RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	USB1	Q12208	290 aa	Known RBP	4.62	□□□□□ -1.67
ULA1	YPL003W	MCT1	Q12283	360 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	SEC16	P48415	2195 aa	Known RBP	4.61	□□□□□ -1.67
ULA1	YPL003W	RPL30	P14120	105 aa	Known RBP	4.61	□□□□□ -1.67
ULA1	YPL003W	STF2	P16965	84 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	GRX2	P17695	143 aa	Known RBP	4.61	□□□□□ -1.67
ULA1	YPL003W	RRF1	P38771	230 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	VMA22	P38784	181 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	OTU1	P43558	301 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	TNA1	P53322	534 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	MEH1	Q02205	184 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	PLP1	Q04004	230 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	RAF1	Q06891	181 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	TRM13	Q12383	476 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	IZH2	Q12442	317 aa		4.61	□□□□□ -1.67
ULA1	YPL003W	CDC39	P25655	2108 aa	Known RBP	4.61	□□□□□ -1.67
ULA1	YPL003W	ARG80	P07249	177 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	IFM1	P25038	676 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	CPR4	P25334	318 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	VMA5	P31412	392 aa	Known RBP	4.6	□□□□□ -1.67
ULA1	YPL003W	FLO10	P36170	1169 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	MRPL27	P36526	146 aa	Predicted RBP	4.6	□□□□□ -1.67
ULA1	YPL003W	APL3	P38065	1025 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	GZF3	P42944	551 aa	Known RBP	4.6	□□□□□ -1.67
ULA1	YPL003W	GNA1	P43577	159 aa	Predicted RBP	4.6	□□□□□ -1.67
ULA1	YPL003W	CIN2	P46670	268 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	YJR096W	P47137	282 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	PHB2	P50085	310 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	GTF1	P53260	183 aa	Predicted RBP	4.6	□□□□□ -1.67
ULA1	YPL003W	ARG5,6	Q01217	863 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	RPL6A	Q02326	176 aa	Known RBP	4.6	□□□□□ -1.67
ULA1	YPL003W	NGL2	Q03264	515 aa	Known RBP	4.6	□□□□□ -1.67
ULA1	YPL003W	RCE1	Q03530	315 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	VBA1	Q04301	562 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	MRX9	Q07349	420 aa	Known RBP	4.6	□□□□□ -1.67
ULA1	YPL003W	TMS1	Q12116	473 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	YDR215C	Q12240	137 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	PRM4	Q12498	284 aa		4.6	□□□□□ -1.67
ULA1	YPL003W	SPS4	P09937	338 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	DSF1	P0CX08	502 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	YNR073C	P0CX09	502 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	ERS1	P17261	260 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	HNM1	P19807	563 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	PCL1	P24867	279 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	MRP17	P28778	131 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	ARO4	P32449	370 aa	Known RBP	4.59	□□□□□ -1.67
ULA1	YPL003W	MTC7	P32633	139 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	YBL010C	P32788	280 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	ALG14	P38242	237 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	SWM2	P40342	146 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	XBP1	P40489	647 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	MOB2	P43563	287 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	SMX3	P54999	86 aa	Predicted RBP	4.59	□□□□□ -1.67
ULA1	YPL003W	YDR391C	Q04170	232 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	YLR352W	Q06479	807 aa		4.59	□□□□□ -1.67
ULA1	YPL003W	CDC28	P00546	298 aa	Known RBP	4.58	□□□□□ -1.68
ULA1	YPL003W	PHO2	P07269	559 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	RPL35A	P0CX84	120 aa	Known RBP	4.58	□□□□□ -1.68
ULA1	YPL003W	RPL35B	P0CX85	120 aa	Known RBP	4.58	□□□□□ -1.68
ULA1	YPL003W	YCR101C	P25607	182 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	DEG1	P31115	442 aa	Known RBP	4.58	□□□□□ -1.68
ULA1	YPL003W	VAM7	P32912	316 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	AFR1	P33304	620 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	YKL063C	P35725	167 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	YMR262W	P38430	313 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	MTC6	P38849	526 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	NSA1	P53136	463 aa	Predicted RBP	4.58	□□□□□ -1.68
ULA1	YPL003W	YML018C	Q03730	393 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	YDL218W	Q07629	317 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	RFU1	Q08003	200 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	YNG1	Q08465	219 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	PET20	Q99373	253 aa		4.58	□□□□□ -1.68
ULA1	YPL003W	AAC1	P04710	309 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	HEM4	P06174	275 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	PUT1	P09368	476 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	ARO3	P14843	370 aa	Known RBP	4.57	□□□□□ -1.68
ULA1	YPL003W	RFA1	P22336	621 aa	Known RBP	4.57	□□□□□ -1.68
ULA1	YPL003W	YCR016W	P25617	290 aa	Known RBP	4.57	□□□□□ -1.68
ULA1	YPL003W	ACB1	P31787	87 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	REC114	P32841	428 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	MRPS5	P33759	307 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	PAN3	P36102	679 aa	Predicted RBP	4.57	□□□□□ -1.68
ULA1	YPL003W	ARO9	P38840	513 aa	Predicted RBP	4.57	□□□□□ -1.68
ULA1	YPL003W	YND1	P40009	630 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	ECM27	P47144	725 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	YGL260W	P53056	76 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	ORM1	P53224	222 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	PRM15	Q03262	622 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	YDR248C	Q03786	193 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	YLR224W	Q05947	369 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	ATG33	Q06485	197 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	RTR2	Q12378	196 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	ERP4	Q12450	207 aa		4.57	□□□□□ -1.68
ULA1	YPL003W	RPL25	P04456	142 aa	Known RBP	4.56	□□□□□ -1.68
ULA1	YPL003W	PET122	P10355	254 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	ERG3	P32353	365 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	FMT1	P32785	401 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	MCH2	P36032	473 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	MRPL36	P36531	177 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	YPC1	P38298	316 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 96 ms