RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 PKN2Q16513 984 aaKnown RBP21.75■■□□□ 1.07
VRK2-207ENST00000440705 ZNF618Q5T7W0 954 aa21.75■■□□□ 1.07
VRK2-207ENST00000440705 VPS36Q86VN1 386 aa21.75■■□□□ 1.07
VRK2-207ENST00000440705 KAT5Q92993 513 aa21.75■■□□□ 1.07
VRK2-207ENST00000440705 TSPAN18Q96SJ8 248 aa21.75■■□□□ 1.07
VRK2-207ENST00000440705 NXF3Q9H4D5 531 aaKnown RBP21.75■■□□□ 1.07
VRK2-207ENST00000440705 PNMA6AP0CW24 399 aaPredicted RBP21.74■■□□□ 1.07
VRK2-207ENST00000440705 CKBP12277 381 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 ZSCAN20P17040 1043 aaPredicted RBP21.74■■□□□ 1.07
VRK2-207ENST00000440705 PAK2Q13177 524 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 PTPN14Q15678 1187 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 FAM71AQ8IYT1 594 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 TAF4BQ92750 862 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 SNX27Q96L92 541 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 AGO3Q9H9G7 860 aaKnown RBP21.74■■□□□ 1.07
VRK2-207ENST00000440705 ERVK-5Q9HDB9 667 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 PADI3Q9ULW8 664 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 HES2Q9Y543 173 aa21.74■■□□□ 1.07
VRK2-207ENST00000440705 RALGAPA2Q2PPJ7 1873 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 RECQL4O94761 1208 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 MYL6P60660 151 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 SLC18A3Q16572 532 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 ALKAL1Q6UXT8 129 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 NYAP1Q6ZVC0 841 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 CAGE1Q8TC20 777 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 KIF12Q96FN5 646 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 C16orf45Q96MC5 204 aaPredicted RBP21.73■■□□□ 1.07
VRK2-207ENST00000440705 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.73■■□□□ 1.07
VRK2-207ENST00000440705 APOBEC3GQ9HC16 384 aaKnown RBP21.73■■□□□ 1.07
VRK2-207ENST00000440705 REXO2Q9Y3B8 237 aaKnown RBP21.73■■□□□ 1.07
VRK2-207ENST00000440705 R3HCC1Q9Y3T6 440 aaKnown RBP21.73■■□□□ 1.07
VRK2-207ENST00000440705 IPPQ9Y573 584 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 DNAH12Q6ZR08 3092 aa21.73■■□□□ 1.07
VRK2-207ENST00000440705 RBAK-RBAKDNI3L0D1 243 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 CLSTN1O94985 981 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 TUBB4AP04350 444 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 GHRP10912 638 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 USP8P40818 1118 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 CUL2Q13617 745 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 LPIN1Q14693 890 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 SPOPLQ6IQ16 392 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 ZNF571Q7Z3V5 609 aaPredicted RBP21.72■■□□□ 1.07
VRK2-207ENST00000440705 HACE1Q8IYU2 909 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 C1orf127Q8N9H9 656 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 ZNF333Q96JL9 665 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 CRISPLD2Q9H0B8 497 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 LUC7LQ9NQ29 371 aaKnown RBP21.72■■□□□ 1.07
VRK2-207ENST00000440705 CNTN3Q9P232 1028 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 ADAMTS1Q9UHI8 967 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 ITGA11Q9UKX5 1188 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 KIF2AO00139 706 aaPredicted RBP21.72■■□□□ 1.07
VRK2-207ENST00000440705 KRT19P08727 400 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 CD52P31358 61 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 ATICP31939 592 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 ZNF699Q32M78 642 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 DNTTIP2Q5QJE6 756 aaKnown RBP21.72■■□□□ 1.07
VRK2-207ENST00000440705 SMYD5Q6GMV2 418 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 KIAA1328Q86T90 577 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 TXLNBQ8N3L3 684 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 SMG8Q8ND04 991 aaKnown RBP21.72■■□□□ 1.07
VRK2-207ENST00000440705 ELMO3Q96BJ8 720 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 FAXDC2Q96IV6 333 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 APOL6Q9BWW8 343 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 DPP3Q9NY33 737 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 PARP2Q9UGN5 583 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 SIX4Q9UIU6 781 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 NUB1Q9Y5A7 615 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 PCDHB2Q9Y5E7 798 aa21.72■■□□□ 1.07
VRK2-207ENST00000440705 SGPL1O95470 568 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 TFRCP02786 760 aaKnown RBP21.71■■□□□ 1.07
VRK2-207ENST00000440705 AKAP5P24588 427 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 CYP27A1Q02318 531 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 GFPT1Q06210 699 aaPredicted RBP21.71■■□□□ 1.07
VRK2-207ENST00000440705 BMS1Q14692 1282 aaKnown RBP21.71■■□□□ 1.07
VRK2-207ENST00000440705 ARHGAP29Q52LW3 1261 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 ZNF662Q6ZS27 426 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 FAM126BQ8IXS8 530 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 TRAIPQ9BWF2 469 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 IFIH1Q9BYX4 1025 aaKnown RBP21.71■■□□□ 1.07
VRK2-207ENST00000440705 XYLT2Q9H1B5 865 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 FAM105AQ9NUU6 356 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 PCDHA13Q9Y5I0 950 aa21.71■■□□□ 1.07
VRK2-207ENST00000440705 ZNF263O14978 683 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 ITGB3P05106 788 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 RBP5P82980 135 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 BFSP2Q13515 415 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 ZBTB6Q15916 424 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 XKR4Q5GH76 650 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 ARMC5Q96C12 935 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 NIF3L1Q9GZT8 377 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 LZTFL1Q9NQ48 299 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 TRIP11Q15643 1979 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 CEP350Q5VT06 3117 aa21.7■■□□□ 1.06
VRK2-207ENST00000440705 A0A087X0T9 212 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 CYP26A1O43174 497 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 XPOTO43592 962 aaKnown RBP21.69■■□□□ 1.06
VRK2-207ENST00000440705 FAM228BP0C875 321 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 TNNT1P13805 278 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 MAGEA1P43355 309 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 CTCFP49711 727 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms