□□□□ -1.83
PTA1YAL043C YAL064W-BO13512 126 aa3.59□□□□□ -1.84
PTA1YAL043C MDM35O60200 86 aa3.59□□□□□ -1.84
PTA1YAL043C COX5BP00425 151 aa3.59□□□□□ -1.84
PTA1YAL043C RFA1P22336 621 aaKnown RBP3.59□□□□□ -1.84
PTA1YAL043C IFM1P25038 676 aa3.59□□□□□ -1.84
PTA1YAL043C LDS1P31379 325 aa3.59□□□□□ -1.84
PTA1YAL043C MRPL27P36526 146 aaPredicted RBP3.59□□□□□ -1.84
PTA1YAL043C IMD2P38697 523 aaKnown RBP3.59□□□□□ -1.84
PTA1YAL043C FMO1P38866 432 aa3.59□□□□□ -1.84
PTA1YAL043C OYE3P41816 400 aaPredicted RBP3.59□□□□□ -1.84
PTA1YAL043C SHR5P41912 237 aa3.59□□□□□ -1.84
PTA1YAL043C LSB3P43603 459 aaKnown RBP3.59□□□□□ -1.84
PTA1YAL043C CCC1P47818 322 aa3.59□□□□□ -1.84
PTA1YAL043C AVT4P50944 713 aa3.59□□□□□ -1.84
PTA1YAL043C RUB1Q03919 77 aa3.59□□□□□ -1.84
PTA1YAL043C TDA6Q06466 467 aa3.59□□□□□ -1.84
PTA1YAL043C MCH4Q08268 501 aa3.59□□□□□ -1.84
PTA1YAL043C BSC6Q08280 497 aa3.59□□□□□ -1.84
PTA1YAL043C RLM1Q12224 676 aa3.59□□□□□ -1.84
PTA1YAL043C PRS5Q12265 496 aaKnown RBP3.59□□□□□ -1.84
PTA1YAL043C POF1P25576 258 aa3.58□□□□□ -1.84
PTA1YAL043C COQ2P32378 372 aa3.58□□□□□ -1.84
PTA1YAL043C YER010CP40011 234 aa3.58□□□□□ -1.84
PTA1YAL043C SMB1P40018 196 aaKnown RBP3.58□□□□□ -1.84
PTA1YAL043C UFD1P53044 361 aa3.58□□□□□ -1.84
PTA1YAL043C SCW4P53334 386 aaKnown RBP3.58□□□□□ -1.84
PTA1YAL043C ARL3Q02804 198 aa3.58□□□□□ -1.84
PTA1YAL043C IRC13Q08630 104 aa3.58□□□□□ -1.84
PTA1YAL043C YOR385WQ08909 290 aa3.58□□□□□ -1.84
PTA1YAL043C GLO4Q12320 285 aa3.58□□□□□ -1.84
PTA1YAL043C SWM1Q12379 170 aa3.58□□□□□ -1.84
PTA1YAL043C YDR034W-BQ6Q5X2 51 aa3.58□□□□□ -1.84
PTA1YAL043C QCR7P00128 127 aa3.58□□□□□ -1.84
PTA1YAL043C RIP1P08067 215 aa3.58□□□□□ -1.84
PTA1YAL043C CPR4P25334 318 aa3.58□□□□□ -1.84
PTA1YAL043C REC114P32841 428 aa3.58□□□□□ -1.84
PTA1YAL043C NTF2P33331 125 aaKnown RBP3.58□□□□□ -1.84
PTA1YAL043C YKL162CP36052 402 aa3.58□□□□□ -1.84
PTA1YAL043C IDP2P41939 412 aa3.58□□□□□ -1.84
PTA1YAL043C MRX5P47007 382 aa3.58□□□□□ -1.84
PTA1YAL043C LSM8P47093 109 aaKnown RBP3.58□□□□□ -1.84
PTA1YAL043C MPP6P53725 186 aaPredicted RBP3.58□□□□□ -1.84
PTA1YAL043C YMR279CQ03263 540 aa3.58□□□□□ -1.84
PTA1YAL043C IRC19Q07843 230 aa3.58□□□□□ -1.84
PTA1YAL043C COQ10Q08058 207 aa3.58□□□□□ -1.84
PTA1YAL043C HUT1Q12520 339 aa3.58□□□□□ -1.84
PTA1YAL043C FMP27Q06179 2628 aa3.57□□□□□ -1.84
PTA1YAL043C TDH3P00359 332 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
PTA1YAL043C MSW1P04803 379 aa3.57□□□□□ -1.84
PTA1YAL043C YCR006CP25350 157 aa3.57□□□□□ -1.84
PTA1YAL043C TRR1P29509 319 aaKnown RBP3.57□□□□□ -1.84
PTA1YAL043C GSP1P32835 219 aaKnown RBP3.57□□□□□ -1.84
PTA1YAL043C GSP2P32836 220 aaKnown RBP3.57□□□□□ -1.84
PTA1YAL043C IKI1P38874 309 aa3.57□□□□□ -1.84
PTA1YAL043C SEN34P39707 275 aa3.57□□□□□ -1.84
PTA1YAL043C YND1P40009 630 aa3.57□□□□□ -1.84
PTA1YAL043C GET2P40056 285 aa3.57□□□□□ -1.84
PTA1YAL043C GPP2P40106 250 aaKnown RBP3.57□□□□□ -1.84
PTA1YAL043C HXT14P42833 540 aa3.57□□□□□ -1.84
PTA1YAL043C SSU72P53538 206 aaPredicted RBP3.57□□□□□ -1.84
PTA1YAL043C YLR460CP54007 376 aa3.57□□□□□ -1.84
PTA1YAL043C YDR415CQ04033 374 aaPredicted RBP3.57□□□□□ -1.84
PTA1YAL043C YDR387CQ04162 555 aa3.57□□□□□ -1.84
PTA1YAL043C CAC2Q04199 468 aa3.57□□□□□ -1.84
PTA1YAL043C MIX14Q04341 121 aa3.57□□□□□ -1.84
PTA1YAL043C ERP1Q05359 219 aaKnown RBP3.57□□□□□ -1.84
PTA1YAL043C SYM1Q06563 197 aa3.57□□□□□ -1.84
PTA1YAL043C ZEO1Q08245 113 aa3.57□□□□□ -1.84
PTA1YAL043C RDL2Q08742 149 aaKnown RBP3.57□□□□□ -1.84
PTA1YAL043C MCP1Q12106 302 aa3.57□□□□□ -1.84
PTA1YAL043C VAM3Q12241 283 aa3.57□□□□□ -1.84
PTA1YAL043C MCT1Q12283 360 aa3.57□□□□□ -1.84
PTA1YAL043C MES1P00958 751 aaKnown RBP3.56□□□□□ -1.84
PTA1YAL043C SPO13P23624 291 aa3.56□□□□□ -1.84
PTA1YAL043C TCA17P32613 152 aa3.56□□□□□ -1.84
PTA1YAL043C YBR013CP38215 129 aa3.56□□□□□ -1.84
PTA1YAL043C CDS1P38221 457 aa3.56□□□□□ -1.84
PTA1YAL043C PGD1P40356 397 aa3.56□□□□□ -1.84
PTA1YAL043C CUP9P41817 306 aa3.56□□□□□ -1.84
PTA1YAL043C NIF3P53081 288 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms