RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 C2CD2Q9Y426 696 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 PCDHA13Q9Y5I0 950 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 PDCD11Q14690 1871 aaKnown RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 ATP8B3O60423 1300 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 A0A0U1RQG5 324 aaPredicted RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 RCCD1A6NED2 376 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 KRT86O43790 486 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 KIF5CO60282 957 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 RPS6KA5O75582 802 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 CHRNA1P02708 482 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 TBXAS1P24557 533 aaPredicted RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 THPOP40225 353 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 USP8P40818 1118 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 MAGEA1P43355 309 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 YARSP54577 528 aaKnown RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 TMEM132DQ14C87 1099 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 TRIM71Q2Q1W2 868 aaKnown RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 CCDC122Q5T0U0 273 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 SYT10Q6XYQ8 523 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 C1orf127Q8N9H9 656 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 SLC43A3Q8NBI5 491 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 LNX1Q8TBB1 728 aaPredicted RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 DHX38Q92620 1227 aaKnown RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 ARID3AQ99856 593 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 TSGA10Q9BZW7 698 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 NXF3Q9H4D5 531 aaKnown RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 PLEKHA5Q9HAU0 1116 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 PAK6Q9NQU5 681 aaPredicted RBP12.27□□□□□ -0.45
SMAD4-205ENST00000588745 STARD7Q9NQZ5 370 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 ADAMTS1Q9UHI8 967 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 NUB1Q9Y5A7 615 aa12.27□□□□□ -0.45
SMAD4-205ENST00000588745 UMODL1Q5DID0 1318 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 DNM1LO00429 736 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 PJA2O43164 708 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 CAND2O75155 1236 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 CST3P01034 146 aaPredicted RBP12.26□□□□□ -0.45
SMAD4-205ENST00000588745 MYL6P60660 151 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 GNG11P61952 73 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 KIF5AQ12840 1032 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 SGSM1Q2NKQ1 1148 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 ZNF699Q32M78 642 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 FAM26DQ5JW98 314 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 C10orf76Q5T2E6 689 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 KIF18AQ8NI77 898 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 EPS8L1Q8TE68 723 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 ZNF592Q92610 1267 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 TAF4BQ92750 862 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 NIF3L1Q9GZT8 377 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 LACRTQ9GZZ8 138 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 MYO1AQ9UBC5 1043 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 TRIM10Q9UDY6 481 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 DNAI1Q9UI46 699 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 SIX4Q9UIU6 781 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 NAGPAQ9UK23 515 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 ST3GAL5Q9UNP4 418 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 TFR2Q9UP52 801 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 DERAQ9Y315 318 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 HES2Q9Y543 173 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 PCNTO95613 3336 aa12.26□□□□□ -0.45
SMAD4-205ENST00000588745 DDX3XO00571 662 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMAD4-205ENST00000588745 CYP26A1O43174 497 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 RECQL4O94761 1208 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 ABL1P00519 1130 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 ITGB3P05106 788 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 ACO1P21399 889 aaKnown RBP12.25□□□□□ -0.45
SMAD4-205ENST00000588745 PDE6CP51160 858 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 NAB2Q15742 525 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 FBXO47Q5MNV8 452 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 SCARA3Q6AZY7 606 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 SMYD5Q6GMV2 418 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 TWF2Q6IBS0 349 aaKnown RBP12.25□□□□□ -0.45
SMAD4-205ENST00000588745 ALKBH5Q6P6C2 394 aaKnown RBP12.25□□□□□ -0.45
SMAD4-205ENST00000588745 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 UBR7Q8N806 425 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 SLC30A5Q8TAD4 765 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 CXorf38Q8TB03 319 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 SLC20A1Q8WUM9 679 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 KIF12Q96FN5 646 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 AGPAT1Q99943 283 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 APOL6Q9BWW8 343 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
SMAD4-205ENST00000588745 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 CHST12Q9NRB3 414 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 CNTN3Q9P232 1028 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 NOCTQ9UK39 431 aaKnown RBP12.25□□□□□ -0.45
SMAD4-205ENST00000588745 ITGA11Q9UKX5 1188 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 GUCA1BQ9UMX6 200 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 IPPQ9Y573 584 aa12.25□□□□□ -0.45
SMAD4-205ENST00000588745 CENPFP49454 3210 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 ARVCFO00192 962 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 GPR182O15218 404 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 FANCGO15287 622 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 SGPL1O95470 568 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 KRT19P08727 400 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 KRT5P13647 590 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 CYP11B1P15538 503 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 TNFAIP3P21580 790 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 ATICP31939 592 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 ASPAP45381 313 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 NFX1Q12986 1120 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms