RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 TSNAXIP1Q2TAA8 658 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 SPTY2D1Q68D10 685 aaPredicted RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 CTTNBP2NLQ9P2B4 639 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 STOML1Q9UBI4 398 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 ZNF510Q9Y2H8 683 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 KDM3AQ9Y4C1 1321 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 NRAPQ86VF7 1730 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 MAGEA13PA6NCF6 341 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 THAP12O43422 761 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 SORBS3O60504 671 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 IMPDH2P12268 514 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 SLC18A1P54219 525 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 CDR2Q01850 454 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 ELMO3Q96BJ8 720 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 METTL14Q9HCE5 456 aaKnown RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 PRDM11Q9NQV5 511 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 PICK1Q9NRD5 415 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 LRRC4BQ9NT99 713 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 ZFP69BQ9UJL9 534 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 TISP43B9A030 160 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 E5RJQ4 531 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 FDX1P10109 184 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 IL9RQ01113 521 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 ITPK1Q13572 414 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 SF3B3Q15393 1217 aaKnown RBP12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 DUS1LQ6P1R4 473 aaKnown RBP12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 RFX8Q6ZV50 586 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 SMIM5Q71RC9 77 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 EPS8L1Q8TE68 723 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 WNT8AQ9H1J5 351 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 PCDHGB4Q9UN71 923 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 PCDHGB5Q9Y5G0 923 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 UMODL1Q5DID0 1318 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 EML1O00423 815 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 DCTN3O75935 186 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 GPC5P78333 572 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 FMO1Q01740 532 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 EFTUD2Q15029 972 aaKnown RBP eCLIP12.4□□□□□ -0.421e-8■■■■■ 27.2
SMARCA1-201ENST00000371121 HP1BP3Q5SSJ5 553 aaPredicted RBP12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 NSMFQ6X4W1 530 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 PPP1R21Q6ZMI0 780 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 SLC47A2Q86VL8 602 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 SESTD1Q86VW0 696 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 UBL4BQ8N7F7 174 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 PANX3Q96QZ0 392 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 DCLK3Q9C098 648 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 FAM192AQ9GZU8 254 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 SAR1AQ9NR31 198 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 SIPA1L1O43166 1804 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 CYP3A7-CYP3A51PA0A087WV96 503 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 USP1O94782 785 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 PENKP01210 267 aaPredicted RBP12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 CYP1A2P05177 515 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 TNFAIP3P21580 790 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 CYP3A7P24462 503 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 VPS41P49754 854 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 NR1H3Q13133 447 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 MSLNQ13421 630 aaPredicted RBP12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 LIN52Q52LA3 116 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 FAM186BQ8IYM0 893 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 ZNF444Q8N0Y2 327 aaPredicted RBP12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 CLPTM1LQ96KA5 538 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 GALNT8Q9NY28 637 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 VAV3Q9UKW4 847 aa12.4□□□□□ -0.42
SMARCA1-201ENST00000371121 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 CALUO43852 315 aaPredicted RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 BANF1O75531 89 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 DLDP09622 509 aaKnown RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 FAM86B2P0C5J1 330 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 RARBP10826 455 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 TAL1P17542 331 aaPredicted RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 GAD2Q05329 585 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 PPP3CAQ08209 521 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 HHATQ5VTY9 493 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 RAPH1Q70E73 1250 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 OPTNQ96CV9 577 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 ASCC2Q9H1I8 757 aaPredicted RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 EBF3Q9H4W6 596 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 WRAP73Q9P2S5 460 aaPredicted RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 PPM1HQ9ULR3 514 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 ADRA1DP25100 572 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 HIBADHP31937 336 aaKnown RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 SLC16A2P36021 539 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 LMNB2Q03252 620 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 SETDB1Q15047 1291 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 NFIL3Q16649 462 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 TREML1Q86YW5 311 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 RBM12BQ8IXT5 1001 aaKnown RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 CYP2W1Q8TAV3 490 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 DDX1Q92499 740 aaKnown RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 KREMEN1Q96MU8 473 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 POLR3CQ9BUI4 534 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms