RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	TCD1	P38756	429 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	EDC3	P39998	551 aa	Known RBP	0.12	□□□□□ -2.39
RCO1	YMR075W	FCY21	P40039	528 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	RTT105	P40063	208 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	HUA1	P40325	198 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	SHQ1	P40486	507 aa	Predicted RBP	0.12	□□□□□ -2.39
RCO1	YMR075W	RSM25	P40496	264 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	ICE2	P40499	491 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	YJR056C	P47115	236 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	AIF1	P52923	378 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	KAP114	P53067	1004 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	TOS8	P53147	276 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	GTR2	P53290	341 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	MNT4	P53745	580 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	GRX5	Q02784	150 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	YDR248C	Q03786	193 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	YMR111C	Q04461	462 aa	Predicted RBP	0.12	□□□□□ -2.39
RCO1	YMR075W	ANT1	Q06497	328 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	YLR413W	Q06689	675 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	VAC14	Q06708	880 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	SYC1	Q08553	188 aa	Predicted RBP	0.12	□□□□□ -2.39
RCO1	YMR075W	YPR011C	Q12251	326 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	TPO4	Q12256	659 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	SME1	Q12330	94 aa	Predicted RBP	0.12	□□□□□ -2.39
RCO1	YMR075W	LSO2	Q3E772	92 aa	Known RBP	0.12	□□□□□ -2.39
RCO1	YMR075W	YBL112C	Q3E7Y4	105 aa		0.12	□□□□□ -2.39
RCO1	YMR075W	CDC8	P00572	216 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	CPA1	P07258	411 aa	Known RBP	0.11	□□□□□ -2.39
RCO1	YMR075W	YKR104W	P0CE69	306 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	PET9	P18239	318 aa	Known RBP	0.11	□□□□□ -2.39
RCO1	YMR075W	TOM40	P23644	387 aa	Known RBP	0.11	□□□□□ -2.39
RCO1	YMR075W	POF1	P25576	258 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.11	□□□□□ -2.39	not detected
RCO1	YMR075W	SNC2	P33328	115 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	KDX1	P36005	433 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	MRX3	P38172	270 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	ECM13	P38195	257 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	DOG1	P38774	246 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	YHR127W	P38833	243 aa	Known RBP	0.11	□□□□□ -2.39
RCO1	YMR075W	RIB4	P50861	169 aa	Predicted RBP	0.11	□□□□□ -2.39
RCO1	YMR075W	USE1	P53146	245 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	ABF2	Q02486	183 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	SDC1	Q03323	175 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	EMI1	Q04406	187 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	YML096W	Q04489	525 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	HEM25	Q07534	307 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	CSI2	Q08054	341 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	YOR029W	Q12243	111 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	SNF8	Q12483	233 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	NOT5	Q12514	560 aa	Predicted RBP	0.11	□□□□□ -2.39
RCO1	YMR075W	YNL146C-A	Q3E7Z1	64 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	SWI1	P09547	1314 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	TUS1	Q06412	1307 aa		0.11	□□□□□ -2.39
RCO1	YMR075W	MSF1	P08425	469 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	YER188C-A	P0C0V2	99 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	YPR170W-B	P0C5R9	85 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	DDI2	P0CH63	225 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	DDI3	P0CH64	225 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	RPL2A	P0CX45	254 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	RPL2B	P0CX46	254 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	SNA3	P14359	133 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	MRPL28	P36527	147 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	RIB1	P38066	345 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	YBR063C	P38083	404 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	CUE1	P38428	203 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	BIG1	P38813	335 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	YER076C	P40049	302 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	YIL102C	P40488	101 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	TIR3	P40552	269 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	YGL185C	P53100	379 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	MRH4	P53166	561 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	UBC7	Q02159	165 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	SPO19	Q03029	223 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	GAS3	Q03655	524 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	SPG4	Q04438	115 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	YMR226C	Q05016	267 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	YOL160W	Q08321	113 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	EMP46	Q12396	444 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	MSB2	P32334	1306 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	NSP1	P14907	823 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	OPI1	P21957	404 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	MGM101	P32787	269 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	YPT52	P36018	234 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	JEN1	P36035	616 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	MSA2	P36157	363 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	PRS2	P38620	318 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	SIP3	P38717	1229 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.1	□□□□□ -2.39	not detected
RCO1	YMR075W	AST2	P39945	430 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	GLE2	P40066	365 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	PRE6	P40303	254 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	ARO8	P53090	500 aa	Known RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	YGL159W	P53110	370 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	NSA1	P53136	463 aa	Predicted RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	OST6	Q03723	332 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	CUE4	Q04201	117 aa	Predicted RBP	0.1	□□□□□ -2.39
RCO1	YMR075W	VBA1	Q04301	562 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	ERV41	Q04651	352 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	YLR162W	Q06235	118 aa		0.1	□□□□□ -2.39
RCO1	YMR075W	CUR1	Q06469	252 aa		0.1	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms