RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 YDR387CQ04162 555 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 ERP1Q05359 219 aaKnown RBP8.87□□□□□ -0.99
RDN18-2RDN18-2 FCF2Q12035 217 aaPredicted RBP8.87□□□□□ -0.99
RDN18-2RDN18-2 MED4Q12343 284 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 HBN1Q96VH4 193 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 ISN1Q99312 450 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 MRP2P10663 115 aaPredicted RBP8.86□□□□□ -0.99
RDN18-2RDN18-2 LDS1P31379 325 aa8.86□□□□□ -0.99
RDN18-2RDN18-2 OCH1P31755 480 aa8.86□□□□□ -0.99
RDN18-2RDN18-2 GLC7P32598 312 aaKnown RBP8.86□□□□□ -0.99
RDN18-2RDN18-2 YEA6P39953 335 aa8.86□□□□□ -0.99
RDN18-2RDN18-2 NCE102Q12207 173 aaRIP-Chip data8.86□□□□□ -0.99not detected
RDN18-2RDN18-2 PRS5Q12265 496 aaKnown RBP8.86□□□□□ -0.99
RDN18-2RDN18-2 MNS1P32906 549 aa8.85□□□□□ -0.99
RDN18-2RDN18-2 ECM31P38122 312 aa8.85□□□□□ -0.99
RDN18-2RDN18-2 ARC40P38328 384 aaKnown RBP8.85□□□□□ -0.99
RDN18-2RDN18-2 LNP1P38878 278 aa8.85□□□□□ -0.99
RDN18-2RDN18-2 UME6P39001 836 aa8.85□□□□□ -0.99
RDN18-2RDN18-2 PKP2P53170 491 aa8.85□□□□□ -0.99
RDN18-2RDN18-2 ATP16Q12165 160 aa8.85□□□□□ -0.99
RDN18-2RDN18-2 TY1A-LR4P0C2I8 440 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-DR6P0CX70 440 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-ER1P0CX71 440 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-LR2P0CX72 440 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-PLP0CX73 440 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-JR1P0CX74 440 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-LR3P0CX75 440 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-ML2P0CX76 440 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 ARO3P14843 370 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 VMA8P32610 256 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 MTC6P38849 526 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 SSN8P47821 323 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 PBP1P53297 722 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 HRI1Q05905 244 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 PIN2Q12057 282 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-GR1Q12085 440 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-PR3Q6Q5H1 440 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 TY1A-OLQ92392 440 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 TDH1P00360 332 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 VMA3P25515 160 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 DEG1P31115 442 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 ECM25P32525 599 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 ISC10P32645 267 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 YKL162CP36052 402 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 GPI15P53961 229 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 HAS1Q03532 505 aaKnown RBP8.84□□□□□ -0.99
RDN18-2RDN18-2 YOR186WQ08560 144 aa8.84□□□□□ -0.99
RDN18-2RDN18-2 CKA1P15790 372 aa8.83□□□□□ -1
RDN18-2RDN18-2 ERG2P32352 222 aa8.83□□□□□ -1
RDN18-2RDN18-2 SNO1Q03144 224 aa8.83□□□□□ -1
RDN18-2RDN18-2 USB1Q12208 290 aaKnown RBP8.83□□□□□ -1
RDN18-2RDN18-2 IZH2Q12442 317 aa8.83□□□□□ -1
RDN18-2RDN18-2 YLR365WQ7LIF2 110 aa8.83□□□□□ -1
RDN18-2RDN18-2 SAG1P20840 650 aa8.82□□□□□ -1
RDN18-2RDN18-2 NUD1P32336 851 aa8.82□□□□□ -1
RDN18-2RDN18-2 RPB7P34087 171 aa8.82□□□□□ -1
RDN18-2RDN18-2 POP2P39008 433 aa8.82□□□□□ -1
RDN18-2RDN18-2 IRC24P40580 263 aa8.82□□□□□ -1
RDN18-2RDN18-2 GPP1P41277 250 aaKnown RBP8.82□□□□□ -1
RDN18-2RDN18-2 SLX9P53251 210 aaPredicted RBP8.82□□□□□ -1
RDN18-2RDN18-2 YNR040WP53736 256 aa8.82□□□□□ -1
RDN18-2RDN18-2 APJ1P53940 528 aa8.82□□□□□ -1
RDN18-2RDN18-2 YCL001W-AP87012 153 aa8.82□□□□□ -1
RDN18-2RDN18-2 YAP6Q03935 383 aa8.82□□□□□ -1
RDN18-2RDN18-2 Q0144Q9ZZW2 109 aa8.82□□□□□ -1
RDN18-2RDN18-2 MSK1P32048 576 aa8.82□□□□□ -1
RDN18-2RDN18-2 MRPS5P33759 307 aa8.82□□□□□ -1
RDN18-2RDN18-2 YBR096WP38256 230 aa8.82□□□□□ -1
RDN18-2RDN18-2 QRI1P43123 477 aaKnown RBP8.82□□□□□ -1
RDN18-2RDN18-2 TSA2Q04120 196 aa8.82□□□□□ -1
RDN18-2RDN18-2 SDO1Q07953 250 aaKnown RBP8.82□□□□□ -1
RDN18-2RDN18-2 MSI1P13712 422 aa8.81□□□□□ -1
RDN18-2RDN18-2 STE4P18851 423 aa8.81□□□□□ -1
RDN18-2RDN18-2 SWD3P38123 315 aa8.81□□□□□ -1
RDN18-2RDN18-2 YER079WP40052 210 aaKnown RBP8.81□□□□□ -1
RDN18-2RDN18-2 IKS1P47042 667 aa8.81□□□□□ -1
RDN18-2RDN18-2 YJR056CP47115 236 aa8.81□□□□□ -1
RDN18-2RDN18-2 YIF1P53845 314 aaKnown RBP8.81□□□□□ -1
RDN18-2RDN18-2 FRE8Q12209 686 aa8.81□□□□□ -1
RDN18-2RDN18-2 YDL180WQ12301 547 aa8.81□□□□□ -1
RDN18-2RDN18-2 IPP1P00817 287 aaKnown RBP8.8□□□□□ -1
RDN18-2RDN18-2 CBP6P07253 162 aaPredicted RBP8.8□□□□□ -1
RDN18-2RDN18-2 MCH2P36032 473 aa8.8□□□□□ -1
RDN18-2RDN18-2 STS1P38637 319 aa8.8□□□□□ -1
RDN18-2RDN18-2 RPL13BP40212 199 aaKnown RBP8.8□□□□□ -1
RDN18-2RDN18-2 XBP1P40489 647 aa8.8□□□□□ -1
RDN18-2RDN18-2 OST1P41543 476 aaKnown RBP8.8□□□□□ -1
RDN18-2RDN18-2 RPA34P47006 233 aaPredicted RBP8.8□□□□□ -1
RDN18-2RDN18-2 YJR012CP47087 207 aa8.8□□□□□ -1
RDN18-2RDN18-2 ELA1P53861 379 aaPredicted RBP8.8□□□□□ -1
RDN18-2RDN18-2 YMR279CQ03263 540 aa8.8□□□□□ -1
RDN18-2RDN18-2 RFU1Q08003 200 aa8.8□□□□□ -1
RDN18-2RDN18-2 YOL118CQ08259 102 aa8.8□□□□□ -1
RDN18-2RDN18-2 RPL13AQ12690 199 aaPredicted RBP8.8□□□□□ -1
RDN18-2RDN18-2 YPR108W-AQ3E7B3 70 aa8.8□□□□□ -1
RDN18-2RDN18-2 COA2Q3E823 68 aa8.8□□□□□ -1
RDN18-2RDN18-2 RPL25P04456 142 aaKnown RBP8.8□□□□□ -1
RDN18-2RDN18-2 MRPL33P20084 86 aa8.8□□□□□ -1
RDN18-2RDN18-2 ATG15P25641 520 aa8.8□□□□□ -1
RDN18-2RDN18-2 UBS1P38290 277 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms