RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	YVH1	Q02256	364 aa	Known RBP	11.02	□□□□□ -0.64
BDF1	YLR399C	POM33	Q12164	279 aa		11.02	□□□□□ -0.64
BDF1	YLR399C	MIR1	P23641	311 aa	Known RBP	11.02	□□□□□ -0.65
BDF1	YLR399C	TIM12	P32830	109 aa		11.02	□□□□□ -0.65
BDF1	YLR399C	RPL14A	P36105	138 aa	Known RBP	11.02	□□□□□ -0.65
BDF1	YLR399C	RPL14B	P38754	138 aa	Known RBP	11.02	□□□□□ -0.65
BDF1	YLR399C	RTC3	P38804	111 aa	Predicted RBP	11.02	□□□□□ -0.65
BDF1	YLR399C	RRD1	P40454	393 aa	Known RBP	11.02	□□□□□ -0.65
BDF1	YLR399C	RPA34	P47006	233 aa	Predicted RBP	11.02	□□□□□ -0.65
BDF1	YLR399C	NSA1	P53136	463 aa	Predicted RBP	11.02	□□□□□ -0.65
BDF1	YLR399C	YOL073C	Q08232	322 aa		11.02	□□□□□ -0.65
BDF1	YLR399C	HO	P09932	586 aa		11.01	□□□□□ -0.65
BDF1	YLR399C	MATALPHA1	P0CY06	175 aa		11.01	□□□□□ -0.65
BDF1	YLR399C	HMLALPHA1	P0CY07	175 aa		11.01	□□□□□ -0.65
BDF1	YLR399C	SLC1	P33333	303 aa		11.01	□□□□□ -0.65
BDF1	YLR399C	UPS2	P35200	230 aa		11.01	□□□□□ -0.65
BDF1	YLR399C	YEA4	P40004	342 aa		11.01	□□□□□ -0.65
BDF1	YLR399C	PHS1	P40857	217 aa		11.01	□□□□□ -0.65
BDF1	YLR399C	SUL2	Q12325	893 aa		11.01	□□□□□ -0.65
BDF1	YLR399C	GDH1	P07262	454 aa	Known RBP	11	□□□□□ -0.65
BDF1	YLR399C	SOH1	P38633	127 aa		11	□□□□□ -0.65
BDF1	YLR399C	RPP1	P38786	293 aa		11	□□□□□ -0.65
BDF1	YLR399C	PEX28	P38848	579 aa		11	□□□□□ -0.65
BDF1	YLR399C	YJR012C	P47087	207 aa		11	□□□□□ -0.65
BDF1	YLR399C	OGG1	P53397	376 aa	Predicted RBP	11	□□□□□ -0.65
BDF1	YLR399C	RPL31A	P0C2H8	113 aa	Known RBP	11	□□□□□ -0.65
BDF1	YLR399C	RPL31B	P0C2H9	113 aa	Known RBP	11	□□□□□ -0.65
BDF1	YLR399C	ERG1	P32476	496 aa	Known RBP	11	□□□□□ -0.65
BDF1	YLR399C	NSA2	P40078	261 aa	Known RBP	11	□□□□□ -0.65
BDF1	YLR399C	RMD9	P53140	646 aa	Known RBP	11	□□□□□ -0.65
BDF1	YLR399C	VAM3	Q12241	283 aa		11	□□□□□ -0.65
BDF1	YLR399C	IZH2	Q12442	317 aa		11	□□□□□ -0.65
BDF1	YLR399C	LAS17	Q12446	633 aa		11	□□□□□ -0.65
BDF1	YLR399C	RPS13	P05756	151 aa	Known RBP	10.99	□□□□□ -0.65
BDF1	YLR399C	OLE1	P21147	510 aa	Known RBP	10.99	□□□□□ -0.65
BDF1	YLR399C	SLY41	P22215	453 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	ERG3	P32353	365 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	YBR096W	P38256	230 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	PAU5	P43575	122 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	SCW4	P53334	386 aa	Known RBP	10.99	□□□□□ -0.65
BDF1	YLR399C	VPS28	Q02767	242 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	VBA2	P38358	474 aa	Known RBP	10.99	□□□□□ -0.65
BDF1	YLR399C	WSS1	P38838	269 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	SKN7	P38889	622 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	BUD8	P41698	603 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	VEL1	P53058	206 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	PKR1	Q03880	122 aa	Known RBP	10.99	□□□□□ -0.65
BDF1	YLR399C	HRT1	Q08273	121 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	YCT1	Q12235	531 aa		10.99	□□□□□ -0.65
BDF1	YLR399C	BGL2	P15703	313 aa	Known RBP	10.98	□□□□□ -0.65
BDF1	YLR399C	DMA1	P38823	416 aa		10.98	□□□□□ -0.65
BDF1	YLR399C	GIC2	Q06648	383 aa		10.98	□□□□□ -0.65
BDF1	YLR399C	ATG5	Q12380	294 aa		10.98	□□□□□ -0.65
BDF1	YLR399C	AGP1	P25376	633 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	STP22	P25604	385 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	YHR210C	P38893	341 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	NAS2	P40555	220 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	YNR066C	P53752	436 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	YPL067C	Q02754	198 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	MRX8	Q05473	314 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	ERP4	Q12450	207 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	RAX2	Q12465	1220 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	NPR1	P22211	790 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	ELO2	P25358	347 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	AUR1	P36107	401 aa	Predicted RBP	10.97	□□□□□ -0.65
BDF1	YLR399C	IRC22	P40006	225 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	YIL089W	P40500	205 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	YIL067C	P40514	678 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	COX16	P47081	118 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	TOM1	Q03280	3268 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	AKR2	Q12013	749 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	YBL029C-A	Q3E756	94 aa		10.97	□□□□□ -0.65
BDF1	YLR399C	QCR2	P07257	368 aa		10.96	□□□□□ -0.65
BDF1	YLR399C	AGA2	P32781	87 aa		10.96	□□□□□ -0.65
BDF1	YLR399C	SSH1	P38353	490 aa	Known RBP	10.96	□□□□□ -0.65
BDF1	YLR399C	PRY3	P47033	881 aa		10.96	□□□□□ -0.65
BDF1	YLR399C	RPC11	Q04307	110 aa	Predicted RBP	10.96	□□□□□ -0.65
BDF1	YLR399C	FSH2	Q05015	223 aa		10.96	□□□□□ -0.65
BDF1	YLR399C	ISR1	Q06098	443 aa	Known RBP	10.96	□□□□□ -0.65
BDF1	YLR399C	NAT5	Q08689	176 aa		10.96	□□□□□ -0.65
BDF1	YLR399C	MCT1	Q12283	360 aa		10.96	□□□□□ -0.65
BDF1	YLR399C	GAS1	P22146	559 aa	Known RBP	10.96	□□□□□ -0.66
BDF1	YLR399C	FRQ1	Q06389	190 aa		10.96	□□□□□ -0.66
BDF1	YLR399C	PIN3	Q06449	215 aa		10.96	□□□□□ -0.66
BDF1	YLR399C	SUT2	Q12286	268 aa		10.96	□□□□□ -0.66
BDF1	YLR399C	LSB5	P25369	354 aa		10.95	□□□□□ -0.66
BDF1	YLR399C	ARO4	P32449	370 aa	Known RBP	10.95	□□□□□ -0.66
BDF1	YLR399C	YBR292C	P38357	123 aa		10.95	□□□□□ -0.66
BDF1	YLR399C	LRO1	P40345	661 aa		10.95	□□□□□ -0.66
BDF1	YLR399C	SMK1	P41808	388 aa		10.95	□□□□□ -0.66
BDF1	YLR399C	YLR152C	P54072	576 aa		10.95	□□□□□ -0.66
BDF1	YLR399C	YML053C	Q04978	212 aa		10.95	□□□□□ -0.66
BDF1	YLR399C	PDX1	P16451	410 aa		10.94	□□□□□ -0.66
BDF1	YLR399C	TRS65	P32893	560 aa		10.94	□□□□□ -0.66
BDF1	YLR399C	UMP1	P38293	148 aa		10.94	□□□□□ -0.66
BDF1	YLR399C	SLM6	P38343	150 aa		10.94	□□□□□ -0.66
BDF1	YLR399C	YIL152W	P40455	235 aa		10.94	□□□□□ -0.66
BDF1	YLR399C	YGR066C	P53242	292 aa		10.94	□□□□□ -0.66
BDF1	YLR399C	CSI2	Q08054	341 aa		10.94	□□□□□ -0.66
BDF1	YLR399C	RPL13B	P40212	199 aa	Known RBP	10.94	□□□□□ -0.66

Retrieved 100 of 5,963 RNA–protein pairs in 50 ms