RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	YGR054W	P53235	642 aa	Known RBP	8.04	□□□□□ -1.12
MSB4	YOL112W	YMR130W	Q04223	302 aa		8.04	□□□□□ -1.12
MSB4	YOL112W	YOR186W	Q08560	144 aa		8.04	□□□□□ -1.12
MSB4	YOL112W	SOG2	Q08817	791 aa		8.04	□□□□□ -1.12
MSB4	YOL112W	YOR283W	Q12040	230 aa	Known RBP	8.04	□□□□□ -1.12
MSB4	YOL112W	ERP4	Q12450	207 aa		8.04	□□□□□ -1.12
MSB4	YOL112W	ODC2	Q99297	307 aa		8.04	□□□□□ -1.12
MSB4	YOL112W	RPL25	P04456	142 aa	Known RBP	8.03	□□□□□ -1.12
MSB4	YOL112W	IMP1	P28627	190 aa		8.03	□□□□□ -1.12
MSB4	YOL112W	AGA2	P32781	87 aa		8.03	□□□□□ -1.12
MSB4	YOL112W	NAT2	P37293	288 aa		8.03	□□□□□ -1.12
MSB4	YOL112W	SLM1	P40485	686 aa		8.03	□□□□□ -1.12
MSB4	YOL112W	SER2	P42941	309 aa		8.03	□□□□□ -1.12
MSB4	YOL112W	CAC2	Q04199	468 aa		8.03	□□□□□ -1.12
MSB4	YOL112W	KEI1	Q06346	221 aa		8.03	□□□□□ -1.12
MSB4	YOL112W	YOR029W	Q12243	111 aa		8.03	□□□□□ -1.12
MSB4	YOL112W	RDL1	Q12305	139 aa	Known RBP	8.03	□□□□□ -1.12
MSB4	YOL112W	PEX4	P29340	183 aa		8.02	□□□□□ -1.13
MSB4	YOL112W	VMA5	P31412	392 aa	Known RBP	8.02	□□□□□ -1.13
MSB4	YOL112W	YHL044W	P38727	235 aa		8.02	□□□□□ -1.13
MSB4	YOL112W	GRC3	Q07845	632 aa		8.02	□□□□□ -1.13
MSB4	YOL112W	GCD1	P09032	578 aa	Predicted RBP	8.01	□□□□□ -1.13
MSB4	YOL112W	PET122	P10355	254 aa		8.01	□□□□□ -1.13
MSB4	YOL112W	IPI1	P38803	334 aa	Predicted RBP	8.01	□□□□□ -1.13
MSB4	YOL112W	HPA3	P39979	161 aa		8.01	□□□□□ -1.13
MSB4	YOL112W	FCY21	P40039	528 aa		8.01	□□□□□ -1.13
MSB4	YOL112W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	8.01	□□□□□ -1.13	not detected
MSB4	YOL112W	CAT5	P41735	233 aa		8.01	□□□□□ -1.13
MSB4	YOL112W	OTU1	P43558	301 aa		8.01	□□□□□ -1.13
MSB4	YOL112W	IRC18	P47056	224 aa		8.01	□□□□□ -1.13
MSB4	YOL112W	HNT1	Q04344	158 aa	Known RBP	8.01	□□□□□ -1.13
MSB4	YOL112W	YMR254C	Q04838	102 aa		8.01	□□□□□ -1.13
MSB4	YOL112W	CHO1	P08456	276 aa		8	□□□□□ -1.13
MSB4	YOL112W	PUP1	P25043	261 aa		8	□□□□□ -1.13
MSB4	YOL112W	FIG1	P38224	298 aa		8	□□□□□ -1.13
MSB4	YOL112W	MRX5	P47007	382 aa		8	□□□□□ -1.13
MSB4	YOL112W	GWT1	P47026	490 aa		8	□□□□□ -1.13
MSB4	YOL112W	TDH2	P00358	332 aa	Known RBP	8	□□□□□ -1.13
MSB4	YOL112W	SPS4	P09937	338 aa		8	□□□□□ -1.13
MSB4	YOL112W	YLL053C	P0CD98	152 aa		8	□□□□□ -1.13
MSB4	YOL112W	URA6	P15700	204 aa		8	□□□□□ -1.13
MSB4	YOL112W	YHR122W	P38829	231 aa		8	□□□□□ -1.13
MSB4	YOL112W	LNP1	P38878	278 aa		8	□□□□□ -1.13
MSB4	YOL112W	GEP7	P53171	287 aa		8	□□□□□ -1.13
MSB4	YOL112W	YPL067C	Q02754	198 aa		8	□□□□□ -1.13
MSB4	YOL112W	RGC1	Q06108	1083 aa	Known RBP	8	□□□□□ -1.13
MSB4	YOL112W	CSI2	Q08054	341 aa		8	□□□□□ -1.13
MSB4	YOL112W	YOR097C	Q12274	175 aa	Predicted RBP	8	□□□□□ -1.13
MSB4	YOL112W	YMR105W-A	Q8TGS8	64 aa		8	□□□□□ -1.13
MSB4	YOL112W	RPS31	P05759	152 aa	Known RBP	7.99	□□□□□ -1.13
MSB4	YOL112W	SPT14	P32363	452 aa		7.99	□□□□□ -1.13
MSB4	YOL112W	GNA1	P43577	159 aa	Predicted RBP	7.99	□□□□□ -1.13
MSB4	YOL112W	SMM1	P53720	384 aa	Known RBP	7.99	□□□□□ -1.13
MSB4	YOL112W	YNR064C	P53750	290 aa		7.99	□□□□□ -1.13
MSB4	YOL112W	PRM15	Q03262	622 aa		7.99	□□□□□ -1.13
MSB4	YOL112W	UTP15	Q04305	513 aa	Known RBP	7.99	□□□□□ -1.13
MSB4	YOL112W	RPL3	P14126	387 aa	Known RBP	7.98	□□□□□ -1.13
MSB4	YOL112W	RFA1	P22336	621 aa	Known RBP	7.98	□□□□□ -1.13
MSB4	YOL112W	VMA3	P25515	160 aa		7.98	□□□□□ -1.13
MSB4	YOL112W	RFA3	P26755	122 aa	Known RBP	7.98	□□□□□ -1.13
MSB4	YOL112W	RNP1	P32385	249 aa		7.98	□□□□□ -1.13
MSB4	YOL112W	SKP1	P52286	194 aa		7.98	□□□□□ -1.13
MSB4	YOL112W	ERG3	P32353	365 aa		7.97	□□□□□ -1.13
MSB4	YOL112W	ZUO1	P32527	433 aa	Known RBP	7.97	□□□□□ -1.13
MSB4	YOL112W	EDS1	P38073	919 aa		7.97	□□□□□ -1.13
MSB4	YOL112W	PRS2	P38620	318 aa	Known RBP	7.97	□□□□□ -1.13
MSB4	YOL112W	PIR5	P46999	287 aa		7.97	□□□□□ -1.13
MSB4	YOL112W	YHC3	P47040	408 aa		7.97	□□□□□ -1.13
MSB4	YOL112W	YPL199C	Q08954	240 aa		7.97	□□□□□ -1.13
MSB4	YOL112W	APA2	P22108	325 aa		7.96	□□□□□ -1.13
MSB4	YOL112W	OSH7	P38755	437 aa		7.96	□□□□□ -1.13
MSB4	YOL112W	IMD3	P50095	523 aa	Known RBP	7.96	□□□□□ -1.13
MSB4	YOL112W	UPS1	Q05776	175 aa		7.96	□□□□□ -1.13
MSB4	YOL112W	YLR031W	Q07978	186 aa		7.96	□□□□□ -1.13
MSB4	YOL112W	YOR192C-C	Q3E736	78 aa		7.96	□□□□□ -1.13
MSB4	YOL112W	CYC1	P00044	109 aa	Predicted RBP	7.95	□□□□□ -1.14
MSB4	YOL112W	AAC1	P04710	309 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	OCH1	P31755	480 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	VMA11	P32842	164 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	SWD3	P38123	315 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	CCS1	P40202	249 aa	Known RBP	7.95	□□□□□ -1.14
MSB4	YOL112W	HNT2	P49775	206 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	APJ1	P53940	528 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	RFM1	Q12192	310 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	YDL009C	Q12210	107 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	ATG40	Q99325	256 aa		7.95	□□□□□ -1.14
MSB4	YOL112W	YCR101C	P25607	182 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	MSS1	P32559	526 aa	Predicted RBP	7.94	□□□□□ -1.14
MSB4	YOL112W	GPI18	P38211	433 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	GZF3	P42944	551 aa	Known RBP	7.94	□□□□□ -1.14
MSB4	YOL112W	TY1A-MR1	Q04215	440 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	LIP2	Q06005	328 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	YOL118C	Q08259	102 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	WHI5	Q12416	295 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	IFM1	P25038	676 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	AIM46	P38885	310 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	XPT1	P47165	209 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	TPN1	P53099	579 aa		7.94	□□□□□ -1.14
MSB4	YOL112W	LSM7	P53905	115 aa	Known RBP	7.94	□□□□□ -1.14
MSB4	YOL112W	PHO92	Q06390	306 aa		7.94	□□□□□ -1.14

Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms