RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W PEX17P40155 199 aa2.44□□□□□ -2.02
YLR400WYLR400W YMR144WP40214 342 aaKnown RBP2.44□□□□□ -2.02
YLR400WYLR400W IRC18P47056 224 aa2.44□□□□□ -2.02
YLR400WYLR400W GOT1Q03554 138 aa2.44□□□□□ -2.02
YLR400WYLR400W YPR011CQ12251 326 aa2.44□□□□□ -2.02
YLR400WYLR400W MRX4Q12467 430 aa2.44□□□□□ -2.02
YLR400WYLR400W YBL008W-AQ3E821 79 aa2.44□□□□□ -2.02
YLR400WYLR400W SWI1P09547 1314 aa2.43□□□□□ -2.02
YLR400WYLR400W MRPS9P38120 278 aa2.43□□□□□ -2.02
YLR400WYLR400W TRR2P38816 342 aa2.43□□□□□ -2.02
YLR400WYLR400W SPL2P38839 148 aa2.43□□□□□ -2.02
YLR400WYLR400W YER189WP40104 122 aa2.43□□□□□ -2.02
YLR400WYLR400W BMT5P40493 336 aa2.43□□□□□ -2.02
YLR400WYLR400W YFL012WP43580 148 aa2.43□□□□□ -2.02
YLR400WYLR400W YFR045WP43617 309 aa2.43□□□□□ -2.02
YLR400WYLR400W GET1P53192 235 aa2.43□□□□□ -2.02
YLR400WYLR400W HST4P53688 370 aa2.43□□□□□ -2.02
YLR400WYLR400W FAR8Q05040 523 aa2.43□□□□□ -2.02
YLR400WYLR400W MRX8Q05473 314 aa2.43□□□□□ -2.02
YLR400WYLR400W SMD2Q06217 110 aaKnown RBP2.43□□□□□ -2.02
YLR400WYLR400W HEM25Q07534 307 aa2.43□□□□□ -2.02
YLR400WYLR400W CLP1Q08685 445 aaPredicted RBP2.43□□□□□ -2.02
YLR400WYLR400W PAN1P32521 1480 aa2.43□□□□□ -2.02
YLR400WYLR400W CDC28P00546 298 aaKnown RBP2.42□□□□□ -2.02
YLR400WYLR400W YOL163WP0CF20 169 aa2.42□□□□□ -2.02
YLR400WYLR400W ZWF1P11412 505 aaKnown RBP2.42□□□□□ -2.02
YLR400WYLR400W YAK1P14680 807 aa2.42□□□□□ -2.02
YLR400WYLR400W DBF2P22204 572 aa2.42□□□□□ -2.02
YLR400WYLR400W TEM1P38987 245 aa2.42□□□□□ -2.02
YLR400WYLR400W MDM34P53083 459 aa2.42□□□□□ -2.02
YLR400WYLR400W PDR17P53844 350 aa2.42□□□□□ -2.02
YLR400WYLR400W FCF1Q05498 189 aaPredicted RBP2.42□□□□□ -2.02
YLR400WYLR400W YOL019WQ08157 551 aa2.42□□□□□ -2.02
YLR400WYLR400W RME1P32338 300 aaKnown RBP2.41□□□□□ -2.02
YLR400WYLR400W SFC1P33303 322 aa2.41□□□□□ -2.02
YLR400WYLR400W YCR087C-AP37263 153 aa2.41□□□□□ -2.02
YLR400WYLR400W ERG10P41338 398 aaKnown RBP2.41□□□□□ -2.02
YLR400WYLR400W RMR1P53060 241 aa2.41□□□□□ -2.02
YLR400WYLR400W DIA1P54005 336 aa2.41□□□□□ -2.02
YLR400WYLR400W YLR179CQ06252 201 aaKnown RBP2.41□□□□□ -2.02
YLR400WYLR400W ISD11Q6Q560 94 aa2.41□□□□□ -2.02
YLR400WYLR400W COX5AP00424 153 aa2.4□□□□□ -2.03
YLR400WYLR400W SGA1P08019 549 aa2.4□□□□□ -2.03
YLR400WYLR400W BMH1P29311 267 aaKnown RBP2.4□□□□□ -2.03
YLR400WYLR400W ATP7P30902 174 aa2.4□□□□□ -2.03
YLR400WYLR400W OAC1P32332 324 aa2.4□□□□□ -2.03
YLR400WYLR400W SPS18P32572 300 aa2.4□□□□□ -2.03
YLR400WYLR400W CAT5P41735 233 aa2.4□□□□□ -2.03
YLR400WYLR400W BXI1P48558 297 aa2.4□□□□□ -2.03
YLR400WYLR400W PET191Q02772 108 aa2.4□□□□□ -2.03
YLR400WYLR400W CDD1Q06549 142 aa2.4□□□□□ -2.03
YLR400WYLR400W YLR030WQ07967 263 aa2.4□□□□□ -2.03
YLR400WYLR400W IES3Q12345 250 aa2.4□□□□□ -2.03
YLR400WYLR400W YLR462WO13556 202 aa2.39□□□□□ -2.03
YLR400WYLR400W SEC4P07560 215 aaKnown RBP2.39□□□□□ -2.03
YLR400WYLR400W SEC22P22214 214 aa2.39□□□□□ -2.03
YLR400WYLR400W GRE3P38715 327 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
YLR400WYLR400W EGD2P38879 174 aaKnown RBP2.39□□□□□ -2.03
YLR400WYLR400W YEL075CP39972 122 aa2.39□□□□□ -2.03
YLR400WYLR400W RPA43P46669 326 aa2.39□□□□□ -2.03
YLR400WYLR400W YGL159WP53110 370 aa2.39□□□□□ -2.03
YLR400WYLR400W RSM27P53305 110 aa2.39□□□□□ -2.03
YLR400WYLR400W ERV29P53337 310 aa2.39□□□□□ -2.03
YLR400WYLR400W DID2P69771 204 aa2.39□□□□□ -2.03
YLR400WYLR400W RSM10Q03201 203 aa2.39□□□□□ -2.03
YLR400WYLR400W YPL150WQ12152 901 aa2.39□□□□□ -2.03
YLR400WYLR400W YEL009C-AA0A023PZF2 135 aa2.38□□□□□ -2.03
YLR400WYLR400W TCA17P32613 152 aa2.38□□□□□ -2.03
YLR400WYLR400W ARC19P33204 171 aaKnown RBP2.38□□□□□ -2.03
YLR400WYLR400W ECM4P36156 370 aa2.38□□□□□ -2.03
YLR400WYLR400W MSA2P36157 363 aa2.38□□□□□ -2.03
YLR400WYLR400W SSH1P38353 490 aaKnown RBP2.38□□□□□ -2.03
YLR400WYLR400W FAR7P43592 221 aa2.38□□□□□ -2.03
YLR400WYLR400W MIG2P53035 382 aa2.38□□□□□ -2.03
YLR400WYLR400W FLC3P53121 802 aa2.38□□□□□ -2.03
YLR400WYLR400W ALG9P53868 555 aaKnown RBP2.38□□□□□ -2.03
YLR400WYLR400W YMR279CQ03263 540 aa2.38□□□□□ -2.03
YLR400WYLR400W YDR248CQ03786 193 aa2.38□□□□□ -2.03
YLR400WYLR400W GIM5Q04493 163 aa2.38□□□□□ -2.03
YLR400WYLR400W GRE1Q08969 168 aa2.38□□□□□ -2.03
YLR400WYLR400W GEP5Q12393 293 aa2.38□□□□□ -2.03
YLR400WYLR400W AGC1Q12482 902 aa2.38□□□□□ -2.03
YLR400WYLR400W NUP157P40064 1391 aaKnown RBP2.37□□□□□ -2.03
YLR400WYLR400W HIS3P06633 220 aa2.37□□□□□ -2.03
YLR400WYLR400W RPL35AP0CX84 120 aaKnown RBP2.37□□□□□ -2.03
YLR400WYLR400W RPL35BP0CX85 120 aaKnown RBP2.37□□□□□ -2.03
YLR400WYLR400W GCN3P14741 305 aa2.37□□□□□ -2.03
YLR400WYLR400W RNP1P32385 249 aa2.37□□□□□ -2.03
YLR400WYLR400W APS1P35181 156 aa2.37□□□□□ -2.03
YLR400WYLR400W MID2P36027 376 aa2.37□□□□□ -2.03
YLR400WYLR400W MRPL28P36527 147 aa2.37□□□□□ -2.03
YLR400WYLR400W RPF1P38805 295 aaKnown RBP2.37□□□□□ -2.03
YLR400WYLR400W ECM14P38836 430 aa2.37□□□□□ -2.03
YLR400WYLR400W COG3P40094 801 aa2.37□□□□□ -2.03
YLR400WYLR400W YIL001WP40560 513 aa2.37□□□□□ -2.03
YLR400WYLR400W PFS2P42841 465 aaKnown RBP2.37□□□□□ -2.03
YLR400WYLR400W YJR141WP47172 347 aaPredicted RBP2.37□□□□□ -2.03
YLR400WYLR400W INM2Q05533 292 aa2.37□□□□□ -2.03
YLR400WYLR400W GGA1Q06336 557 aa2.37□□□□□ -2.03
YLR400WYLR400W YNG1Q08465 219 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 114.6 ms