RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C MAL12P53341 584 aa1.5□□□□□ -2.17
RPB11YOL005C MNT4P53745 580 aa1.5□□□□□ -2.17
RPB11YOL005C PST1Q12355 444 aa1.5□□□□□ -2.17
RPB11YOL005C AGC1Q12482 902 aa1.5□□□□□ -2.17
RPB11YOL005C GSC2P40989 1895 aa1.5□□□□□ -2.17
RPB11YOL005C YPR117WQ06116 2489 aa1.49□□□□□ -2.17
RPB11YOL005C MAK31P23059 88 aa1.49□□□□□ -2.17
RPB11YOL005C RIB7P33312 244 aa1.49□□□□□ -2.17
RPB11YOL005C SPT8P38915 602 aa1.49□□□□□ -2.17
RPB11YOL005C KAP114P53067 1004 aa1.49□□□□□ -2.17
RPB11YOL005C EBS1Q03466 884 aaKnown RBP1.49□□□□□ -2.17
RPB11YOL005C ATC1Q04005 294 aa1.49□□□□□ -2.17
RPB11YOL005C COX20Q04935 205 aa1.49□□□□□ -2.17
RPB11YOL005C FCF1Q05498 189 aaPredicted RBP1.49□□□□□ -2.17
RPB11YOL005C BOP2Q06150 570 aa1.49□□□□□ -2.17
RPB11YOL005C YPL119C-AQ3E751 87 aa1.49□□□□□ -2.17
RPB11YOL005C DUR1,2P32528 1835 aaKnown RBP1.49□□□□□ -2.17
RPB11YOL005C TAO3P40468 2376 aa1.49□□□□□ -2.17
RPB11YOL005C RAD50P12753 1312 aa1.48□□□□□ -2.17
RPB11YOL005C TOM40P23644 387 aaKnown RBP1.48□□□□□ -2.17
RPB11YOL005C RNP1P32385 249 aa1.48□□□□□ -2.17
RPB11YOL005C DDI1P40087 428 aa1.48□□□□□ -2.17
RPB11YOL005C NBP35P52920 328 aa1.48□□□□□ -2.17
RPB11YOL005C MAL13P53338 473 aa1.48□□□□□ -2.17
RPB11YOL005C SWS2P53937 143 aa1.48□□□□□ -2.17
RPB11YOL005C YDR209CQ03480 137 aa1.48□□□□□ -2.17
RPB11YOL005C MYO5Q04439 1219 aaKnown RBP1.48□□□□□ -2.17
RPB11YOL005C YMR114CQ04471 368 aaKnown RBP1.48□□□□□ -2.17
RPB11YOL005C PLB3Q08108 686 aa1.48□□□□□ -2.17
RPB11YOL005C BTS1Q12051 335 aa1.48□□□□□ -2.17
RPB11YOL005C YPR011CQ12251 326 aa1.48□□□□□ -2.17
RPB11YOL005C SME1Q12330 94 aaPredicted RBP1.48□□□□□ -2.17
RPB11YOL005C TUS1Q06412 1307 aa1.47□□□□□ -2.17
RPB11YOL005C CWP1P28319 239 aa1.47□□□□□ -2.17
RPB11YOL005C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
RPB11YOL005C TVP38P36164 337 aa1.47□□□□□ -2.17
RPB11YOL005C TEM1P38987 245 aa1.47□□□□□ -2.17
RPB11YOL005C GAA1P39012 614 aa1.47□□□□□ -2.17
RPB11YOL005C PRM9P39551 298 aa1.47□□□□□ -2.17
RPB11YOL005C MEP1P40260 492 aa1.47□□□□□ -2.17
RPB11YOL005C RPL10P41805 221 aaKnown RBP1.47□□□□□ -2.17
RPB11YOL005C PGA2P53903 129 aa1.47□□□□□ -2.17
RPB11YOL005C AAH1P53909 347 aa1.47□□□□□ -2.17
RPB11YOL005C ALG11P53954 548 aaKnown RBP1.47□□□□□ -2.17
RPB11YOL005C SLM2P53955 656 aa1.47□□□□□ -2.17
RPB11YOL005C EMI1Q04406 187 aa1.47□□□□□ -2.17
RPB11YOL005C ADH6Q04894 360 aaKnown RBP1.47□□□□□ -2.17
RPB11YOL005C SPO77Q06134 477 aa1.47□□□□□ -2.17
RPB11YOL005C CTS2Q06350 511 aa1.47□□□□□ -2.17
RPB11YOL005C YOL107WQ12239 342 aa1.47□□□□□ -2.17
RPB11YOL005C GEP5Q12393 293 aa1.47□□□□□ -2.17
RPB11YOL005C YPL247CQ12523 523 aa1.47□□□□□ -2.17
RPB11YOL005C SNA3P14359 133 aa1.46□□□□□ -2.18
RPB11YOL005C QRI5P32344 111 aa1.46□□□□□ -2.18
RPB11YOL005C YGP1P38616 354 aaKnown RBP1.46□□□□□ -2.18
RPB11YOL005C AGX1P43567 385 aa1.46□□□□□ -2.18
RPB11YOL005C YJR146WP47174 117 aa1.46□□□□□ -2.18
RPB11YOL005C MDM34P53083 459 aa1.46□□□□□ -2.18
RPB11YOL005C CWC21Q03375 135 aaKnown RBP1.46□□□□□ -2.18
RPB11YOL005C YLR179CQ06252 201 aaKnown RBP1.46□□□□□ -2.18
RPB11YOL005C YOR268CQ08734 132 aa1.46□□□□□ -2.18
RPB11YOL005C YBL008W-AQ3E821 79 aa1.46□□□□□ -2.18
RPB11YOL005C ECM29P38737 1868 aa1.46□□□□□ -2.18
RPB11YOL005C COX2P00410 251 aa1.45□□□□□ -2.18
RPB11YOL005C RAD3P06839 778 aa1.45□□□□□ -2.18
RPB11YOL005C DAL82P21705 255 aa1.45□□□□□ -2.18
RPB11YOL005C VPS3P23643 1011 aa1.45□□□□□ -2.18
RPB11YOL005C GDH2P33327 1092 aaKnown RBP1.45□□□□□ -2.18
RPB11YOL005C SSH1P38353 490 aaKnown RBP1.45□□□□□ -2.18
RPB11YOL005C SIP3P38717 1229 aa1.45□□□□□ -2.18
RPB11YOL005C HMF1P40037 129 aaKnown RBP1.45□□□□□ -2.18
RPB11YOL005C YPR147CQ06522 304 aaKnown RBP1.45□□□□□ -2.18
RPB11YOL005C SMT3Q12306 101 aaKnown RBP1.45□□□□□ -2.18
RPB11YOL005C NOT5Q12514 560 aaPredicted RBP1.45□□□□□ -2.18
RPB11YOL005C RPL26AP05743 127 aaKnown RBP1.44□□□□□ -2.18
RPB11YOL005C COS2P0CX12 379 aa1.44□□□□□ -2.18
RPB11YOL005C COS3P0CX13 379 aa1.44□□□□□ -2.18
RPB11YOL005C DPM1P14020 267 aaKnown RBP1.44□□□□□ -2.18
RPB11YOL005C POL30P15873 258 aaKnown RBP1.44□□□□□ -2.18
RPB11YOL005C BMH2P34730 273 aaKnown RBP1.44□□□□□ -2.18
RPB11YOL005C PRS2P38620 318 aaKnown RBP1.44□□□□□ -2.18
RPB11YOL005C YHR045WP38775 560 aa1.44□□□□□ -2.18
RPB11YOL005C FIS1P40515 155 aa1.44□□□□□ -2.18
RPB11YOL005C MNN5P46982 586 aa1.44□□□□□ -2.18
RPB11YOL005C RPL26BP53221 127 aaKnown RBP1.44□□□□□ -2.18
RPB11YOL005C YNL134CP53912 376 aaKnown RBP1.44□□□□□ -2.18
RPB11YOL005C ASI3P53983 676 aa1.44□□□□□ -2.18
RPB11YOL005C VPS68Q12016 184 aa1.44□□□□□ -2.18
RPB11YOL005C MYO1P08964 1928 aa1.43□□□□□ -2.18
RPB11YOL005C MATALPHA2P0CY08 210 aa1.43□□□□□ -2.18
RPB11YOL005C HMLALPHA2P0CY09 210 aa1.43□□□□□ -2.18
RPB11YOL005C CLB6P32943 380 aa1.43□□□□□ -2.18
RPB11YOL005C JEN1P36035 616 aa1.43□□□□□ -2.18
RPB11YOL005C YHL026CP38740 315 aa1.43□□□□□ -2.18
RPB11YOL005C PET100P38958 111 aa1.43□□□□□ -2.18
RPB11YOL005C DSN1P40568 576 aa1.43□□□□□ -2.18
RPB11YOL005C BBP1Q12365 385 aa1.43□□□□□ -2.18
RPB11YOL005C UBR2Q07963 1872 aa1.43□□□□□ -2.18
RPB11YOL005C TCP1P12612 559 aaKnown RBP1.42□□□□□ -2.18
RPB11YOL005C SEC22P22214 214 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms