RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W YOL019WQ08157 551 aa1.91□□□□□ -2.1
UBP16YPL072W YOR186WQ08560 144 aa1.91□□□□□ -2.1
UBP16YPL072W YPR011CQ12251 326 aa1.91□□□□□ -2.1
UBP16YPL072W SMT3Q12306 101 aaKnown RBP1.91□□□□□ -2.1
UBP16YPL072W XRN1P22147 1528 aaKnown RBP1.91□□□□□ -2.1
UBP16YPL072W RAD9P14737 1309 aa1.91□□□□□ -2.1
UBP16YPL072W JIP3O13555 125 aa1.91□□□□□ -2.1
UBP16YPL072W COX5AP00424 153 aa1.91□□□□□ -2.1
UBP16YPL072W SNA3P14359 133 aa1.91□□□□□ -2.1
UBP16YPL072W RNP1P32385 249 aa1.91□□□□□ -2.1
UBP16YPL072W AST1P35183 429 aa1.91□□□□□ -2.1
UBP16YPL072W TRM5P38793 499 aa1.91□□□□□ -2.1
UBP16YPL072W SUR2P38992 349 aa1.91□□□□□ -2.1
UBP16YPL072W BUD13P46947 266 aaPredicted RBP1.91□□□□□ -2.1
UBP16YPL072W MGA1P53050 456 aa1.91□□□□□ -2.1
UBP16YPL072W BRR6P53062 197 aa1.91□□□□□ -2.1
UBP16YPL072W ALG13P53178 202 aa1.91□□□□□ -2.1
UBP16YPL072W HOP2P53187 214 aa1.91□□□□□ -2.1
UBP16YPL072W YPR172WQ06608 200 aa1.91□□□□□ -2.1
UBP16YPL072W YPL264CQ08980 353 aa1.91□□□□□ -2.1
UBP16YPL072W YPR063CQ12160 140 aa1.91□□□□□ -2.1
UBP16YPL072W YDR157WA0A023PZE8 133 aa1.9□□□□□ -2.11
UBP16YPL072W IKI1P38874 309 aa1.9□□□□□ -2.11
UBP16YPL072W YIL059CP40520 121 aa1.9□□□□□ -2.11
UBP16YPL072W IRC18P47056 224 aa1.9□□□□□ -2.11
UBP16YPL072W MIG2P53035 382 aa1.9□□□□□ -2.11
UBP16YPL072W YDR114CQ04597 100 aa1.9□□□□□ -2.11
UBP16YPL072W ABP140Q08641 628 aaKnown RBP1.9□□□□□ -2.11
UBP16YPL072W PRR2Q12310 699 aa1.9□□□□□ -2.11
UBP16YPL072W HSL1P34244 1518 aa1.89□□□□□ -2.11
UBP16YPL072W SWI1P09547 1314 aa1.89□□□□□ -2.11
UBP16YPL072W COS2P0CX12 379 aa1.89□□□□□ -2.11
UBP16YPL072W COS3P0CX13 379 aa1.89□□□□□ -2.11
UBP16YPL072W PRX1P34227 261 aaKnown RBP1.89□□□□□ -2.11
UBP16YPL072W YER189WP40104 122 aa1.89□□□□□ -2.11
UBP16YPL072W COS4P43542 379 aa1.89□□□□□ -2.11
UBP16YPL072W YJR149WP47177 404 aa1.89□□□□□ -2.11
UBP16YPL072W YNL046WP53956 172 aa1.89□□□□□ -2.11
UBP16YPL072W EMI1Q04406 187 aa1.89□□□□□ -2.11
UBP16YPL072W YLR179CQ06252 201 aaKnown RBP1.89□□□□□ -2.11
UBP16YPL072W TPO4Q12256 659 aa1.89□□□□□ -2.11
UBP16YPL072W TY1B-DR4Q07793 1604 aa1.89□□□□□ -2.11
UBP16YPL072W ERD2P18414 219 aa1.88□□□□□ -2.11
UBP16YPL072W SEC22P22214 214 aa1.88□□□□□ -2.11
UBP16YPL072W RAD51P25454 400 aa1.88□□□□□ -2.11
UBP16YPL072W RFA3P26755 122 aaKnown RBP1.88□□□□□ -2.11
UBP16YPL072W TKL2P33315 681 aa1.88□□□□□ -2.11
UBP16YPL072W TAF14P35189 244 aa1.88□□□□□ -2.11
UBP16YPL072W ECM13P38195 257 aa1.88□□□□□ -2.11
UBP16YPL072W YGP1P38616 354 aaKnown RBP1.88□□□□□ -2.11
UBP16YPL072W YFR045WP43617 309 aa1.88□□□□□ -2.11
UBP16YPL072W BXI1P48558 297 aa1.88□□□□□ -2.11
UBP16YPL072W RMR1P53060 241 aa1.88□□□□□ -2.11
UBP16YPL072W YMD8Q03697 442 aa1.88□□□□□ -2.11
UBP16YPL072W YPL257WQ08974 193 aa1.88□□□□□ -2.11
UBP16YPL072W TIM22Q12328 207 aa1.88□□□□□ -2.11
UBP16YPL072W MRX4Q12467 430 aa1.88□□□□□ -2.11
UBP16YPL072W LSO2Q3E772 92 aaKnown RBP1.88□□□□□ -2.11
UBP16YPL072W YBL112CQ3E7Y4 105 aa1.88□□□□□ -2.11
UBP16YPL072W HTL1Q9URQ5 78 aa1.88□□□□□ -2.11
UBP16YPL072W SWR1Q05471 1514 aa1.88□□□□□ -2.11
UBP16YPL072W SKI3P17883 1432 aaKnown RBP1.88□□□□□ -2.11
UBP16YPL072W ECM5Q03214 1411 aa1.88□□□□□ -2.11
UBP16YPL072W HIR3P47171 1648 aa1.88□□□□□ -2.11
UBP16YPL072W YLR462WO13556 202 aa1.87□□□□□ -2.11
UBP16YPL072W ASF2P32448 525 aaPredicted RBP1.87□□□□□ -2.11
UBP16YPL072W YPT52P36018 234 aaKnown RBP1.87□□□□□ -2.11
UBP16YPL072W YEL075CP39972 122 aa1.87□□□□□ -2.11
UBP16YPL072W YIL001WP40560 513 aa1.87□□□□□ -2.11
UBP16YPL072W CAT5P41735 233 aa1.87□□□□□ -2.11
UBP16YPL072W YJL016WP47072 561 aa1.87□□□□□ -2.11
UBP16YPL072W YGL034CP53186 121 aa1.87□□□□□ -2.11
UBP16YPL072W YDR248CQ03786 193 aa1.87□□□□□ -2.11
UBP16YPL072W YML096WQ04489 525 aa1.87□□□□□ -2.11
UBP16YPL072W YDR222WQ04925 415 aa1.87□□□□□ -2.11
UBP16YPL072W FAR8Q05040 523 aa1.87□□□□□ -2.11
UBP16YPL072W GPM2Q12008 311 aa1.87□□□□□ -2.11
UBP16YPL072W BBP1Q12365 385 aa1.87□□□□□ -2.11
UBP16YPL072W YOR020W-AQ3E824 90 aa1.87□□□□□ -2.11
UBP16YPL072W MON2P48563 1636 aaPredicted RBP1.87□□□□□ -2.11
UBP16YPL072W TUS1Q06412 1307 aa1.87□□□□□ -2.11
UBP16YPL072W CDC28P00546 298 aaKnown RBP1.86□□□□□ -2.11
UBP16YPL072W ADH3P07246 375 aaKnown RBP1.86□□□□□ -2.11
UBP16YPL072W ZWF1P11412 505 aaKnown RBP1.86□□□□□ -2.11
UBP16YPL072W KSS1P14681 368 aa1.86□□□□□ -2.11
UBP16YPL072W DBF2P22204 572 aa1.86□□□□□ -2.11
UBP16YPL072W ERG24P32462 438 aaKnown RBP1.86□□□□□ -2.11
UBP16YPL072W YCR087C-AP37263 153 aa1.86□□□□□ -2.11
UBP16YPL072W COS8P38723 381 aa1.86□□□□□ -2.11
UBP16YPL072W BMT5P40493 336 aa1.86□□□□□ -2.11
UBP16YPL072W YGL159WP53110 370 aa1.86□□□□□ -2.11
UBP16YPL072W NOP19P53317 196 aaPredicted RBP1.86□□□□□ -2.11
UBP16YPL072W PDR17P53844 350 aa1.86□□□□□ -2.11
UBP16YPL072W ABF2Q02486 183 aa1.86□□□□□ -2.11
UBP16YPL072W INM2Q05533 292 aa1.86□□□□□ -2.11
UBP16YPL072W MDM32Q12171 622 aa1.86□□□□□ -2.11
UBP16YPL072W GEP5Q12393 293 aa1.86□□□□□ -2.11
UBP16YPL072W YPL247CQ12523 523 aa1.86□□□□□ -2.11
UBP16YPL072W DNA2P38859 1522 aa1.86□□□□□ -2.11
UBP16YPL072W QCR7P00128 127 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms