RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-221ENST00000456369 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
CHEK2-221ENST00000456369 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
CHEK2-221ENST00000456369 NISCHQ9Y2I1 1504 aa24.12■■□□□ 1.45
CHEK2-221ENST00000456369 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.17
CHEK2-221ENST00000456369 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
CHEK2-221ENST00000456369 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
CHEK2-221ENST00000456369 ABCC9O60706 1549 aa20.89■□□□□ 0.94
CHEK2-221ENST00000456369 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
CHEK2-221ENST00000456369 FOXD1Q16676 465 aa20.55■□□□□ 0.88
CHEK2-221ENST00000456369 NACADO15069 1562 aa20.11■□□□□ 0.81
CHEK2-221ENST00000456369 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
CHEK2-221ENST00000456369 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
CHEK2-221ENST00000456369 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
CHEK2-221ENST00000456369 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
CHEK2-221ENST00000456369 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
CHEK2-221ENST00000456369 ADRA2BP18089 450 aa19.75■□□□□ 0.75
CHEK2-221ENST00000456369 PPP6R1Q9UPN7 881 aa19.75■□□□□ 0.75
CHEK2-221ENST00000456369 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
CHEK2-221ENST00000456369 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHEK2-221ENST00000456369 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
CHEK2-221ENST00000456369 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
CHEK2-221ENST00000456369 PIAS4Q8N2W9 510 aaPredicted RBP19.4■□□□□ 0.7
CHEK2-221ENST00000456369 SHROOM4Q9ULL8 1493 aa19.33■□□□□ 0.68
CHEK2-221ENST00000456369 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
CHEK2-221ENST00000456369 EIF4G1Q04637 1599 aaKnown RBP18.99■□□□□ 0.63
CHEK2-221ENST00000456369 MSH5O43196 834 aa18.98■□□□□ 0.63
CHEK2-221ENST00000456369 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
CHEK2-221ENST00000456369 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
CHEK2-221ENST00000456369 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
CHEK2-221ENST00000456369 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
CHEK2-221ENST00000456369 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
CHEK2-221ENST00000456369 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
CHEK2-221ENST00000456369 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
CHEK2-221ENST00000456369 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
CHEK2-221ENST00000456369 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
CHEK2-221ENST00000456369 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
CHEK2-221ENST00000456369 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
CHEK2-221ENST00000456369 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
CHEK2-221ENST00000456369 WIZO95785 1651 aa18.34■□□□□ 0.53
CHEK2-221ENST00000456369 PPP4R3CPQ6ZMV5 832 aa18.18■□□□□ 0.5
CHEK2-221ENST00000456369 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
CHEK2-221ENST00000456369 NESP48681 1621 aa18.11■□□□□ 0.49
CHEK2-221ENST00000456369 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
CHEK2-221ENST00000456369 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
CHEK2-221ENST00000456369 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
CHEK2-221ENST00000456369 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
CHEK2-221ENST00000456369 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
CHEK2-221ENST00000456369 CFTRP13569 1480 aa17.96■□□□□ 0.47
CHEK2-221ENST00000456369 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
CHEK2-221ENST00000456369 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
CHEK2-221ENST00000456369 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
CHEK2-221ENST00000456369 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
CHEK2-221ENST00000456369 CUX2O14529 1486 aa17.81■□□□□ 0.44
CHEK2-221ENST00000456369 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
CHEK2-221ENST00000456369 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
CHEK2-221ENST00000456369 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
CHEK2-221ENST00000456369 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
CHEK2-221ENST00000456369 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
CHEK2-221ENST00000456369 WDR62O43379 1518 aa17.7■□□□□ 0.42
CHEK2-221ENST00000456369 KCNA4P22459 653 aa17.68■□□□□ 0.42
CHEK2-221ENST00000456369 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
CHEK2-221ENST00000456369 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
CHEK2-221ENST00000456369 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
CHEK2-221ENST00000456369 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
CHEK2-221ENST00000456369 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
CHEK2-221ENST00000456369 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
CHEK2-221ENST00000456369 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
CHEK2-221ENST00000456369 CUX1P39880 1505 aa17.43■□□□□ 0.38
CHEK2-221ENST00000456369 IFT140Q96RY7 1462 aa17.42■□□□□ 0.38
CHEK2-221ENST00000456369 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
CHEK2-221ENST00000456369 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
CHEK2-221ENST00000456369 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
CHEK2-221ENST00000456369 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
CHEK2-221ENST00000456369 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
CHEK2-221ENST00000456369 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
CHEK2-221ENST00000456369 SOGA1O94964 1423 aa17.33■□□□□ 0.36
CHEK2-221ENST00000456369 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.36
CHEK2-221ENST00000456369 RNF216Q9NWF9 866 aaPredicted RBP17.33■□□□□ 0.36
CHEK2-221ENST00000456369 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
CHEK2-221ENST00000456369 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
CHEK2-221ENST00000456369 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
CHEK2-221ENST00000456369 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
CHEK2-221ENST00000456369 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHEK2-221ENST00000456369 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
CHEK2-221ENST00000456369 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
CHEK2-221ENST00000456369 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
CHEK2-221ENST00000456369 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
CHEK2-221ENST00000456369 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
CHEK2-221ENST00000456369 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
CHEK2-221ENST00000456369 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
CHEK2-221ENST00000456369 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
CHEK2-221ENST00000456369 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
CHEK2-221ENST00000456369 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
CHEK2-221ENST00000456369 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
CHEK2-221ENST00000456369 MAGI1Q96QZ7 1491 aaPredicted RBP17.06■□□□□ 0.32
CHEK2-221ENST00000456369 SYNJ2O15056 1496 aa17■□□□□ 0.31
CHEK2-221ENST00000456369 DCAF8L1A6NGE4 600 aa17■□□□□ 0.31
CHEK2-221ENST00000456369 FBLN2P98095 1184 aa16.99■□□□□ 0.31
CHEK2-221ENST00000456369 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
CHEK2-221ENST00000456369 CHMP7Q8WUX9 453 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms