RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W TAF9Q05027 157 aa2.67□□□□□ -1.98
MSH2YOL090W SFM1Q12314 213 aa2.67□□□□□ -1.98
MSH2YOL090W RDI1Q12434 202 aa2.67□□□□□ -1.98
MSH2YOL090W RPS28AQ3E7X9 67 aaPredicted RBP2.67□□□□□ -1.98
MSH2YOL090W COX5AP00424 153 aa2.66□□□□□ -1.98
MSH2YOL090W CYC3P06182 269 aa2.66□□□□□ -1.98
MSH2YOL090W YKR104WP0CE69 306 aa2.66□□□□□ -1.98
MSH2YOL090W MDM10P18409 493 aa2.66□□□□□ -1.98
MSH2YOL090W OAC1P32332 324 aa2.66□□□□□ -1.98
MSH2YOL090W TIP20P33891 701 aa2.66□□□□□ -1.98
MSH2YOL090W UPS2P35200 230 aa2.66□□□□□ -1.98
MSH2YOL090W HOT13P36078 116 aa2.66□□□□□ -1.98
MSH2YOL090W YHL049CP38722 271 aa2.66□□□□□ -1.98
MSH2YOL090W YHR127WP38833 243 aaKnown RBP2.66□□□□□ -1.98
MSH2YOL090W MOG1P47123 218 aa2.66□□□□□ -1.98
MSH2YOL090W ABF2Q02486 183 aa2.66□□□□□ -1.98
MSH2YOL090W MSA1Q08471 629 aa2.66□□□□□ -1.98
MSH2YOL090W FLO1P32768 1537 aa2.66□□□□□ -1.98
MSH2YOL090W CDC28P00546 298 aaKnown RBP2.66□□□□□ -1.98
MSH2YOL090W KTI12P34253 313 aaKnown RBP2.66□□□□□ -1.98
MSH2YOL090W MIX23P38162 196 aa2.66□□□□□ -1.98
MSH2YOL090W BDH1P39714 382 aa2.66□□□□□ -1.98
MSH2YOL090W PAN6P40459 309 aa2.66□□□□□ -1.98
MSH2YOL090W SPG4Q04438 115 aa2.66□□□□□ -1.98
MSH2YOL090W MRS3P10566 314 aa2.65□□□□□ -1.98
MSH2YOL090W MRPL20P22354 195 aaPredicted RBP2.65□□□□□ -1.98
MSH2YOL090W MIR1P23641 311 aaKnown RBP2.65□□□□□ -1.98
MSH2YOL090W YCR023CP25351 611 aa2.65□□□□□ -1.98
MSH2YOL090W ALK2P32789 676 aaPredicted RBP2.65□□□□□ -1.98
MSH2YOL090W ARC40P38328 384 aaKnown RBP2.65□□□□□ -1.98
MSH2YOL090W SSH1P38353 490 aaKnown RBP2.65□□□□□ -1.98
MSH2YOL090W OXA1P39952 402 aa2.65□□□□□ -1.98
MSH2YOL090W COG5P53951 403 aa2.65□□□□□ -1.98
MSH2YOL090W CRZ1P53968 678 aa2.65□□□□□ -1.98
MSH2YOL090W YML018CQ03730 393 aa2.65□□□□□ -1.98
MSH2YOL090W YOL019WQ08157 551 aa2.65□□□□□ -1.98
MSH2YOL090W OSW1Q08692 278 aa2.65□□□□□ -1.98
MSH2YOL090W RPL4AP10664 362 aaKnown RBP2.65□□□□□ -1.99
MSH2YOL090W CTA1P15202 515 aa2.65□□□□□ -1.99
MSH2YOL090W TAH1P25638 111 aaPredicted RBP2.65□□□□□ -1.99
MSH2YOL090W AZF1P41696 914 aa2.65□□□□□ -1.99
MSH2YOL090W RPL4BP49626 362 aaKnown RBP2.65□□□□□ -1.99
MSH2YOL090W UBC12P52491 188 aa2.65□□□□□ -1.99
MSH2YOL090W YGL034CP53186 121 aa2.65□□□□□ -1.99
MSH2YOL090W RSC9Q03124 581 aa2.65□□□□□ -1.99
MSH2YOL090W RFU1Q08003 200 aa2.65□□□□□ -1.99
MSH2YOL090W PCL9Q12477 304 aa2.65□□□□□ -1.99
MSH2YOL090W SLM6P38343 150 aa2.64□□□□□ -1.99
MSH2YOL090W RRP3P38712 501 aaKnown RBP2.64□□□□□ -1.99
MSH2YOL090W RPL15BP54780 204 aaPredicted RBP2.64□□□□□ -1.99
MSH2YOL090W YPR091CQ06833 770 aa2.64□□□□□ -1.99
MSH2YOL090W YOL024WQ08172 172 aa2.64□□□□□ -1.99
MSH2YOL090W YLR050CQ12155 161 aaKnown RBP2.64□□□□□ -1.99
MSH2YOL090W GCN3P14741 305 aa2.64□□□□□ -1.99
MSH2YOL090W ERD2P18414 219 aa2.64□□□□□ -1.99
MSH2YOL090W URE2P23202 354 aaKnown RBP2.64□□□□□ -1.99
MSH2YOL090W MOH1P38191 138 aa2.64□□□□□ -1.99
MSH2YOL090W COX14P39103 70 aa2.64□□□□□ -1.99
MSH2YOL090W YIL067CP40514 678 aa2.64□□□□□ -1.99
MSH2YOL090W IRC24P40580 263 aa2.64□□□□□ -1.99
MSH2YOL090W BXI1P48558 297 aa2.64□□□□□ -1.99
MSH2YOL090W YNL046WP53956 172 aa2.64□□□□□ -1.99
MSH2YOL090W HSK3P69852 69 aa2.64□□□□□ -1.99
MSH2YOL090W TIM44Q01852 431 aa2.64□□□□□ -1.99
MSH2YOL090W YOR292CQ08743 309 aa2.64□□□□□ -1.99
MSH2YOL090W PIS1P06197 220 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W MCK1P21965 375 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W YCR090CP25654 182 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W MGT1P26188 188 aa2.63□□□□□ -1.99
MSH2YOL090W FLO5P38894 1075 aa2.63□□□□□ -1.99
MSH2YOL090W FMP41P53889 259 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W RAX2Q12465 1220 aa2.63□□□□□ -1.99
MSH2YOL090W RAD50P12753 1312 aa2.63□□□□□ -1.99
MSH2YOL090W RPN13O13563 156 aa2.63□□□□□ -1.99
MSH2YOL090W STE7P06784 515 aa2.63□□□□□ -1.99
MSH2YOL090W SEC4P07560 215 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W RPS18AP0CX55 146 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W RPS18BP0CX56 146 aaPredicted RBP2.63□□□□□ -1.99
MSH2YOL090W YER190C-BP0CX94 160 aa2.63□□□□□ -1.99
MSH2YOL090W YEL077W-AP0CX95 160 aa2.63□□□□□ -1.99
MSH2YOL090W YGR296C-BP0CX96 160 aa2.63□□□□□ -1.99
MSH2YOL090W YPL283W-BP0CX97 160 aa2.63□□□□□ -1.99
MSH2YOL090W YPR204C-AP0CX98 160 aa2.63□□□□□ -1.99
MSH2YOL090W SOL2P37262 315 aa2.63□□□□□ -1.99
MSH2YOL090W SHE3P38272 425 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W MTC4P38335 694 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W ECM14P38836 430 aa2.63□□□□□ -1.99
MSH2YOL090W PEX17P40155 199 aa2.63□□□□□ -1.99
MSH2YOL090W EGT2P42835 1041 aa2.63□□□□□ -1.99
MSH2YOL090W MOB2P43563 287 aa2.63□□□□□ -1.99
MSH2YOL090W YGL039WP53183 348 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W MPA43P53583 542 aaPredicted RBP2.63□□□□□ -1.99
MSH2YOL090W IGO2Q9P305 131 aa2.63□□□□□ -1.99
MSH2YOL090W COS2P0CX12 379 aa2.63□□□□□ -1.99
MSH2YOL090W COS3P0CX13 379 aa2.63□□□□□ -1.99
MSH2YOL090W MRP21P38175 177 aa2.63□□□□□ -1.99
MSH2YOL090W AVT7P40501 490 aa2.63□□□□□ -1.99
MSH2YOL090W NRM1P53718 249 aa2.63□□□□□ -1.99
MSH2YOL090W DYN3Q04949 312 aa2.63□□□□□ -1.99
MSH2YOL090W YOR186WQ08560 144 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 80.3 ms