RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W AVT7P40501 490 aa3.62□□□□□ -1.83
SOF1YLL011W IRC24P40580 263 aa3.62□□□□□ -1.83
SOF1YLL011W IRC18P47056 224 aa3.62□□□□□ -1.83
SOF1YLL011W BNS1P50084 137 aa3.62□□□□□ -1.83
SOF1YLL011W BRR6P53062 197 aa3.62□□□□□ -1.83
SOF1YLL011W YGL039WP53183 348 aaKnown RBP3.62□□□□□ -1.83
SOF1YLL011W COG7P53195 279 aa3.62□□□□□ -1.83
SOF1YLL011W CRH1P53301 507 aa3.62□□□□□ -1.83
SOF1YLL011W SPG4Q04438 115 aa3.62□□□□□ -1.83
SOF1YLL011W SEI1Q06058 285 aa3.62□□□□□ -1.83
SOF1YLL011W YPR147CQ06522 304 aaKnown RBP3.62□□□□□ -1.83
SOF1YLL011W YET3Q07451 203 aa3.62□□□□□ -1.83
SOF1YLL011W WTM1Q12363 437 aaKnown RBP3.62□□□□□ -1.83
SOF1YLL011W SWI1P09547 1314 aa3.62□□□□□ -1.83
SOF1YLL011W YPR117WQ06116 2489 aa3.62□□□□□ -1.83
SOF1YLL011W COX5AP00424 153 aa3.61□□□□□ -1.83
SOF1YLL011W ZWF1P11412 505 aaKnown RBP3.61□□□□□ -1.83
SOF1YLL011W ASK1P35734 292 aa3.61□□□□□ -1.83
SOF1YLL011W YHL049CP38722 271 aa3.61□□□□□ -1.83
SOF1YLL011W SEN34P39707 275 aa3.61□□□□□ -1.83
SOF1YLL011W COG3P40094 801 aa3.61□□□□□ -1.83
SOF1YLL011W GAB1P41733 394 aa3.61□□□□□ -1.83
SOF1YLL011W ATG18P43601 500 aa3.61□□□□□ -1.83
SOF1YLL011W TMA22P47089 198 aaPredicted RBP3.61□□□□□ -1.83
SOF1YLL011W YJR054WP47114 497 aa3.61□□□□□ -1.83
SOF1YLL011W BIR1P47134 954 aa3.61□□□□□ -1.83
SOF1YLL011W OST3P48439 350 aa3.61□□□□□ -1.83
SOF1YLL011W SDS23P53172 527 aa3.61□□□□□ -1.83
SOF1YLL011W GTR2P53290 341 aa3.61□□□□□ -1.83
SOF1YLL011W YNL140CP53910 189 aa3.61□□□□□ -1.83
SOF1YLL011W ADD37Q03233 198 aa3.61□□□□□ -1.83
SOF1YLL011W SDC1Q03323 175 aa3.61□□□□□ -1.83
SOF1YLL011W BRX1Q08235 291 aaKnown RBP3.61□□□□□ -1.83
SOF1YLL011W YPL278CQ08990 100 aa3.61□□□□□ -1.83
SOF1YLL011W TPO4Q12256 659 aa3.61□□□□□ -1.83
SOF1YLL011W NAG1Q8TGN9 163 aa3.61□□□□□ -1.83
SOF1YLL011W GCY1P14065 312 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SOF1YLL011W RPB5P20434 215 aa3.6□□□□□ -1.83
SOF1YLL011W CAM1P29547 415 aaKnown RBP3.6□□□□□ -1.83
SOF1YLL011W CAF4P36130 643 aa3.6□□□□□ -1.83
SOF1YLL011W FRM2P37261 193 aa3.6□□□□□ -1.83
SOF1YLL011W SHG1P38337 142 aa3.6□□□□□ -1.83
SOF1YLL011W MCM22P47167 239 aa3.6□□□□□ -1.83
SOF1YLL011W TOS8P53147 276 aa3.6□□□□□ -1.83
SOF1YLL011W SCW4P53334 386 aaKnown RBP3.6□□□□□ -1.83
SOF1YLL011W YLR460CP54007 376 aa3.6□□□□□ -1.83
SOF1YLL011W YLR177WQ06251 628 aa3.6□□□□□ -1.83
SOF1YLL011W RRP40Q08285 240 aaKnown RBP3.6□□□□□ -1.83
SOF1YLL011W YNG1Q08465 219 aa3.6□□□□□ -1.83
SOF1YLL011W HNT3Q08702 217 aa3.6□□□□□ -1.83
SOF1YLL011W YOR376WQ08900 122 aa3.6□□□□□ -1.83
SOF1YLL011W GSC2P40989 1895 aa3.6□□□□□ -1.83
SOF1YLL011W TAO3P40468 2376 aa3.6□□□□□ -1.83
SOF1YLL011W YOL163WP0CF20 169 aa3.6□□□□□ -1.83
SOF1YLL011W MEI4P29467 408 aa3.6□□□□□ -1.83
SOF1YLL011W TRR1P29509 319 aaKnown RBP3.6□□□□□ -1.83
SOF1YLL011W SRY1P36007 326 aa3.6□□□□□ -1.83
SOF1YLL011W DRE2P36152 348 aa3.6□□□□□ -1.83
SOF1YLL011W FIG1P38224 298 aa3.6□□□□□ -1.83
SOF1YLL011W MDM31P38880 579 aa3.6□□□□□ -1.83
SOF1YLL011W YMR144WP40214 342 aaKnown RBP3.6□□□□□ -1.83
SOF1YLL011W YJL016WP47072 561 aa3.6□□□□□ -1.83
SOF1YLL011W CPR7P47103 393 aa3.6□□□□□ -1.83
SOF1YLL011W YGR015CP53208 328 aa3.6□□□□□ -1.83
SOF1YLL011W PDR17P53844 350 aa3.6□□□□□ -1.83
SOF1YLL011W FMP41P53889 259 aaKnown RBP3.6□□□□□ -1.83
SOF1YLL011W YML096WQ04489 525 aa3.6□□□□□ -1.83
SOF1YLL011W IZH2Q12442 317 aa3.6□□□□□ -1.83
SOF1YLL011W YCL021W-AQ96VH3 125 aa3.6□□□□□ -1.83
SOF1YLL011W ASP3-2P0CX77 362 aa3.59□□□□□ -1.84
SOF1YLL011W ASP3-3P0CX78 362 aa3.59□□□□□ -1.84
SOF1YLL011W ASP3-4P0CX79 362 aa3.59□□□□□ -1.84
SOF1YLL011W ASP3-1P0CZ17 362 aa3.59□□□□□ -1.84
SOF1YLL011W MRPL39P36533 70 aa3.59□□□□□ -1.84
SOF1YLL011W JID1Q12350 301 aa3.59□□□□□ -1.84
SOF1YLL011W MRX4Q12467 430 aa3.59□□□□□ -1.84
SOF1YLL011W YNL162W-AQ3E7A8 72 aa3.59□□□□□ -1.84
SOF1YLL011W CDC28P00546 298 aaKnown RBP3.58□□□□□ -1.84
SOF1YLL011W BGL2P15703 313 aaKnown RBP3.58□□□□□ -1.84
SOF1YLL011W CPT1P17898 393 aa3.58□□□□□ -1.84
SOF1YLL011W IMP1P28627 190 aa3.58□□□□□ -1.84
SOF1YLL011W SDH3P33421 198 aa3.58□□□□□ -1.84
SOF1YLL011W SEO1P39709 593 aa3.58□□□□□ -1.84
SOF1YLL011W YER186CP40101 306 aa3.58□□□□□ -1.84
SOF1YLL011W YIL012WP40551 113 aa3.58□□□□□ -1.84
SOF1YLL011W STB1P42845 420 aa3.58□□□□□ -1.84
SOF1YLL011W YJR056CP47115 236 aa3.58□□□□□ -1.84
SOF1YLL011W SYF2P53277 215 aaPredicted RBP3.58□□□□□ -1.84
SOF1YLL011W YPL113CQ02961 396 aa3.58□□□□□ -1.84
SOF1YLL011W NOC4Q06512 552 aaPredicted RBP3.58□□□□□ -1.84
SOF1YLL011W USB1Q12208 290 aaKnown RBP3.58□□□□□ -1.84
SOF1YLL011W FLO1P32768 1537 aa3.58□□□□□ -1.84
SOF1YLL011W CDC50P25656 391 aa3.57□□□□□ -1.84
SOF1YLL011W YOX1P34161 385 aa3.57□□□□□ -1.84
SOF1YLL011W YPT52P36018 234 aaKnown RBP3.57□□□□□ -1.84
SOF1YLL011W HMT1P38074 348 aa3.57□□□□□ -1.84
SOF1YLL011W ECM13P38195 257 aa3.57□□□□□ -1.84
SOF1YLL011W SHE1P38200 338 aa3.57□□□□□ -1.84
SOF1YLL011W PTH1P38876 190 aaKnown RBP3.57□□□□□ -1.84
SOF1YLL011W YFH7P43591 353 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 104.3 ms