RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C CUP1-1P0CX80 61 aa2.35□□□□□ -2.03
YMR050CYMR050C CUP1-2P0CX81 61 aa2.35□□□□□ -2.03
YMR050CYMR050C HMRA2P0CY13 119 aa2.35□□□□□ -2.03
YMR050CYMR050C MSK1P32048 576 aa2.35□□□□□ -2.03
YMR050CYMR050C RIB7P33312 244 aa2.35□□□□□ -2.03
YMR050CYMR050C IRS4P36115 615 aaKnown RBP2.35□□□□□ -2.03
YMR050CYMR050C MRPL4P36517 319 aa2.35□□□□□ -2.03
YMR050CYMR050C PTC7P38797 343 aa2.35□□□□□ -2.03
YMR050CYMR050C YGL176CP46945 554 aa2.35□□□□□ -2.03
YMR050CYMR050C LSC1P53598 329 aaKnown RBP2.35□□□□□ -2.03
YMR050CYMR050C ATG39Q06159 398 aa2.35□□□□□ -2.03
YMR050CYMR050C FRE6Q12473 712 aa2.35□□□□□ -2.03
YMR050CYMR050C RAS1P01119 309 aa2.35□□□□□ -2.03
YMR050CYMR050C TOM40P23644 387 aaKnown RBP2.35□□□□□ -2.03
YMR050CYMR050C HSP30P25619 332 aa2.35□□□□□ -2.03
YMR050CYMR050C PPZ2P33329 710 aa2.35□□□□□ -2.03
YMR050CYMR050C CMC1P36064 111 aa2.35□□□□□ -2.03
YMR050CYMR050C PEX7P39108 375 aa2.35□□□□□ -2.03
YMR050CYMR050C RPA14P50106 137 aa2.35□□□□□ -2.03
YMR050CYMR050C MIG2P53035 382 aa2.35□□□□□ -2.03
YMR050CYMR050C PRM8P53174 237 aa2.35□□□□□ -2.03
YMR050CYMR050C RIM8P53179 542 aa2.35□□□□□ -2.03
YMR050CYMR050C TDA7P53882 636 aaPredicted RBP2.35□□□□□ -2.03
YMR050CYMR050C SLF1Q12034 447 aaKnown RBP2.35□□□□□ -2.03
YMR050CYMR050C YOS1Q3E834 85 aa2.35□□□□□ -2.03
YMR050CYMR050C NHP6BP11633 99 aaKnown RBP2.35□□□□□ -2.03
YMR050CYMR050C ACH1P32316 526 aa2.35□□□□□ -2.03
YMR050CYMR050C YEL057CP39983 233 aa2.35□□□□□ -2.03
YMR050CYMR050C YJL163CP46996 555 aa2.35□□□□□ -2.03
YMR050CYMR050C MRX5P47007 382 aa2.35□□□□□ -2.03
YMR050CYMR050C YNL046WP53956 172 aa2.35□□□□□ -2.03
YMR050CYMR050C ADD37Q03233 198 aa2.35□□□□□ -2.03
YMR050CYMR050C MCP1Q12106 302 aa2.35□□□□□ -2.03
YMR050CYMR050C RLM1Q12224 676 aa2.35□□□□□ -2.03
YMR050CYMR050C TAD3Q9URQ3 322 aa2.35□□□□□ -2.03
YMR050CYMR050C RPL20AP0CX23 172 aaKnown RBP2.35□□□□□ -2.03
YMR050CYMR050C RPL20BP0CX24 172 aaPredicted RBP2.35□□□□□ -2.03
YMR050CYMR050C ANB1P19211 157 aa2.35□□□□□ -2.03
YMR050CYMR050C EXG1P23776 448 aaKnown RBP2.35□□□□□ -2.03
YMR050CYMR050C PAD1P33751 242 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
YMR050CYMR050C SDH4P37298 181 aa2.35□□□□□ -2.03
YMR050CYMR050C ERV15P38312 142 aa2.35□□□□□ -2.03
YMR050CYMR050C COX15P40086 486 aa2.35□□□□□ -2.03
YMR050CYMR050C CWC23P52868 283 aaPredicted RBP2.35□□□□□ -2.03
YMR050CYMR050C YHC1Q05900 231 aaKnown RBP2.35□□□□□ -2.03
YMR050CYMR050C STP4Q07351 490 aa2.35□□□□□ -2.03
YMR050CYMR050C ATX2Q12067 313 aa2.35□□□□□ -2.03
YMR050CYMR050C DAD1Q12248 94 aa2.35□□□□□ -2.03
YMR050CYMR050C YOR192C-CQ3E736 78 aa2.35□□□□□ -2.03
YMR050CYMR050C YKL068W-AQ3E826 78 aa2.35□□□□□ -2.03
YMR050CYMR050C VAR1P02381 398 aa2.34□□□□□ -2.03
YMR050CYMR050C PHO91P27514 894 aa2.34□□□□□ -2.03
YMR050CYMR050C HXT9P40885 567 aa2.34□□□□□ -2.03
YMR050CYMR050C UBX6P47049 396 aa2.34□□□□□ -2.03
YMR050CYMR050C BIO4P53630 237 aa2.34□□□□□ -2.03
YMR050CYMR050C COG5P53951 403 aa2.34□□□□□ -2.03
YMR050CYMR050C HXT11P54862 567 aa2.34□□□□□ -2.03
YMR050CYMR050C ACT1P60010 375 aaKnown RBP2.34□□□□□ -2.03
YMR050CYMR050C SLT2Q00772 484 aa2.34□□□□□ -2.03
YMR050CYMR050C SIA1Q12212 622 aa2.34□□□□□ -2.03
YMR050CYMR050C YLR146W-AQ2V2P1 62 aa2.34□□□□□ -2.03
YMR050CYMR050C UBA3Q99344 299 aa2.34□□□□□ -2.03
YMR050CYMR050C RPL3P14126 387 aaKnown RBP2.34□□□□□ -2.03
YMR050CYMR050C SUA5P32579 426 aa2.34□□□□□ -2.03
YMR050CYMR050C APS1P35181 156 aa2.34□□□□□ -2.03
YMR050CYMR050C EFM4P40516 257 aa2.34□□□□□ -2.03
YMR050CYMR050C SNO3P43544 222 aa2.34□□□□□ -2.03
YMR050CYMR050C CTR1P49573 406 aa2.34□□□□□ -2.03
YMR050CYMR050C YGL185CP53100 379 aa2.34□□□□□ -2.03
YMR050CYMR050C GPG1P53130 126 aa2.34□□□□□ -2.03
YMR050CYMR050C CPD1P53314 239 aa2.34□□□□□ -2.03
YMR050CYMR050C HSP31Q04432 237 aa2.34□□□□□ -2.03
YMR050CYMR050C MSC3Q05812 728 aa2.34□□□□□ -2.03
YMR050CYMR050C ARV1Q06541 321 aa2.34□□□□□ -2.03
YMR050CYMR050C ARR3Q06598 404 aa2.34□□□□□ -2.03
YMR050CYMR050C GEP3Q08622 556 aa2.34□□□□□ -2.03
YMR050CYMR050C YOL159C-AQ3E769 90 aa2.34□□□□□ -2.03
YMR050CYMR050C MCM10P32354 571 aa2.34□□□□□ -2.03
YMR050CYMR050C EMP24P32803 203 aaKnown RBP2.34□□□□□ -2.03
YMR050CYMR050C TES1P41903 349 aaKnown RBP2.34□□□□□ -2.03
YMR050CYMR050C IMD4P50094 524 aaKnown RBP2.34□□□□□ -2.03
YMR050CYMR050C JAC1P53193 184 aa2.34□□□□□ -2.03
YMR050CYMR050C UPS3Q04006 179 aa2.34□□□□□ -2.03
YMR050CYMR050C BNA7Q04066 261 aa2.34□□□□□ -2.03
YMR050CYMR050C YMR310CQ04867 317 aaPredicted RBP2.34□□□□□ -2.03
YMR050CYMR050C YLR179CQ06252 201 aaKnown RBP2.34□□□□□ -2.03
YMR050CYMR050C BUD20Q08004 166 aaPredicted RBP2.34□□□□□ -2.03
YMR050CYMR050C MES1P00958 751 aaKnown RBP2.34□□□□□ -2.04
YMR050CYMR050C SIR2P06700 562 aa2.34□□□□□ -2.04
YMR050CYMR050C YEL076C-AP0CX16 216 aa2.34□□□□□ -2.04
YMR050CYMR050C YLR464WP0CX17 216 aa2.34□□□□□ -2.04
YMR050CYMR050C TIR1P10863 254 aa2.34□□□□□ -2.04
YMR050CYMR050C CTA1P15202 515 aa2.34□□□□□ -2.04
YMR050CYMR050C SNC2P33328 115 aa2.34□□□□□ -2.04
YMR050CYMR050C UPS2P35200 230 aa2.34□□□□□ -2.04
YMR050CYMR050C YBR292CP38357 123 aa2.34□□□□□ -2.04
YMR050CYMR050C YEL076CP39971 216 aa2.34□□□□□ -2.04
YMR050CYMR050C RBG2P53295 368 aaKnown RBP2.34□□□□□ -2.04
YMR050CYMR050C YDR209CQ03480 137 aa2.34□□□□□ -2.04
YMR050CYMR050C AGE1Q04412 482 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 113.5 ms