RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 SNX27Q96L92 541 aa19.52■□□□□ 0.72
IRF3-203ENST00000377139 TSPAN18Q96SJ8 248 aa19.52■□□□□ 0.72
IRF3-203ENST00000377139 TSGA10Q9BZW7 698 aa19.52■□□□□ 0.72
IRF3-203ENST00000377139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.52■□□□□ 0.723e-7■■■■■ 53.4
IRF3-203ENST00000377139 SNTG2Q9NY99 539 aa19.52■□□□□ 0.72
IRF3-203ENST00000377139 SQORQ9Y6N5 450 aa19.52■□□□□ 0.72
IRF3-203ENST00000377139 ARVCFO00192 962 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 MEFVO15553 781 aaPredicted RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 KRT86O43790 486 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 GFPT1Q06210 699 aaPredicted RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 CUL2Q13617 745 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 TRIM71Q2Q1W2 868 aaKnown RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 UBXN11Q5T124 520 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 TWF2Q6IBS0 349 aaKnown RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 USP38Q8NB14 1042 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 DHX38Q92620 1227 aaKnown RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 FAXDC2Q96IV6 333 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 LZTFL1Q9NQ48 299 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 ADAMTS1Q9UHI8 967 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 ST3GAL5Q9UNP4 418 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 PCDHA13Q9Y5I0 950 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 ZNF263O14978 683 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 CLSTN1O94985 981 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 CST3P01034 146 aaPredicted RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 CCL5P13501 91 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 MYL6P60660 151 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 ETF1P62495 437 aaKnown RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 CYP27A1Q02318 531 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 FBXO47Q5MNV8 452 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 DEFB118Q96PH6 123 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 RNF208Q9H0X6 261 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 NXF3Q9H4D5 531 aaKnown RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 ITGA11Q9UKX5 1188 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 OGDHLQ9ULD0 1010 aa19.51■□□□□ 0.71
IRF3-203ENST00000377139 R3HCC1Q9Y3T6 440 aaKnown RBP19.51■□□□□ 0.71
IRF3-203ENST00000377139 ATP8B3O60423 1300 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 A0A087X0T9 212 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 RECQL4O94761 1208 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 FAM228BP0C875 321 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 ATICP31939 592 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 USP8P40818 1118 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 MAGEA1P43355 309 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 KIF5AQ12840 1032 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 NFX1Q12986 1120 aaKnown RBP19.5■□□□□ 0.71
IRF3-203ENST00000377139 MTFR1Q15390 333 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 ZNF699Q32M78 642 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 SPOPLQ6IQ16 392 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 HACE1Q8IYU2 909 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 C1orf127Q8N9H9 656 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 KIF12Q96FN5 646 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 NIF3L1Q9GZT8 377 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 APOBEC3GQ9HC16 384 aaKnown RBP19.5■□□□□ 0.71
IRF3-203ENST00000377139 CNTN3Q9P232 1028 aa19.5■□□□□ 0.71
IRF3-203ENST00000377139 KIF5CO60282 957 aa19.49■□□□□ 0.71
IRF3-203ENST00000377139 ARHGAP25P42331 645 aa19.49■□□□□ 0.71
IRF3-203ENST00000377139 CCDC122Q5T0U0 273 aa19.49■□□□□ 0.71
IRF3-203ENST00000377139 SYT11Q9BT88 431 aa19.49■□□□□ 0.71
IRF3-203ENST00000377139 ERVK-5Q9HDB9 667 aa19.49■□□□□ 0.71
IRF3-203ENST00000377139 MYO1AQ9UBC5 1043 aa19.49■□□□□ 0.71
IRF3-203ENST00000377139 IPPQ9Y573 584 aa19.49■□□□□ 0.71
IRF3-203ENST00000377139 NUB1Q9Y5A7 615 aa19.49■□□□□ 0.71
IRF3-203ENST00000377139 PDCD11Q14690 1871 aaKnown RBP19.48■□□□□ 0.71
IRF3-203ENST00000377139 XPOTO43592 962 aaKnown RBP19.48■□□□□ 0.71
IRF3-203ENST00000377139 ITGB3P05106 788 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 KRT19P08727 400 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 ZSCAN20P17040 1043 aaPredicted RBP19.48■□□□□ 0.71
IRF3-203ENST00000377139 PDE6CP51160 858 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 BPIFB4P59827 614 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 PAK2Q13177 524 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 ALKAL1Q6UXT8 129 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 CTU1Q7Z7A3 348 aaKnown RBP19.48■□□□□ 0.71
IRF3-203ENST00000377139 DNAJC5GQ8N7S2 189 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 CAGE1Q8TC20 777 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 XYLT2Q9H1B5 865 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 VRTNQ9H8Y1 702 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 SIX4Q9UIU6 781 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 NAGPAQ9UK23 515 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 HES2Q9Y543 173 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 HTTP42858 3142 aa19.48■□□□□ 0.71
IRF3-203ENST00000377139 A0A0U1RQJ8 604 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 PJA2O43164 708 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 CYP26A1O43174 497 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 GHRP10912 638 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 CKBP12277 381 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 KRT5P13647 590 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 TNFAIP3P21580 790 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 CDK7P50613 346 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 YWHAEP62258 255 aaKnown RBP19.47■□□□□ 0.71
IRF3-203ENST00000377139 NAB2Q15742 525 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 ZNF618Q5T7W0 954 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 BEST2Q8NFU1 509 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 KIF18AQ8NI77 898 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 EPS8L1Q8TE68 723 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 ATRIPQ8WXE1 791 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 ARID3AQ99856 593 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 AGPAT1Q99943 283 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 TRPV6Q9H1D0 765 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 AGO3Q9H9G7 860 aaKnown RBP19.47■□□□□ 0.71
IRF3-203ENST00000377139 DPP3Q9NY33 737 aa19.47■□□□□ 0.71
IRF3-203ENST00000377139 PARP2Q9UGN5 583 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms