RNA–Protein interactions for RNA: YOR207C

RET1, Transcript of Second-largest subunit of RNA polymerase III, yeast

Gene RET1, Length 3,450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET1	YOR207C	PMT3	P47190	753 aa		4.93	□□□□□ -1.62
RET1	YOR207C	HDA2	Q06629	674 aa		4.93	□□□□□ -1.62
RET1	YOR207C	IRA1	P18963	3092 aa		4.93	□□□□□ -1.62
RET1	YOR207C	QCR7	P00128	127 aa		4.93	□□□□□ -1.62
RET1	YOR207C	RPL1A	P0CX43	217 aa	Known RBP	4.93	□□□□□ -1.62
RET1	YOR207C	RPL1B	P0CX44	217 aa	Known RBP	4.93	□□□□□ -1.62
RET1	YOR207C	NPR1	P22211	790 aa		4.93	□□□□□ -1.62
RET1	YOR207C	PEX28	P38848	579 aa		4.93	□□□□□ -1.62
RET1	YOR207C	MNL1	P38888	796 aa		4.93	□□□□□ -1.62
RET1	YOR207C	YGL204C	P53089	101 aa		4.93	□□□□□ -1.62
RET1	YOR207C	CAB5	Q03941	241 aa		4.93	□□□□□ -1.62
RET1	YOR207C	CDC28	P00546	298 aa	Known RBP	4.93	□□□□□ -1.62
RET1	YOR207C	SLC1	P33333	303 aa		4.93	□□□□□ -1.62
RET1	YOR207C	CPR5	P35176	225 aa		4.93	□□□□□ -1.62
RET1	YOR207C	ECM15	P35195	104 aa		4.93	□□□□□ -1.62
RET1	YOR207C	AVT7	P40501	490 aa		4.93	□□□□□ -1.62
RET1	YOR207C	SYS1	P41544	203 aa		4.93	□□□□□ -1.62
RET1	YOR207C	OGG1	P53397	376 aa	Predicted RBP	4.93	□□□□□ -1.62
RET1	YOR207C	YPD1	Q07688	167 aa		4.93	□□□□□ -1.62
RET1	YOR207C	DET1	Q99288	334 aa	Known RBP	4.93	□□□□□ -1.62
RET1	YOR207C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
RET1	YOR207C	CDC7	P06243	507 aa		4.92	□□□□□ -1.62
RET1	YOR207C	ERG3	P32353	365 aa		4.92	□□□□□ -1.62
RET1	YOR207C	HOG1	P32485	435 aa		4.92	□□□□□ -1.62
RET1	YOR207C	ALK2	P32789	676 aa	Predicted RBP	4.92	□□□□□ -1.62
RET1	YOR207C	SSH1	P38353	490 aa	Known RBP	4.92	□□□□□ -1.62
RET1	YOR207C	ELO1	P39540	310 aa		4.92	□□□□□ -1.62
RET1	YOR207C	AGE2	P40529	298 aa		4.92	□□□□□ -1.62
RET1	YOR207C	PAU15	P40585	124 aa		4.92	□□□□□ -1.62
RET1	YOR207C	HIT1	P46973	164 aa		4.92	□□□□□ -1.62
RET1	YOR207C	RSM7	P47150	247 aa		4.92	□□□□□ -1.62
RET1	YOR207C	ACS2	P52910	683 aa	Known RBP	4.92	□□□□□ -1.62
RET1	YOR207C	UFD1	P53044	361 aa		4.92	□□□□□ -1.62
RET1	YOR207C	RSM23	Q01163	450 aa		4.92	□□□□□ -1.62
RET1	YOR207C	FDH1	Q08911	376 aa		4.92	□□□□□ -1.62
RET1	YOR207C	PPA2	P28239	310 aa		4.92	□□□□□ -1.62
RET1	YOR207C	LSB3	P43603	459 aa	Known RBP	4.92	□□□□□ -1.62
RET1	YOR207C	CTR3	Q06686	241 aa		4.92	□□□□□ -1.62
RET1	YOR207C	BEM2	P39960	2167 aa	Known RBP	4.92	□□□□□ -1.62
RET1	YOR207C	RPL25	P04456	142 aa	Known RBP	4.92	□□□□□ -1.62
RET1	YOR207C	RPL20A	P0CX23	172 aa	Known RBP	4.92	□□□□□ -1.62
RET1	YOR207C	RPL20B	P0CX24	172 aa	Predicted RBP	4.92	□□□□□ -1.62
RET1	YOR207C	RPB5	P20434	215 aa		4.92	□□□□□ -1.62
RET1	YOR207C	SLY41	P22215	453 aa		4.92	□□□□□ -1.62
RET1	YOR207C	SPO13	P23624	291 aa		4.92	□□□□□ -1.62
RET1	YOR207C	YJU3	P28321	313 aa		4.92	□□□□□ -1.62
RET1	YOR207C	SUI1	P32911	108 aa	Known RBP	4.92	□□□□□ -1.62
RET1	YOR207C	PET191	Q02772	108 aa		4.92	□□□□□ -1.62
RET1	YOR207C	MRX8	Q05473	314 aa		4.92	□□□□□ -1.62
RET1	YOR207C	COA2	Q3E823	68 aa		4.92	□□□□□ -1.62
RET1	YOR207C	OPI3	P05375	206 aa		4.91	□□□□□ -1.62
RET1	YOR207C	COQ3	P27680	312 aa		4.91	□□□□□ -1.62
RET1	YOR207C	TRS65	P32893	560 aa		4.91	□□□□□ -1.62
RET1	YOR207C	UMP1	P38293	148 aa		4.91	□□□□□ -1.62
RET1	YOR207C	GIP2	P40036	548 aa		4.91	□□□□□ -1.62
RET1	YOR207C	NSA2	P40078	261 aa	Known RBP	4.91	□□□□□ -1.62
RET1	YOR207C	SNO2	P53823	222 aa		4.91	□□□□□ -1.62
RET1	YOR207C	FSH2	Q05015	223 aa		4.91	□□□□□ -1.62
RET1	YOR207C	YLR456W	Q06199	204 aa		4.91	□□□□□ -1.62
RET1	YOR207C	IZH3	Q07959	543 aa		4.91	□□□□□ -1.62
RET1	YOR207C	ATG5	Q12380	294 aa		4.91	□□□□□ -1.62
RET1	YOR207C	SET6	Q12529	373 aa		4.91	□□□□□ -1.62
RET1	YOR207C	YMR084W	A2P2R3	262 aa		4.91	□□□□□ -1.62
RET1	YOR207C	RFA1	P22336	621 aa	Known RBP	4.91	□□□□□ -1.62
RET1	YOR207C	SRB5	P32585	307 aa		4.91	□□□□□ -1.62
RET1	YOR207C	GLC7	P32598	312 aa	Known RBP	4.91	□□□□□ -1.62
RET1	YOR207C	MNS1	P32906	549 aa		4.91	□□□□□ -1.62
RET1	YOR207C	SMK1	P41808	388 aa		4.91	□□□□□ -1.62
RET1	YOR207C	TAF4	P50105	388 aa		4.91	□□□□□ -1.62
RET1	YOR207C	SNT309	Q06091	175 aa	Predicted RBP	4.91	□□□□□ -1.62
RET1	YOR207C	AHC1	Q12433	566 aa		4.91	□□□□□ -1.62
RET1	YOR207C	RPS9B	P05755	195 aa	Known RBP	4.91	□□□□□ -1.62
RET1	YOR207C	CPR4	P25334	318 aa		4.91	□□□□□ -1.62
RET1	YOR207C	CDC50	P25656	391 aa		4.91	□□□□□ -1.62
RET1	YOR207C	OAR1	P35731	278 aa		4.91	□□□□□ -1.62
RET1	YOR207C	IDP2	P41939	412 aa		4.91	□□□□□ -1.62
RET1	YOR207C	YGL262W	P53054	175 aa		4.91	□□□□□ -1.62
RET1	YOR207C	HOL1	P53389	586 aa		4.91	□□□□□ -1.62
RET1	YOR207C	SME1	Q12330	94 aa	Predicted RBP	4.91	□□□□□ -1.62
RET1	YOR207C	MTF1	P14908	341 aa	Known RBP	4.9	□□□□□ -1.62
RET1	YOR207C	YCR025C	P25352	136 aa		4.9	□□□□□ -1.62
RET1	YOR207C	DMA1	P38823	416 aa		4.9	□□□□□ -1.62
RET1	YOR207C	YER188W	P40103	239 aa		4.9	□□□□□ -1.62
RET1	YOR207C	RCE1	Q03530	315 aa		4.9	□□□□□ -1.62
RET1	YOR207C	ASM4	Q05166	528 aa		4.9	□□□□□ -1.62
RET1	YOR207C	CKA1	P15790	372 aa		4.9	□□□□□ -1.63
RET1	YOR207C	PTP1	P25044	335 aa		4.9	□□□□□ -1.63
RET1	YOR207C	EHD3	P28817	500 aa		4.9	□□□□□ -1.63
RET1	YOR207C	SMB1	P40018	196 aa	Known RBP	4.9	□□□□□ -1.63
RET1	YOR207C	GLC8	P41818	229 aa		4.9	□□□□□ -1.63
RET1	YOR207C	FLC3	P53121	802 aa		4.9	□□□□□ -1.63
RET1	YOR207C	AQR1	P53943	586 aa		4.9	□□□□□ -1.63
RET1	YOR207C	CCE1	Q03702	353 aa		4.9	□□□□□ -1.63
RET1	YOR207C	TSA2	Q04120	196 aa		4.9	□□□□□ -1.63
RET1	YOR207C	SHH3	Q04487	196 aa		4.9	□□□□□ -1.63
RET1	YOR207C	POM33	Q12164	279 aa		4.9	□□□□□ -1.63
RET1	YOR207C	SWM1	Q12379	170 aa		4.9	□□□□□ -1.63
RET1	YOR207C	CHO1	P08456	276 aa		4.89	□□□□□ -1.63
RET1	YOR207C	MEK1	P24719	497 aa	Predicted RBP	4.89	□□□□□ -1.63
RET1	YOR207C	DEG1	P31115	442 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms