RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W UPS2P35200 230 aa3.82□□□□□ -1.8
SEN1YLR430W PEX7P39108 375 aa3.82□□□□□ -1.8
SEN1YLR430W PUG1P40100 303 aa3.82□□□□□ -1.8
SEN1YLR430W PHS1P40857 217 aa3.82□□□□□ -1.8
SEN1YLR430W SUE1Q06524 206 aa3.82□□□□□ -1.8
SEN1YLR430W BSC6Q08280 497 aa3.82□□□□□ -1.8
SEN1YLR430W FRE8Q12209 686 aa3.82□□□□□ -1.8
SEN1YLR430W GEP5Q12393 293 aa3.82□□□□□ -1.8
SEN1YLR430W RAX2Q12465 1220 aa3.82□□□□□ -1.8
SEN1YLR430W PUS6P53294 404 aa3.82□□□□□ -1.8
SEN1YLR430W APS2Q00381 147 aa3.82□□□□□ -1.8
SEN1YLR430W LRE1P25579 583 aaKnown RBP3.81□□□□□ -1.8
SEN1YLR430W DAD2P36162 133 aa3.81□□□□□ -1.8
SEN1YLR430W YIL165CP40446 119 aa3.81□□□□□ -1.8
SEN1YLR430W XPT1P47165 209 aa3.81□□□□□ -1.8
SEN1YLR430W EFM6P53970 246 aa3.81□□□□□ -1.8
SEN1YLR430W BSP1Q06604 576 aa3.81□□□□□ -1.8
SEN1YLR430W YLR036CQ07986 203 aa3.81□□□□□ -1.8
SEN1YLR430W RPL7BQ12213 244 aaKnown RBP3.81□□□□□ -1.8
SEN1YLR430W MRPL24P36525 258 aaPredicted RBP3.81□□□□□ -1.8
SEN1YLR430W MAF1P41910 395 aa3.81□□□□□ -1.8
SEN1YLR430W MTM1P53320 366 aa3.81□□□□□ -1.8
SEN1YLR430W YLR050CQ12155 161 aaKnown RBP3.81□□□□□ -1.8
SEN1YLR430W FRE7Q12333 620 aa3.81□□□□□ -1.8
SEN1YLR430W YLR361C-AQ3E795 98 aa3.81□□□□□ -1.8
SEN1YLR430W YCR023CP25351 611 aa3.81□□□□□ -1.8
SEN1YLR430W CNE1P27825 502 aa3.81□□□□□ -1.8
SEN1YLR430W ATS1P31386 333 aa3.81□□□□□ -1.8
SEN1YLR430W DOG2P38773 246 aa3.81□□□□□ -1.8
SEN1YLR430W NIF3P53081 288 aa3.81□□□□□ -1.8
SEN1YLR430W MTQ2Q03920 221 aaPredicted RBP3.81□□□□□ -1.8
SEN1YLR430W MBF1O14467 151 aaKnown RBP3.81□□□□□ -1.8
SEN1YLR430W SRM1P21827 482 aa3.81□□□□□ -1.8
SEN1YLR430W REG2P38232 338 aa3.81□□□□□ -1.8
SEN1YLR430W YJL163CP46996 555 aa3.81□□□□□ -1.8
SEN1YLR430W PPZ2P33329 710 aa3.81□□□□□ -1.8
SEN1YLR430W NAS2P40555 220 aa3.81□□□□□ -1.8
SEN1YLR430W MSY1P48527 492 aa3.81□□□□□ -1.8
SEN1YLR430W ERG26P53199 349 aaKnown RBP3.81□□□□□ -1.8
SEN1YLR430W ADD37Q03233 198 aa3.81□□□□□ -1.8
SEN1YLR430W TAZ1Q06510 381 aa3.81□□□□□ -1.8
SEN1YLR430W CRD1Q07560 283 aa3.81□□□□□ -1.8
SEN1YLR430W MDH3P32419 343 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SEN1YLR430W PRP11Q07350 266 aaPredicted RBP3.8□□□□□ -1.8
SEN1YLR430W YOL024WQ08172 172 aa3.8□□□□□ -1.8
SEN1YLR430W MEK1P24719 497 aaPredicted RBP3.8□□□□□ -1.8
SEN1YLR430W THI80P35202 319 aa3.8□□□□□ -1.8
SEN1YLR430W YHR127WP38833 243 aaKnown RBP3.8□□□□□ -1.8
SEN1YLR430W MEP2P41948 499 aa3.8□□□□□ -1.8
SEN1YLR430W AVT1P47082 602 aa3.8□□□□□ -1.8
SEN1YLR430W CDC14Q00684 551 aa3.8□□□□□ -1.8
SEN1YLR430W YPL077CQ02831 240 aa3.8□□□□□ -1.8
SEN1YLR430W EST3Q03096 181 aa3.8□□□□□ -1.8
SEN1YLR430W YLR326WQ06170 240 aaKnown RBP3.8□□□□□ -1.8
SEN1YLR430W WTM2Q12206 467 aa3.8□□□□□ -1.8
SEN1YLR430W CBP4P37267 147 aa3.8□□□□□ -1.8
SEN1YLR430W AGP2P38090 596 aa3.8□□□□□ -1.8
SEN1YLR430W NTC20P38302 140 aaPredicted RBP3.8□□□□□ -1.8
SEN1YLR430W SAF1P38352 637 aa3.8□□□□□ -1.8
SEN1YLR430W TES1P41903 349 aaKnown RBP3.8□□□□□ -1.8
SEN1YLR430W PET130P47065 347 aa3.8□□□□□ -1.8
SEN1YLR430W TTI2P47168 421 aa3.8□□□□□ -1.8
SEN1YLR430W SCW10Q04951 389 aa3.8□□□□□ -1.8
SEN1YLR430W TGL5Q12043 749 aa3.8□□□□□ -1.8
SEN1YLR430W TDH3P00359 332 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SEN1YLR430W GLC7P32598 312 aaKnown RBP3.8□□□□□ -1.8
SEN1YLR430W SPT23P35210 1082 aa3.8□□□□□ -1.8
SEN1YLR430W DUO1P53168 247 aaKnown RBP3.8□□□□□ -1.8
SEN1YLR430W COX18P53239 316 aa3.8□□□□□ -1.8
SEN1YLR430W RTT102P53330 157 aa3.8□□□□□ -1.8
SEN1YLR430W IES4Q08561 116 aa3.8□□□□□ -1.8
SEN1YLR430W YPL162CQ12042 273 aa3.8□□□□□ -1.8
SEN1YLR430W YEL028WP39989 153 aa3.8□□□□□ -1.8
SEN1YLR430W YIR007WP40566 764 aa3.8□□□□□ -1.8
SEN1YLR430W OTU1P43558 301 aa3.8□□□□□ -1.8
SEN1YLR430W ATG27P46989 271 aa3.8□□□□□ -1.8
SEN1YLR430W YJR015WP47090 510 aa3.8□□□□□ -1.8
SEN1YLR430W HSV2P50079 448 aaPredicted RBP3.8□□□□□ -1.8
SEN1YLR430W CCE1Q03702 353 aa3.8□□□□□ -1.8
SEN1YLR430W HRI1Q05905 244 aaKnown RBP3.8□□□□□ -1.8
SEN1YLR430W YPR098CQ06089 161 aa3.8□□□□□ -1.8
SEN1YLR430W ADH1P00330 348 aaKnown RBP3.8□□□□□ -1.8
SEN1YLR430W YER190C-BP0CX94 160 aa3.8□□□□□ -1.8
SEN1YLR430W YEL077W-AP0CX95 160 aa3.8□□□□□ -1.8
SEN1YLR430W YGR296C-BP0CX96 160 aa3.8□□□□□ -1.8
SEN1YLR430W YPL283W-BP0CX97 160 aa3.8□□□□□ -1.8
SEN1YLR430W YPR204C-AP0CX98 160 aa3.8□□□□□ -1.8
SEN1YLR430W ERS1P17261 260 aa3.8□□□□□ -1.8
SEN1YLR430W DCG1P32460 244 aa3.8□□□□□ -1.8
SEN1YLR430W GEX2P36173 615 aa3.8□□□□□ -1.8
SEN1YLR430W GRX8Q05926 109 aa3.8□□□□□ -1.8
SEN1YLR430W YOR378WQ08902 515 aa3.8□□□□□ -1.8
SEN1YLR430W YKU70P32807 602 aa3.79□□□□□ -1.8
SEN1YLR430W YER158CP40095 573 aa3.79□□□□□ -1.8
SEN1YLR430W RNH201P53942 307 aa3.79□□□□□ -1.8
SEN1YLR430W SUR7P54003 302 aa3.79□□□□□ -1.8
SEN1YLR430W RRT7Q07829 113 aa3.79□□□□□ -1.8
SEN1YLR430W RKI1Q12189 258 aa3.79□□□□□ -1.8
SEN1YLR430W TPT1Q12272 230 aaKnown RBP3.79□□□□□ -1.8
SEN1YLR430W YCL012CQ8J0M4 134 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms