RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	OSTN	P61366	133 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	ASIC1	P78348	528 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	GRIK3	Q13003	919 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	ALCAM	Q13740	583 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	SLC10A6	Q3KNW5	377 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	SEZ6	Q53EL9	994 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZBTB41	Q5SVQ8	909 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	LUZP1	Q86V48	1076 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	SPATA20	Q8TB22	786 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	BICD1	Q96G01	975 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	SNX27	Q96L92	541 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZMAT2	Q96NC0	199 aa	Known RBP	10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	PPP1R10	Q96QC0	940 aa	Known RBP	10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	CCDC94	Q9BW85	323 aa	Predicted RBP	10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	GBP3	Q9H0R5	595 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	MARCH5	Q9NX47	278 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	CNTN3	Q9P232	1028 aa		10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	COL4A4	P53420	1690 aa	Predicted RBP	10.84	□□□□□ -0.67
CHEK2-221	ENST00000456369	SMIM28	A0A1B0GU29	152 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369		F8W810	466 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	ALDH2	P05091	517 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	CLTA	P09496	248 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	KCNE1	P15382	129 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	TNFSF9	P41273	254 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	KRT17	Q04695	432 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	DPYD	Q12882	1025 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	CCDC85B	Q15834	202 aa	Predicted RBP	10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	KYAT1	Q16773	422 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	TCEAL5	Q5H9L2	206 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	FAM26F	Q5R3K3	315 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	DDX53	Q86TM3	631 aa	Known RBP	10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	ZSCAN30	Q86W11	494 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	DHX40	Q8IX18	779 aa	Known RBP	10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	RNF168	Q8IYW5	571 aa	Predicted RBP	10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	ZNF507	Q8TCN5	953 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	SCFD1	Q8WVM8	642 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	SMARCE1	Q969G3	411 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	ACAP3	Q96P50	834 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	ACCS	Q96QU6	501 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	PAAF1	Q9BRP4	392 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	NSUN3	Q9H649	340 aa	Known RBP	10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	PLEKHA5	Q9HAU0	1116 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	TLR9	Q9NR96	1032 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	CACNG4	Q9UBN1	327 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	CPSF3	Q9UKF6	684 aa	Known RBP	10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	PCDHGC5	Q9Y5F6	944 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	RALGAPA2	Q2PPJ7	1873 aa		10.83	□□□□□ -0.68
CHEK2-221	ENST00000456369	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	TTC26	A0AVF1	554 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	ESPN	B1AK53	854 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	OGT	O15294	1046 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	EIF3D	O15371	548 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	PRPF6	O94906	941 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	PTMA	P06454	111 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	TH	P07101	528 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	CXCL8	P10145	99 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	HARS	P12081	509 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	CLCN1	P35523	988 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	YARS	P54577	528 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	SOX4	Q06945	474 aa	Predicted RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	HYAL1	Q12794	435 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	TUSC3	Q13454	348 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	PNOC	Q13519	176 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	ZBTB6	Q15916	424 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	ENOX2	Q16206	610 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	BMT2	Q1RMZ1	405 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	DPCR1	Q3MIW9	517 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	TIGD5	Q53EQ6	642 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	GLRA4	Q5JXX5	417 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	SLFN12L	Q6IEE8	588 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	PDE12	Q6L8Q7	609 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	MICALL1	Q8N3F8	863 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	MLKL	Q8NB16	471 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	PPM1E	Q8WY54	764 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	MRFAP1L1	Q96HT8	127 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	FAM193B	Q96PV7	902 aa	Predicted RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	GSDMA	Q96QA5	445 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	RPS6KC1	Q96S38	1066 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	TCF25	Q9BQ70	676 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	MSTO1	Q9BUK6	570 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	TMEM206	Q9H813	350 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	PRDM6	Q9NQX0	595 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	PUF60	Q9UHX1	559 aa	Known RBP	10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	EXOC7	Q9UPT5	735 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	FAN1	Q9Y2M0	1017 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	PCDHA5	Q9Y5H7	936 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	MYH11	P35749	1972 aa		10.82	□□□□□ -0.68
CHEK2-221	ENST00000456369	HIDE1	A8MVS5	230 aa		10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	TGFB1I1	O43294	461 aa		10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	LILRB3	O75022	631 aa		10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	RPN1	P04843	607 aa	Known RBP	10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	IGFBP6	P24592	240 aa	Predicted RBP	10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	MSN	P26038	577 aa	Known RBP	10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	OR1G1	P47890	313 aa		10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	ACOT2	P49753	483 aa		10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	POU5F1	Q01860	360 aa	Known RBP	10.81	□□□□□ -0.68
CHEK2-221	ENST00000456369	STK4	Q13043	487 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms